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Entry information : SpPrx25
Entry ID 1788
Creation 2007-09-19 (Christophe Dunand)
Last sequence changes 2007-09-19 (Christophe Dunand)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2011-01-28 (Qiang Li)
Peroxidase information: SpPrx25
Name SpPrx25
Class Class III peroxidase     [Orthogroup: Prx147]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Sorghum
Organism Sorghum propinquum    [TaxId: 132711 ]
Cellular localisation N/D
Tissue types Meristems
Rhizomes
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpPrx25
start..stop		 S start..stop
SbPrx99 524 0 1..300 2..336
ZmPrx85 461 3.53e-165 1..300 1..330
SiPrx89 392 8.08e-138 39..300 35..331
SbPrx101 214 5.37e-68 13..299 7..314
Literature and cross-references SpPrx25
Literature Cordonnier-Pratt,M.-M., Gingle,A., Sudman,M., Marsala,C. and Pratt ,L.H. An EST database from Sorghum: floral-induced meristems.
EST ref. GenBank:   BG465811 [5' end]  BG559019 [3' end]
Protein sequence: SpPrx25
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   301 (280)
PWM (Da):   %s   28771.49 (26788.4) Transmb domain:   %s   i7-29o
PI (pH):   %s   5.61 (5.26) Peptide Signal:   %s   cut: 22 range:22-301
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSGSRVLFVV AAAVGVLLAA AAVSSGPVVV PLATGRPGAG GNDELSVYFH VESCPQLETI VRSAVDAALQ QNVRLTAGLL RVFFHDCFPQ GCDASILLDN GERGLPPNVG LQQEAVQLVE  DIRAKVHAAC GPTVSCADIT VLAxxxxxxx xxxxxxxxxx xxxxxxxxxx SGAHTVGKAR CSSFGDVAGP ATDDITRCVT ATCSAAGAGD TLRDLDFLTP AVFDNLYFIE LTLKKNKGVM 
LPSDQGLATD PRTSWLVQGF ADNHWWFFDQ FGTSMVKMSQ LKGPQGNVGE IRRNCLRPNT G 

Retrieve as FASTA  
Remarks Complete sequence from 5 ESTs (BG241549). No overlap between 5' and 3' ends but compiled based on homologies with S. bicolor sequence. Floral-Induced Meristem 1 (FM1), Rhizome2 (RHIZ2).