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Entry information : OsAPx07(LOC_Os04g35520)
Entry ID 1871
Creation 2005-07-12 (Christophe Dunand)
Last sequence changes 2010-08-03 (Marie Brette (Scipio))
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2010-08-03 (Marie Brette (Scipio))
Peroxidase information: OsAPx07(LOC_Os04g35520)
Name OsAPx07(LOC_Os04g35520)
Class Ascorbate peroxidase    [Orthogroup: APx2002]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Oryza sativa ssp japonica cv Nipponbare    [TaxId: 39947 ]
Cellular localisation Stromal
Tissue types Callus
Leaves
Pannicles
Radicles
Roots
Spikes
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OsAPx07
start..stop		 S start..stop
BdiAPx07 558 0 47..358 47..344
TaAPx02-1A 556 0 47..358 47..347
HvAPx06 555 0 47..358 47..347
TaAPx02-1D 554 0 48..358 48..347
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 21635351..21635527 175 N° 2 21635088..21635246 157 N° 3 21633870..21633990 119 N° 4 21633684..21633784 99
N° 5 21633478..21633565 86 N° 6 21633091..21633158 66 N° 7 21632908..21632994 85 N° 8 21632337..21632411 73
N° 9 21632171..21632248 76 N° 10 21631939..21632043 103 N° 11 21631718..21631738 19  
complement(join(21631718..21631738,21631939..21632043,21632171..21632248,2163233 7..21632411,21632908..21632994,21633091..21633158,21633478..21633565,21633684..2 1633784,21633870..21633990,21635088..21635246,21635351..21635527))


exon

Literature and cross-references OsAPx07(LOC_Os04g35520)
Literature Kikuchi,S. et al. (2003) Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 301 (5631), 376-379.
Protein ref. UniProtKB:   Q7XJ02
DNA ref. GenBank:   NC_008397.1 (21635527..21631721)
Protein sequence: OsAPx07(LOC_Os04g35520)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   359
PWM (Da):   %s   38244.53  
PI (pH):   %s   9.2
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAAQRLAALHAAAPSAFSSTSSASHGRPAARSSTTALLPVALPRASATLRAAPSRLLPQEAKAAGSGRSVMCMASASASAASAAVASGAAELKAAREDIRELLKTTHCHPILVRLGWHDS
GTYDKNIKEWPQRGGANGSLRFDVELKHGANAGLVNALKLVQPIKDKYPNISYADLFQLASATAIEAGGPKIPMTYGRIDVTGPEQCPPEGKLPDAGPSAPADHLRKVFYRMGLDDEIVV
LSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTAEWLKFDNSYFKEIKEKRDQDLLVLPTDAALFEDPTFKVYAEKYAEDQEAFFKDYAGAHAKLSNLGAKFNPPEGFTLDG*

Retrieve as FASTA  
Remarks Complete sequence from 7 (TC251329) and 12 ESTs (TC251330).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCCCAGCGACTCGCCGCCCTCCACGCCGCCGCGCCGTCGGCCTTCTCCTCCACCTCCTCCGCCTCGCATGGCCGCCCCGCGGCGCGATCCAGCACCACCGCTCTCCTCCCGGTG
GCCCTCCCGCGCGCCTCCGCCACCCTCCGCGCCGCACCTTCTCGGCTCCTCCCCCAGGTCCGTGTCGGCTCGGTCTTGGGTGGTGGTTGGGTTGGGGTTTGGGACGCCCTGGTTGTTTGT
TGTTGTTGACTCGTGCTCTGGCTGTGTGTGTGTGATCGCAGGAGAGGCGAAGGCGGCGGGGAGCGGCAGGTCGGTGATGTGCATGGCGTCGGCGTCGGCGTCGGCGGCGTCGGCGGCGGT
GGCGTCGGGCGCGGCGGAGCTGAAGGCCGCTCGCGAGGACATCAGGGAGCTCCTCAAGACGACGCACTGCCACCCCATCCTGGTATGATCTCGTCTCGTGTACACGCACCACGCGATGCG
GCTTTGGTTGCTCCGAAACTTCTCCTTCATATCAGCATCACCATGTGGGAGATTTGATTCGGTAGCAGAGGAGCCATCTGGCCGATCGCCTTTGCAACCAAGGATTGCACATGAGAACAA
ACTCAGCTCGGAGACAGCGATGTTATGAGTTTGTGAACACACTGAATTTTCTCTCTGGAGACAGTGATGTCATGAATCTGTGAACACACTGAATATGCTCTCTGGAGCAATGCTGGAATT
TAACATCACGAGGAAGTAATTTCATGACCAGCTTGCCTCTCAAATAGGATTTTGACCTCTAGAAATAGCGTATTGTCGTAAATCACCAATGTGTAACGACAGTTCAATTGTTAAGTCTGA
TCTCATCTGTACTGACGAGTAGGTTGCACATGTCACAAATGGCTTGTGAGAGTTAAGAGTTGTATTGAAAGTTTGAAACTATAAATTCATTCATCACGTATCCTATCATCATTTATTGTT
TGTGGTGATAACTGATACTAACACTTGCAGCAGCTTTTCCCAGTGAGACTATCAAGTATCATGTGAGTTACTCTGTCCGTTCTCAAATATAAGTATTTCTAGCCAGAAATGCTTACATTT
AGGAACGTAGGTCGTGCTTGTGTAAATTGTTAGGCTGTGTTCAATTAGTTATCAGATGGTACAAGTAAATTCTAAGGAATTAGGCAATATGAATGCGGCGTTGAATAATTAATGACAGCA
GAACAACATTATCATAGCACTAGGACATAAGTCCAGTTCATTGGTTATTTCCATGCTATTTTACCTTCATATGGTCATGGCTATGATATGCCAGCTTGCTGAAGTTAAAGGTGTTAATAG
GGCTGCCATTTATCCAAATAATCACCATTGACTGAACTTGTACTGTCGTACATTTTGAATTTGCAAATACTGAATGCAATGCAACGGGGGTAGACCACGGCACCATTTCCTATTGTTTAG
TTCCATTCAAACCCTTGCATGTGCACAATCAATTGGCTTTCTACTCCAGTTTCTCTATATCCACGGTGGTTAAAATGTTATTCCTTTGCCTGCATGAAGGTGTTCGTCTTGGATGGCATG
ATTCCGGTACGTATGACAAGAATATTAAAGAGTGGCCACAACGAGGTGGAGCTAATGGAAGCTTGAGATTTGATGTTGAGTTAAAACATGGAGCCAATGCTGGTAACATTACCTTTTCAC
GATTTCGTTTCCTTGTTGCTTGTAAGTGTACTTTCAGCAACTAAAAATCCTGATTGAATTATTGAAGGGGGCTGGTAAATGCTCTAAAGCTTGTCCAACCTATCAAGGACAAATACCCAA
ATATCTCATATGCGGATTTATTCCAGCTGGCAAGTGCTACAGCAATTGAGGTCTGATCCCCTCACGCCCCCAAAAAATAATGAAAAATGAAGTACCTAACTAGTCTGGTTTTAATGTACG
AACACTATATTCTACCTTAATGATCCATTTTTGTCAAACTTGTACTAGGAGAAGCTGGTGGTCCAAAGATTCCAATGACATATGGACGGATTGATGTCACAGGTCCTGAGCAGTGTCCAC
CTGAGGGGAAGCTTCCCGGTTAGCAACTTATGTTTCACTGGATTTTCCAAAACACTAACATCTGTACTGATATCCTGTCTTGCTTACTTCATAATTGTTCTTTTTAATTTTTAAATGTAA
AGGTTCCTATGTACATTGTCTCTCATCAGCTTAATATATCAACCGACCTTATTTTTTCCCTTGGAAAATTATGGGATAGTTTTTATTGCCACGCTAACAGGCATAAAACTGTTCTTACAT
ATAGGGGTATTTAGGAAATATTGCACCAGCATCATACTCAATCCCTTAAAACTGATGCTTGCTAACTTTCAGTTATCCTTCCCTTTTGGTTGCTCAGATATGCTGGCCCAAGTGCACCTG
CGGATCACTTGAGGAAGGTATTTTACAGGATGGGTCTTGATGACAAGGTGTGCAAATGAGATTCTAGTTAACCAGATGTTTTCCCATTTGCTTTGTTTTATGTGATGTTGAGTTGCATGT
GCCCCGCGATGCTGTGCCTACAGGAGAGATTGTTGTGCTGTCTGGAGCACATACACTTGGAAGGTCCAGACCTGAACGGAGTGGCTGGGGGAAACCAGAAACGAAATATACTGTATGTTC
TTCTTATCTTTATTTTCTTATGTGAGAACCGAGTTTTGAGCATGATCTCAGTTCTATCCACTGTTTCAATGTATTCCCATGTTAAGTCTATCATTGCATATCATGTCATCATTTTTGCAA
CAAGGAGTCAAGGACCACTTAGTACTTCATGATGTTTTATGCTTTCAGTACTTAATGTCTCTGCTTAAATTACCCTTATTCCTCAGGAAAGAAACTACGTGTATTAATTTCAAGATGTGT
ACATAGCTACAGACTAGAGTAAATCAGAACTCCATACGTTTTAGATATTTTTCCTTGGCCTCTGCTCCGATGGTTTTGGCTGAAGGATGTACTTTTTGCTCACATAATCTCTATATATTC
TCTGCAAAATATCGTGCCGCCTCTGCAACTCCATGAAGCAACATCAACTCCAAGTGCATTTGTCTTTATGGTTAGACTGGATTGGACAAATCTTGAGCTTTTTCACCTTTTTTTTCTTAC
TTTTTCAGAAAAGAATGGCCCTGGTGCACCTGGTGGGCAATCGTGGACAGCTGAATGGCTTAAGTTTGATAACAGTTATTTCAAGGTACGTGCCACTTTTCCCTTATTCTTCATGTCGGA
TGATTCATATGATTTTGCATGATGTGAGCTGGTGCCTGGTGGCAATACTGCAGGAGAGATAAAAGAGAAAAGAGATCAGGATCTCCTGGTCTTGCCTACAGATGCTGCATTATTTGAGGA
CCCAACATTCAAGGTGAATAATGCTTAAACTGTACTCTCACTTCCCGAAATAAACCAATCTCGTACTAGGATATGTCAGGATCATTTGAAAATTGAAATAATTATTGAACTAACTGTCTG
AGAATTCACCGCACATTCAGGTGTCTATGCAGAAAAATACGCAGAGGACCAAGAAGCATTCTTTAAAGACTATGCCGGAGCTCATGCTAAACTGAGCAATCTGGGTGCAAAATTCAATCC
TCCTGAGGTGAGTGATAACATCTTGTCCTTAGTTTTCCTTTCCACAACACGCCACTCTTGACCGACTGGGCCACAGTTAGTAGAGATAGTTTATCCGACAAACCACTGCCAAGTTGTTTT
TACCCCCGATGACTAGCGCCCAATCCTAGTCCGTGGTCCTTCTGTTGTGGCAAACTGAGAGTATGTGACTGTTTGGTTGTCCTGCAGGGGGATTCACGTTGGACGGTTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCCCAGCGACTCGCCGCCCTCCACGCCGCCGCGCCGTCGGCCTTCTCCTCCACCTCCTCCGCCTCGCATGGCCGCCCCGCGGCGCGATCCAGCACCACCGCTCTCCTCCCGGTG
GCCCTCCCGCGCGCCTCCGCCACCCTCCGCGCCGCACCTTCTCGGCTCCTCCCCCAGGAGGCGAAGGCGGCGGGGAGCGGCAGGTCGGTGATGTGCATGGCGTCGGCGTCGGCGTCGGCG
GCGTCGGCGGCGGTGGCGTCGGGCGCGGCGGAGCTGAAGGCCGCTCGCGAGGACATCAGGGAGCTCCTCAAGACGACGCACTGCCACCCCATCCTGGTTCGTCTTGGATGGCATGATTCC
GGTACGTATGACAAGAATATTAAAGAGTGGCCACAACGAGGTGGAGCTAATGGAAGCTTGAGATTTGATGTTGAGTTAAAACATGGAGCCAATGCTGGGCTGGTAAATGCTCTAAAGCTT
GTCCAACCTATCAAGGACAAATACCCAAATATCTCATATGCGGATTTATTCCAGCTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGTCCAAAGATTCCAATGACATATGGACGGATT
GATGTCACAGGTCCTGAGCAGTGTCCACCTGAGGGGAAGCTTCCCGATGCTGGCCCAAGTGCACCTGCGGATCACTTGAGGAAGGTATTTTACAGGATGGGTCTTGATGACAAGGAGATT
GTTGTGCTGTCTGGAGCACATACACTTGGAAGGTCCAGACCTGAACGGAGTGGCTGGGGGAAACCAGAAACGAAATATACTAAGAATGGCCCTGGTGCACCTGGTGGGCAATCGTGGACA
GCTGAATGGCTTAAGTTTGATAACAGTTATTTCAAGGAGATAAAAGAGAAAAGAGATCAGGATCTCCTGGTCTTGCCTACAGATGCTGCATTATTTGAGGACCCAACATTCAAGGTCTAT
GCAGAAAAATACGCAGAGGACCAAGAAGCATTCTTTAAAGACTATGCCGGAGCTCATGCTAAACTGAGCAATCTGGGTGCAAAATTCAATCCTCCTGAGGGATTCACGTTGGACGGTTAA

Retrieve as FASTA