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Entry information : SpPrx09
Entry ID 1772
Creation 2007-09-19 (Christophe Dunand)
Last sequence changes 2007-09-19 (Christophe Dunand)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2011-01-28 (Qiang Li)
Peroxidase information: SpPrx09
Name SpPrx09
Class Class III peroxidase     [Orthogroup: Prx002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Sorghum
Organism Sorghum propinquum    [TaxId: 132711 ]
Cellular localisation N/D
Tissue type Meristems
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpPrx09
start..stop		 S start..stop
SbPrx12 290 5.17e-98 144..284 185..325
SbPrx12 228 6.51e-74 1..110 1..110
ZmPrx05 270 1.57e-90 144..284 179..319
ZmPrx05 183 2.39e-56 6..110 1..105
SiPrx164 241 3.71e-79 144..284 184..323
SiPrx164 198 3.77e-62 1..110 1..109
TaPrx36-1A 222 1.62e-71 144..283 194..333
TaPrx36-1A 171 8.06e-52 11..110 14..119
Literature and cross-references SpPrx09
Literature Cordonnier-Pratt,M.-M., Gingle,A., Sudman,M., Marsala,C. and Pratt ,L.H. An EST database from Sorghum: floral-induced meristems.
EST ref. GenBank:   BF588081 [5' end]  BF587525 [3' end]
Protein sequence: SpPrx09
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   284 (342)
PWM (Da):   %s   26198.01 (37874.6)  
PI (pH):   %s   5.64 (9.87) Peptide Signal:   %s   cut: 23 range:23-364
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAVQRMEVLY LQVAAVAALL MATELRAQLR VGFYDNSCPA AEIIVQQEVS TAVAANPGIA AGLLRLHFHD CFVGGCDASV LIDSTKGNTA EKDAGPNTSL RGFEVIDRIK xxxxxxxxxx  xxxxxxxxxx xxxxxxxxxx xxxQKEMVIL SGAHTIGSSH CSSFSGRLSS SATTAGQDPT MDPAYVAQLA RQCPQAGGDP LVAMDYVSPN AFDEGFYKGV MANRGLLSSD QALLSDKNTA 
VQVVTYANDP ATFQSDFAAA MVKMGTVGVL TGASGKIRAN CRVA 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs. No overlap between 5' and 3' ends but compiled based on homologies with S. bicolor sequence.
Floral-Induced Meristem 1 (FM1).