Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
321 (300) |
| PWM (Da): |
34929.35 (32785.0) |
Transmb domain: |
o437-456i580-602o622-644i794-811o |
| PI (pH): |
9.88 (9.79) |
Peptide Signal: |
cut: 22 range:22-321 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAIKNLLPLL VLLSIVGVSV AQKGLGLNYY KHRCPDAEAI ARRVTIQYVS RQTSLAAALL RMHFHDCFVR GCDGSILLKS ANNDAERNAF PNLSLRGFEV VDAVKSALEK KCPGVVSCAD
VLSLVARDAV SVVNGPWWPV PLGRRDGRIS KLSEVNLPSP FAGIATLKQN FFAKGLNTKD LVVLSGGHTI GISSCGLINS RIYNFTGKGD FDPAMNPSYV RLLKQRCKPT DFKTSVEMDP
GSVKKFDSHY FNIVAQKKGL FISDSTLLDD SETKRYIETQ VATAGSSFAK DFSDSMLKLG LVEILTGKKG EIRKRCAFVN N
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Retrieve as FASTA
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| Remarks |
Scf4280_1094 to 2245, 20 last AA identical have been found on the border, Scf4280_3_65 |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TACGAGATTT CAGCTTCGGA TTATGATTGA GCCAAACAAT TTCTTCTCAT TATGTTCTTT TATTTTTTGG TGAAGTGTTT TCACAGTCGA GAGTTTCATA CTTTTCTTGG TTCGATGTTT
TCACTCTTAT CTTTCTGTTT ATCTTTACTC ATCAATGTAA CCGTCTCTGG TTATTCTTAA TTCAATGCAA CTGTTTTCTA TTGTTCTATC GTAACCTAGT AGTCCAACTA CTCTCTCTCC
CTCTTGCTAT TATAAGTACA ATATAATTTA ATAATGACTA AACAAAAAGT GAGGATAATA CTATAATTTT GTTTAAAATA CTATTTACTT CACTCTAAAG GAAGAAACGT TAATATTTTT
ACTCTACTTA AAAGTCGCTG ATTTTTTTTT TTTCAATTTT TTTTTGTTCA CACTCTCTCC ATTCCCAATC ATCCCCAAAT GCTTTTTTCC GACAAATTTC TGCTAATCAC AGATGTTCTT
TTGTTATTTA GTGAAGTCTT TTTACATATT AGAGTTTTCA TTAGGCTAAG GCCCCTAAAA TGATTCTACA TTTTGTTTGT TATCTTTCAT AATATTAATT GTGTTTTCAC ATTTTTGAAA
TAATGATTCG GCTACATATA TATCTATCGT GCTTGCGTTT AAGGTTTGCA TTAAGTGTTT ATGTTGGTAT TTCACTTTTT CAGTTTGGTT GAAAAAACTA TAAATCGAGA TTATGTTCTA
TTTTCTGTAC CATAAATCTA ATGAGGGTAA GGAGTTAAGG AGCCAAAGGA TGGTCAATGG CTCAATAGTA ATTTATAAAT AAGAACAAAA AAGATAATGC AGAAGGCAGA CCAAGAAGAC
GGACGTGTGT TCCACACATG ACAACAAATT GTTTACAGTT AAGAAACAAT AAAATAAAAA TATTTAGAGC TGATGTCAAT GACAACAAAC CTTGAACCTG GTTTTGATTA AATTAAAACA
ATTTTTTTTT AACAATAAAA AACAGAGCTT TCTTTCCCCC ACTCAATTAC AGATAGTGCA AACAAGTATC TCAAAGTCAA TAGGAGTGCA AACAAGTATC ACAAAGTCAA TAGCTTTCCC
TAAGAGCAAA ACAAAAAGTT GACGAGAATC ATAAAGATCG TGGAGGCCCT GTAGTGTCCT CCTCTACCTC TGTTAATCAA ACGTAACTAA GAAACATAGG GAATACTGCA AATGGGTTTA
TCTTAATCCC ATTTAACATT TCTCCATGGA ATTTTTCAAT GTCTCAGGAC GTTTCTATAA AATGCCAGAG ACTGTCTCCT TCATATTCAT CTCCAAACTC GTCCTGACCT TTCTTGGCTA
ACACATAACA AAGCAAACGA GCTAAGAAAG GAAAGAGACA GTAATGGCGA TCAAGAACCT TCTCGCCCTT GTGGTTCTTC TTAGCTTCGT TGGAGTTTCT GTTGCCATTC CAAGGTTTAT
CCTTAACCTC AACTACTACA AGTCTAAGTG TCCCGACACA GAACGCATTG TCCGTCGTGT CACAGAACAA TATGTTTCTC GCAATCCAAG CCTTGCCGCT TCGCTTCTAA GGATGTATTT
CCATGATTGT TTTGTCAGAG TAAGCTTGCT TCACTTGTAC GCTTCTTCGA AACTATAACA ATGGAAATGA AAAACTAGTC CTAACTTTTA ATTATTATGA TTCATGTAGG GATGTGATGG
TTCAGTTCTT CTGAAGTCTG CAAACAATGA TGCTGAAAGA AACGCAATCC CCAACTTGAC CCTGAGAGGC TTTGAAGTGA TCGATGCCGT CAAGTCAGCG CTCGAGAAGA AGTGTCCCGG
TGTAGTTTCT TGCGCCGATG TTCTTGCCTT GGTCGCCAGA GATGCTGTTG CAGCGGTAAC ATTTTGGCAT CGGAATGATT AGTTCTCACT CCAAAACTAA GAGTACGAGT ACTAAAACTT
GTAATGGTTT GCCTTGTAAC AGATCAGGGG ACCATGGTGG CCGGTTCCAT TGGGGCGGAG GGATGGACGC ATCTCAAGAA
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Retrieve as FASTA
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DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCGATCA AAAACCTTCT TCCCCTTTTG GTTCTTCTTA GCATTGTTGG AGTTTCAGTT GCTCAAAAGG GTCTTGGCCT TAACTACTAC AAACACAGGT GTCCAGACGC AGAAGCCATT
GCCCGTCGTG TCACAATTCA ATATGTTTCT CGCCAGACGA GCCTTGCAGC GGCGCTTCTA AGGATGCATT TTCATGATTG TTTCGTCAGA GTAAGTTTGC TTCTTTGAAA CTATATTAAT
GGATATGATA AATTATTCCT AACTCTTAAA TACGTATGAT TCATGTAGGG ATGTGATGGT TCCATTCTTC TGAAGTCTGC AAACAATGAC GCGGAAAGAA ATGCATTCCC CAACCTGTCC
CTTAGAGGCT TCGAAGTGGT CGATGCCGTC AAGTCAGCGC TAGAGAAGAA GTGCCCCGGT GTCGTTTCTT GCGCTGATGT TCTCTCCTTA GTCGCCAGAG ACGCCGTCTC AGTGGTAACA
TTTTCAAACT AAACTGATTT AATTCTCATT GAAAAATTAT TGAAATTAAA ACTTGTTTTT GTTGCCTTTA AACAGGTCAA CGGACCATGG TGGCCAGTTC CATTGGGCCG TAGGGATGGT
CGCATCTCAA AGCTCTCTGA GGTTAATTTA CCATCTCCTT TCGCCGGAAT AGCTACACTG AAACAGAACT TCTTCGCCAA GGGTCTTAAC ACTAAAGACC TTGTCGTTCT CTCAGGTGTA
TATATATTGC TACAAATACG TTCAAAGTTA TTACATAGTT GAATACTAAT AATGGTTTCT TGAGCAGGGG GTCACACCAT TGGAATCTCT AGCTGCGGTC TCATCAACAG CCGTATCTAC
AACTTCACCG GCAAGGGAGA TTTTGACCCA GCCATGAACC CTAGCTATGT CAGGTTATTG AAGCAAAGGT GCAAGCCCAC TGACTTCAAG ACCTCAGTGG AGATGGACCC AGGCAGTGTC
AAGAAGTTTG ACTCTCACTA CTTCAACATT GTGGCTCAAA AGAAGGGTTT GTTCATCTCT GACTCAACAC TTCTCGATGA CTCTGAGACC AAAAGATACA TCGAGACACA GGTTGCTACT
GCTGGCTCTT CATTCGCCAA AGATTTCTCT GACTCGATGC TCAAACTTGG TTTGGTCGAA ATCCTCACCG GGAAAAAGGG TGAGATCAGG AAGAGATGCG CCTTCGTTAA TAACTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCGATCA AAAACCTTCT TCCCCTTTTG GTTCTTCTTA GCATTGTTGG AGTTTCAGTT GCTCAAAAGG GTCTTGGCCT TAACTACTAC AAACACAGGT GTCCAGACGC AGAAGCCATT
GCCCGTCGTG TCACAATTCA ATATGTTTCT CGCCAGACGA GCCTTGCAGC GGCGCTTCTA AGGATGCATT TTCATGATTG TTTCGTCAGA GGATGTGATG GTTCCATTCT TCTGAAGTCT
GCAAACAATG ACGCGGAAAG AAATGCATTC CCCAACCTGT CCCTTAGAGG CTTCGAAGTG GTCGATGCCG TCAAGTCAGC GCTAGAGAAG AAGTGCCCCG GTGTCGTTTC TTGCGCTGAT
GTTCTCTCCT TAGTCGCCAG AGACGCCGTC TCAGTGGTCA ACGGACCATG GTGGCCAGTT CCATTGGGCC GTAGGGATGG TCGCATCTCA AAGCTCTCTG AGGTTAATTT ACCATCTCCT
TTCGCCGGAA TAGCTACACT GAAACAGAAC TTCTTCGCCA AGGGTCTTAA CACTAAAGAC CTTGTCGTTC TCTCAGGGGG TCACACCATT GGAATCTCTA GCTGCGGTCT CATCAACAGC
CGTATCTACA ACTTCACCGG CAAGGGAGAT TTTGACCCAG CCATGAACCC TAGCTATGTC AGGTTATTGA AGCAAAGGTG CAAGCCCACT GACTTCAAGA CCTCAGTGGA GATGGACCCA
GGCAGTGTCA AGAAGTTTGA CTCTCACTAC TTCAACATTG TGGCTCAAAA GAAGGGTTTG TTCATCTCTG ACTCAACACT TCTCGATGAC TCTGAGACCA AAAGATACAT CGAGACACAG
GTTGCTACTG CTGGCTCTTC ATTCGCCAAA GATTTCTCTG ACTCGATGCT CAAACTTGGT TTGGTCGAAA TCCTCACCGG GAAAAAGGGT GAGATCAGGA AGAGATGCGC CTTCGTTAAT
AACTAA
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Retrieve as FASTA
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