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Entry information : EsilMSD02(Esi_0002_0116)
Entry ID 16943
Creation 2021-01-30 (Christophe Dunand)
Last sequence changes 2021-01-30 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2021-01-30 (Christophe Dunand)
Peroxidase information: EsilMSD02(Esi_0002_0116)
Name EsilMSD02(Esi_0002_0116)
Class Mn SOD    [Orthogroup: MSD001]
Taxonomy Eukaryota Phaeophyceae Ectocarpaceae Ectocarpus
Organism Ectocarpus siliculosus    [TaxId: 2880 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EsilMSD02
start..stop		 S start..stop
KflMSD01 272 1.35e-93 9..230 4..226
MpMSD01 272 3.13e-93 4..224 15..232
MpalMSD01 269 4.95e-92 32..224 34..225
AtMSD01 262 1.92e-89 6..223 3..224
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 618099..618112 12 N° 2 617736..617904 167 N° 3 616236..616376 139 N° 4 615648..615848 199
N° 5 614664..614831 166  
complement(join(614664..614831,615648..615848,616236..616376,617736..617904,6180 99..618112))


exon

Literature and cross-references EsilMSD02(Esi_0002_0116)
Protein ref. GenBank:   CBJ48355.1
DNA ref. GenBank:   FN648375.1 (618112..614664)
Protein sequence: EsilMSD02(Esi_0002_0116)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   230
PWM (Da):   %s   24814.52 Transmb domain:   %s   i184-206o216-238i300-322o337-359i
PI (pH):   %s   7.27
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MMFSRVACNAARRVPSAGRMISSSAAARAPAVLPDLTYDYGELEPAISGEIMKIHHTKHHAYINNLNAAMEKLADAEAKGDVTAILQLQAAIKFNGGGHLNHSIFWKNLAPVGKGGGEMV
TGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAIATCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAATS*

Retrieve as FASTA  
Remarks
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATGTTTTCGAGGTAAGAGTGTTGCATACCCTACACCACGGTATTCGCATCCCGATAGCGCCAGTTTACCTCCAGGAAAGTTCGTGGCGGGTGAGTTTTGGCTCTACAAAAATATGCA
TGGGCTCCACGTTCCTTTCCGCACTTGACATCTTGCTTCTTGCCCCGCCTCCCCCCGCCGTTGTTGTGCAACTTGCTTTGGTGAGCAGGGGGTTGCATGCAATGCTGCACGTCGCGTCCC
TTCGGCGGGGCGCATGATCTCTTCGTCGGCTGCGGCAAGGGCGCCAGCGGTGTTGCCCGACCTGACGTACGACTACGGCGAGCTTGAGCCCGCTATCAGCGGCGAAATAATGAAAATTCA
CCACACCAAGCACCACCAGGTCGGTTCGATCTGTTCGGTTGCCGTACACTTGCCTTACACGGAAGCGTCCATGGGTGACGCAAGAGTGTTGATGTTCTCGATCTGGAAAGTTGTTTGTGG
CTATGCCTTTTTATGCACAGCCAGAGGAGAGAGAGCGAAGCATTCGGTGTGGACACTTACTGGTGGTTGGTGATCGGATGTTGTGTTGTTGACTCACATCGGGCGCCGTGTGCGGGGTGT
AAGGCATCAACCACACCAGCTCTACCTTCATAACAGCCCGCTTCGTGCGACAACATGACACAACATGACACAACATGACAACATGACAACATGACACAACATGACAACATGACAACACGA
CACAACATGACAACATGACACAACATGACAACATGACAACATGACACAACATGACAACATGACAACATGACGTGCGGTCACCCAGGATGGTCGCCGCCAAGCGGGCACGGCACGTGGGAC
ACCCTTCCCTTCGAAAGGAGACGCATCACAACTTTTTCAAAGGAGATAACCACGTCGTTGACTCTAGGGCGGCTCATTTCTATTTCTTCCCCAGGCGCTACTGCTGTTCCACGAATGGTG
TACATACCGGTAAATCCCATAAGAGGATGAAAACCCCCAGGGGATGAAAACCCCGCCCGACCAACCACCAACACTAGAGAAAAGCACAAATTGAGGGGGATATTGTTGTATCGTTGCCTT
TTCAAAGTAGGGGAAGAGGAGATACTGGATGAAGTTTACGGTTGTTTTTTCATGCGAACGGAGACATGAACGGCAATAGCAGCATTCAACAACACCATCACCACCAACAACAACACGAAC
ACGGTGGAATATATGACTGTTGTTGTGGAAGAGCCCCGCACTTGGATGTTGAGAACCTCGACGGGAAGCACTGGTGGTGTTTGTTGCTTGACGACCAGTCCGCCAAGCGCAGTACAAAAA
TGCTACCCTTTTGCCAGTGGGTGTATGTCCTTGAGAACAGCGTGTGTTAAACGCAATATTACCAAGTTATGCCTCGCAGGACAGCAGTACTTTACGTGCTGCTCCTGTCGTGGCGCGACT
ATTCATTGCGAGACGAAAATAAACGCCATCGACGCTTAGGACTGCTACTCTGTGCGGCCCGCTTCGTTGCCCATTCTGCTGCTCTCCGTACCCGCGGTCATCAAGTTTTGATCCGTGCAG
CAGTGACGCTAACACTACTCCCATATGATTCCACAACGAGTAATGGTGGTGATGCTTCTGGATTGTGGAGTACCGCGCTGGAAGGCTCAGCGCTACAGGTCGTGGATTTTGGGACTGCTT
TGTCACCCCGCGTACCTTTTTTCGGCTGGAATTGGAACTGCTCCTTTGAAATTGTCAGGCGCGTATATCAACAACCTGAACGCGGCGATGGAGAAGCTGGCAGATGCGGAGGCGAAGGGA
GACGTGACCGCTATCCTTCAGTTGCAGGCCGCCATCAAGTTCAACGGCGGCGGCCACCTCAACCACTCCATCTTCTGGAAGGCAAGGGGGAGAGCGAGAGGCGGGGAGAGAGAGTTCAAG
AGTTTACCACCTTTGATAGCTGTGATCGTGGAGCTGGCTGCCCTGTCACCGGAGTTTCCCAATACCTTGGGCCACCTTAGGTTGTTTGTCCCAATGAGTGCGCGGTTGTTTGGCAGCGTG
GCGCTCAAGAAGATACGGAACATGAGGGAGGGGCCGTATTGTCTCGGTTGCGTTTTTTTCTTCTTTCGTGTTTTGTGTTTTGTGTTAAATGGCCGCTAGACGTGACCATGCTCCAGAGGA
CCTCGTGCTAGTATGTTTAGGAGCACAGAGACCCCAGAACATGTCGATACGCTTTCGAGACTTGACCGCTAGGTCCTCTAAGACTCGCACTCCGCCCTTCCCTCGCAGAAAACTTGGCGC
CCGTGGGCAAGGGGGGGGGGGAGATGGTAACCGGCACCCTGGCGGACATGATCGAGGCGCAGTACCACTCGATGGGAGAGCTCACTGAGAAGATGAGCGCGGCGTCGGTGGGCGTCCAGG
GGTCCGGGTGGGGGTGGCTTGGCTACGACAAGGTCAACAAACGGTTAGCAATCGCCACCTGCGCCAACCAGGTTTGTGTGTGTTGTATGAGCTGGACACATTTGCTGCGGGTAGGTTGTA
GACAAGTCCCCCCGAGAAGCCATGAGTCGCTTGATGCCGTGTATGAACCAGAAACGCAAGGAGAGGCCCAGCAACTCTTTCACCGGTTCAAGCGATACAAAGTTCATGTGAAGGCCGACC
CCAACGTGGCACTTCGCGAGTGGGAACAAACAACTTTACGGCATCAAGCGACTCCATGGCTTCTCGGGGGGACGGGTGTTGTTTCTCTTTGGGTCCGCCGCGTGATGTAGATTAAAGGGG
TGCCATTTGTGTTTTTCTCGTGGTGTTGTGAAAGGGATGGGGTTGGCGGGTTCTGTCGACGTTTGGGCTCTGTGGCGTGTACCCCGTGATCTATTGGTTCCATTTTGTTTTTTGTTGTGT
GCTGGGGTTGTCTTGCAGTCAGCTACGCCCCCGAACTGTTGGTTGTGTGGATATGCCAATCGTATTCAACCGTTTCTACTACTACTGTACTTCCACAGCAGTGTGCCGAGAAGTTTGCCC
CTCGGACATTTTTTCGTGGACGCAAGCGAGTGCGGTACCGAACCAACGTCGTTCGTTGCTCTTCCGTCGGTTCGAATTCGACCCCACTAGTTAGGCCTGATCCTTCATTCTGTTAGCTTT
TGTTGCCCAGCCATGAAACACATTTGTTGCGCTGTTGGGTGTGTAAAAGTGTAAAAAGGACAGGATCTCGAGCGAGTCGAGCACGCGCAACAGCAGCGCGAAAACGAGGACCTGACACCC
TCTCACCCTCGATGTCATCTCCACCCCGGTCATGTTTGATTGTACAGGAGACCCGCTGGAGGCTACAACCGGCCTCGTGCCCTTGCTAGGGATCGACGTGTGGGAGCACGCGTACTACCT
CCAGTACAAGAACGTCAGGCCCGACTACGTCAAGAGCATCTTCAAGGTGGTCAACTGGGCGGACGTTCAGGAGAGGCTAACCGCGGCGACATCCTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATGTTTTCGAGGGTTGCATGCAATGCTGCACGTCGCGTCCCTTCGGCGGGGCGCATGATCTCTTCGTCGGCTGCGGCAAGGGCGCCAGCGGTGTTGCCCGACCTGACGTACGACTAC
GGCGAGCTTGAGCCCGCTATCAGCGGCGAAATAATGAAAATTCACCACACCAAGCACCACCAGGCGTATATCAACAACCTGAACGCGGCGATGGAGAAGCTGGCAGATGCGGAGGCGAAG
GGAGACGTGACCGCTATCCTTCAGTTGCAGGCCGCCATCAAGTTCAACGGCGGCGGCCACCTCAACCACTCCATCTTCTGGAAGAACTTGGCGCCCGTGGGCAAGGGGGGGGGGGAGATG
GTAACCGGCACCCTGGCGGACATGATCGAGGCGCAGTACCACTCGATGGGAGAGCTCACTGAGAAGATGAGCGCGGCGTCGGTGGGCGTCCAGGGGTCCGGGTGGGGGTGGCTTGGCTAC
GACAAGGTCAACAAACGGTTAGCAATCGCCACCTGCGCCAACCAGGACCCGCTGGAGGCTACAACCGGCCTCGTGCCCTTGCTAGGGATCGACGTGTGGGAGCACGCGTACTACCTCCAG
TACAAGAACGTCAGGCCCGACTACGTCAAGAGCATCTTCAAGGTGGTCAACTGGGCGGACGTTCAGGAGAGGCTAACCGCGGCGACATCCTAA

Retrieve as FASTA