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Entry information : ZmPrx13(Zm00001d028349 / GRMZM2G116902)
Entry ID 176
Creation 2009-01-13 (Christophe Dunand)
Last sequence changes 2009-01-13 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2023-01-09 (Christophe Dunand)
Peroxidase information: ZmPrx13(Zm00001d028349 / GRMZM2G116902)
Name ZmPrx13(Zm00001d028349 / GRMZM2G116902)
Class Class III peroxidase    [Orthogroup: Prx029]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea
Organism Zea mays    [TaxId: 4577 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ZmPrx13
start..stop		 S start..stop
SbPrx19 567 0 1..334 1..332
SiPrx153 548 0 28..334 28..332
BdiPrx45 514 0 19..334 22..334
TaPrx84-1D 507 0 9..334 5..329
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 31250778..31251014 235 N° 2 31250416..31250598 181 N° 3 31250134..31250299 164 N° 4 31249577..31249995 417
complement(join(31249577..31249995,31250134..31250299,31250416..31250598,3125077 8..31251014))


exon

Literature and cross-references ZmPrx13(Zm00001d028349 / GRMZM2G116902)
Literature REFERENCE 1 Duvick,J.P., Maddox,J.R., Navarro Acevedo,P.A. and Simmons,C.R. Maize peroxidase genes and their use for improving plant disease resistance and stalk strength.
REFERENCE 2 Collura,K., Wissotski,M., Campos,D., Kudrna,D., Golser,W., Ashely ,E., Haller,K., Wing,R., Soderlund,C., Walbot,V. and Yu,Y. Maize Full-length cDNA Project.
DNA ref. GenBank:   AC190506.1 (1453455..143987)
EST ref. GenBank:   EC900397 [5' end]
Cluster/Prediction ref. UniGene:   Zm.37967
Protein sequence: ZmPrx13(Zm00001d028349 / GRMZM2G116902)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   334 (302)
PWM (Da):   %s   34792.18 (31526.5) Transmb domain:   %s   i13-30o (i13-30o)
PI (pH):   %s   5.7 (5.07) Peptide Signal:   %s   cut: 33 range:33-334
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MERKSFSCRDTASCLALLAVALCLGAATVARGQLTDDFYDDCCPQ
AENIVRARVSAAMKAEPRMGASLLRLHFHDCFVNGCDGSILLDGNNTEKLAGPNLNSARGFDVVDAIKADLEKACPGVVSCADILAIAAKYGVLLSGGPDYDVLLGRRDGLVANQSGANSNLPSPFDPISTITKKFSDVGLNTTDVVVLSGGHT
IGRARCVLFSGRLANFSATSSVDPTLNASLASSLQALCRGGDGNQTAALDDGSADAFDNHYYQNLLGQRGLLSSDQGLFSSTDGSAATTRALVQAYSASSERFFCDFGRSMLKMGNILPL
TGSAGQIRSNCRAIN

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, 3 introns) and 3 ESTs. Cultivar="B73".
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGCGCAAATCATTCTCCTGCAGAGACACTGCGAGCTGCCTCGCCCTGCTCGCCGTCGCGCTGTGCCTCGGCGCCGCCACGGTGGCGCGGGGCCAGCTGACGGACGACTTCTACGAC
GACTGCTGCCCCCAGGCGGAGAACATCGTGAGGGCGCGCGTGTCCGCCGCGATGAAGGCCGAGCCCCGCATGGGCGCCTCCCTGCTCAGGCTCCATTTCCACGACTGCTTCGTCAACGTA
CGTACGATGATCAAGACGCCACGCACACGCGCTCTGTTCTGTTGAGAGTCATGCGGGCACACAGCGCGAGTGCTCCCAGTCTTGAGCCTAGCTAACTCCCAGCTAAGTATATATGTGTAC
CGAATATTTGGTCGCTGAAAAGGACTTGCTCGCTGCATGCACGCACGTACACGCAGGGGGGTGCGACGGGTCGATCCTGCTGGACGGGAACAACACCGAGAAGCTGGCGGGGCCGAACCT
GAACTCGGCGCGCGGCTTCGATGTCGTCGACGCCATCAAGGCCGACCTCGAGAAGGCGTGTCCCGGGGTCGTCTCCTGCGCCGACATCCTCGCCATCGCGGCAAAGTACGGAGTGCTGCT
GGTGCGTCCCTTCCCTCATGATTTCAGTACTACGATACTTGGTGCTTGGGGCCGGCCATGCATCCATAGATCCGTCGCGCTGAAAAAGAAAACCTGTACTGTACTGTACTGACGCAGAGA
GCGGAGGGCCGGACTACGACGTGCTGCTGGGAAGGAGGGACGGCCTGGTGGCAAACCAGTCCGGCGCCAACAGCAACCTGCCTAGCCCGTTCGATCCCATCAGCACCATCACAAAGAAGT
TCAGCGATGTGGGTCTCAACACAACCGACGTGGTCGTTTTATCAGGTACCGTAGTACGCATCTTAATTTCACTGCACAACACTACTTCGTCCCTCTCCGTCCCTACTAGCTGAACTGACC
TGGCGTCAGTAAGAGCGATGATGGTGACTGCATAACTAACTGGACGGACGGACACGCACGCAGGAGAGGCCACACGATCGGGCGAGCGCGGTGCGTGCTGTTCAGCGGCCGGCTGGCCAA
CTTCTCGGCGACGAGCTCCGTGGACCCGACGCTGAACGCGTCCCTGGCGTCCAGCCTGCAGGCGCTGTGCCGGGGCGGGGACGGCAACCAGACGGCGGCGCTGGACGACGGCTCCGCCGA
CGCGTTCGACAACCACTACTACCAGAACCTGCTGGGCCAGAGGGGCCTCCTGTCCTCCGACCAGGGCCTCTTCTCCAGCACCGACGGCAGCGCGGCCACCACCAGGGCGCTCGTCCAGGC
CTACAGCGCCAGCAGCGAGCGCTTCTTCTGCGACTTCGGCAGGTCCATGCTCAAGATGGGCAACATCCTCCCGCTCACCGGCTCCGCCGGCCAGATCCGCAGCAACTGCCGTGCCATCAA
CTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGCGCAAATCATTCTCCTGCAGAGACACTGCGAGCTGCCTCGCCCTGCTCGCCGTCGCGCTGTGCCTCGGCGCCGCCACGGTGGCGCGGGGCCAGCTGACGGACGACTTCTACGAC
GACTGCTGCCCCCAGGCGGAGAACATCGTGAGGGCGCGCGTGTCCGCCGCGATGAAGGCCGAGCCCCGCATGGGCGCCTCCCTGCTCAGGCTCCATTTCCACGACTGCTTCGTCAACGGG
TGCGACGGGTCGATCCTGCTGGACGGGAACAACACCGAGAAGCTGGCGGGGCCGAACCTGAACTCGGCGCGCGGCTTCGATGTCGTCGACGCCATCAAGGCCGACCTCGAGAAGGCGTGT
CCCGGGGTCGTCTCCTGCGCCGACATCCTCGCCATCGCGGCAAAGTACGGAGTGCTGCTGAGCGGAGGGCCGGACTACGACGTGCTGCTGGGAAGGAGGGACGGCCTGGTGGCAAACCAG
TCCGGCGCCAACAGCAACCTGCCTAGCCCGTTCGATCCCATCAGCACCATCACAAAGAAGTTCAGCGATGTGGGTCTCAACACAACCGACGTGGTCGTTTTATCAGGAGGCCACACGATC
GGGCGAGCGCGGTGCGTGCTGTTCAGCGGCCGGCTGGCCAACTTCTCGGCGACGAGCTCCGTGGACCCGACGCTGAACGCGTCCCTGGCGTCCAGCCTGCAGGCGCTGTGCCGGGGCGGG
GACGGCAACCAGACGGCGGCGCTGGACGACGGCTCCGCCGACGCGTTCGACAACCACTACTACCAGAACCTGCTGGGCCAGAGGGGCCTCCTGTCCTCCGACCAGGGCCTCTTCTCCAGC
ACCGACGGCAGCGCGGCCACCACCAGGGCGCTCGTCCAGGCCTACAGCGCCAGCAGCGAGCGCTTCTTCTGCGACTTCGGCAGGTCCATGCTCAAGATGGGCAACATCCTCCCGCTCACC
GGCTCCGCCGGCCAGATCCGCAGCAACTGCCGTGCCATCAACTGA

Retrieve as FASTA