1. Browse the Database
  2. View Redoxidase
Entry information : SpPrx02
Entry ID 1765
Creation 2007-09-20 (Christophe Dunand)
Last sequence changes 2007-09-20 (Christophe Dunand)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2011-01-28 (Qiang Li)
Peroxidase information: SpPrx02
Name SpPrx02
Class Class III peroxidase     [Orthogroup: Prx013]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Sorghum
Organism Sorghum propinquum    [TaxId: 132711 ]
Cellular localisation N/D
Tissue type Rhizomes
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpPrx02
start..stop		 S start..stop
SbPrx55 667 0 4..346 3..344
ZmPrx84 563 0 2..346 2..346
ZmPrx65 518 0 11..346 8..343
SiPrx11 511 0 33..346 36..347
Literature and cross-references SpPrx02
Literature Cordonnier-Pratt,M.-M., Gingle,A., Sudman,M., Marsala,C. and Pratt ,L.H. An EST database from Sorghum: floral-induced meristems.
EST ref. GenBank:   BG102328 [5' end]  BG053053 [3' end]  BG053123 [Fragment]
Protein sequence: SpPrx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   346
PWM (Da):   %s   34781.53 Transmb domain:   %s   i21-43o
PI (pH):   %s   8.94
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ARGRQTAASG GRWRGGDGSV AAAWWVGVVV LGGHLLSCAQ AGLLESNPGL AYNFYQKSCP SVDSIVRSVT WAQVAANPAL PARLLRLHFH DCFVKGCDAS ILLDNAQSEK TAAPNLSVGG  YEVIDAIKAQ LEKACPGVVS CADILALAAR DAVSYQFKSS LWQVETGRRD GTVSLASNTG TLPSPFAGFA GLLSSFANRG LNLTDLVALS GAHTIGVASC SSVTPRLYQG xxxxxxxxxx 
xSAYAKTLMS SCPNPSPAAA TVGLDGGSPF KFDSGYYARV QQNQGTLASD AALAQNAAAA QMVADLTNPI KFYAAFSMSM KKMGRVEVLT GTNGQIRKQC RQVNTS 

Retrieve as FASTA  
Remarks Partial sequence from 7 ESTs. No overlap between 5' and 3' end but compiled based on homologies with S.bicolor sequence.