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Entry information : SpPrx07
Entry ID 1770
Creation 2007-09-20 (Christophe Dunand)
Last sequence changes 2007-09-20 (Christophe Dunand)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2011-01-28 (Qiang Li)
Peroxidase information: SpPrx07
Name SpPrx07
Class Class III peroxidase     [Orthogroup: Prx054]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Sorghum
Organism Sorghum propinquum    [TaxId: 132711 ]
Cellular localisation N/D
Tissue type Rhizomes
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpPrx07
start..stop		 S start..stop
SbPrx07 575 0 1..347 1..338
ZmPrx31 539 0 1..347 2..340
SiPrx147 427 7.51e-151 24..347 25..341
SiPrx149 420 4.34e-148 1..347 1..342
Literature and cross-references SpPrx07
Literature Cordonnier-Pratt,M.-M., Gingle,A., Paterson,A., Sudman,M. and Pratt, L.H. An EST database from Sorghum: Sorghum propinquum rhizomes.
EST ref. GenBank:   BG465579 [5' end]  BG241449 [3' end]
Protein sequence: SpPrx07
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   347 (317)
PWM (Da):   %s   31478.46 (28682.1) Transmb domain:   %s   i12-34o
PI (pH):   %s   5.93 (5.28) Peptide Signal:   %s   cut: 31 range:31-347
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASSSPHRAA VVAGVLLVAA AALCSCSAMA QLTADYYDCT CPDAYNIVKN VLIEAHKSDV RIYASLTRLH FHDCFVQGCD GSVLLDALPG VANSTEKLAP ANNNSARGFP VVDKVKAALE  DACPGVVSCA DILALAAEIS VELSGGPKWS VLLGRLxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxSGAH TFGRVQCQFV TSRLYNFSGT GRPDPTLNGG 
YRAFLTQRCP LNGNGSALND LDPTTPNLFD NHYYTNLEVN RGFLNSDQEL KSSPPAQGVT APIVDQFASS QDAFFDNFAR SMINMGNIQP LTDPSKGEVR CNCRVAN 

Retrieve as FASTA  
Remarks Sequence from 4 ESTs. No overlap between 5' and 3' end but compiled based on homologies with s.bicolor sequence.