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Entry information : OsAPx08(LOC_Os02g34810)
Entry ID 1872
Creation 2005-07-12 (Christophe Dunand)
Last sequence changes 2005-07-12 (Christophe Dunand)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2010-08-03 (Marie Brette (Scipio))
Peroxidase information: OsAPx08(LOC_Os02g34810)
Name OsAPx08(LOC_Os02g34810)
Class Ascorbate peroxidase    [Orthogroup: APx2002]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Oryza sativa ssp japonica cv Nipponbare    [TaxId: 39947 ]
Cellular localisation Thylakoid-bound
Tissue type Leaves
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OsAPx08
start..stop		 S start..stop
ZmAPx08 713 0 1..478 1..451
SbAPx08 708 0 1..478 1..454
BdiAPx04 694 0 1..478 1..440
HvAPx07 693 0 39..478 25..446
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 20891271..20891441 169 N° 2 20891008..20891169 160 N° 3 20890793..20890913 119 N° 4 20890583..20890683 99
N° 5 20890396..20890483 86 N° 6 20890216..20890283 66 N° 7 20890037..20890123 85 N° 8 20889308..20889382 73
N° 9 20889148..20889225 76 N° 10 20888969..20889073 103 N° 11 20888242..20888469 226 N° 12 20888010..20888162 151
complement(join(20888010..20888162,20888242..20888469,20888969..20889073,2088914 8..20889225,20889308..20889382,20890037..20890123,20890216..20890283,20890396..2 0890483,20890583..20890683,20890793..20890913,20891008..20891169,20891271..20891 441))


exon

Literature and cross-references OsAPx08(LOC_Os02g34810)
Literature Morita,S., Kotani,T., Kaminaka,H., Masumura,T. and Tanaka,K. (2003) The expression of rice chloroplastic ascorbate peroxidase genes during greening. NCBI Direct Submission.
Protein ref. UniProtKB:   Q69SV0
DNA ref. GenBank:   NC_008395.1 (20891441..20888013)
Protein sequence: OsAPx08(LOC_Os02g34810)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   478
PWM (Da):   %s   51068.72 Transmb domain:   %s   o458-477i
PI (pH):   %s   5.18
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAERIAASLLPAASPSPAPSPPPPRPRVSAAAAASFPCCSTSAGGLRLRSRPSRFPQKAATTRSGRAGAGARAVVRCMAAAAVAASDAAQLKSAREDIREILKTTYCHPIMVRLGWHDSG
TYDKNIEEWPQRGGADGSLRFDAELSHGANAGLINALKLIQPIKDKYPGITYADLFQLASATAIEAGGPKIPMKYGRVDVTAAEQCPPEGRLPDAGPRVPADHLREVFYRMGLDDEIVAL
SGAHTLGRSRPDRSGWGKPETKYTKDGPGEPGGQSWTVEWLKFDNSYFKDIKEQRDQDLLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSDLGAKFDPPEGFSLDDEPAV
EEKDPEPAPAPAAAPPPPPVEEKKEAEPTPVPVTVGAAVASSPADDNNGAAPQPEPFVAAKYSYGKKELSDSMKQKIRAEYEGFGGSPDKPLQSNYFLNIMLLIGGLAFLTSLLGS*

Retrieve as FASTA  
Remarks Complete sequence from 17 (TC263934) and 3 ESTs (TC263935)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGAGCGCATCGCCGCCTCCCTCCTCCCGGCTGCCTCGCCCTCGCCTGCTCCGTCCCCTCCCCCCCCGCGCCCCCGCGTCTCCGCCGCGGCCGCCGCCTCCTTCCCATGCTGCTCC
ACCAGCGCCGGCGGCCTCCGCCTCCGCTCCCGCCCGTCTCGCTTCCCGCAGGTTCGCAATAGTTTTAGCTCGGCTCGTGTTTTTTTTTTTTTGGGGGTGGGGGGGGGGTTGAATCGAGGT
GTTCTGAGTTGACTGATGCGTGGCACCTGCAGAAAAGGCTGCGACGACGAGGAGCGGGCGCGCCGGCGCGGGGGCGCGGGCGGTGGTCCGGTGCATGGCGGCGGCGGCGGTGGCGGCGTC
CGACGCGGCGCAGCTCAAGAGCGCCCGGGAGGACATCAGGGAGATCCTCAAGACCACCTACTGCCACCCCATCATGGTACGGAACGCCCGCGCCATCTCAGCTCTCGCATCCATATGAAC
AGAGAAGAGTCAGAGATGATGAAATCCTGCGATCCTGCTACCATGTACAGGTGTCCGTCTTGGGTGGCACGATTCTGGCACGTACGACAAGAACATCGAGGAGTGGCCGCAGAGGGGCGG
AGCCGACGGGAGCTTGAGATTTGACGCCGAATTGAGCCACGGAGCCAATGCTGGTACTTAATTTCTCGTGTCTCGGCAGTGCAATTTCGAATTCAGGAAATTCGTGGAGTAATCGTGCTG
ATTTCCTTCATAATCGTATGGTTTTGGTTGGAATTTTGATAGGTGTCTGATTAATGCTTTGAAGCTTATCCAACCAATCAAGGACAAATACCCGGGTATAACTTATGCTGATTTGTTCCA
GTTGGCAAGTGCTACAGCAATTGAGGTCTCAGACTTCTTCTCTCTGCTCTAGTGACTTTGCTAGATATTTTTTGGATGATCGGTAGTCTATGTGCTTGAATCTTTTGAGAAAAATTTCTT
GCAGGAGAAGCTGGTGGGCCGAAAATTCCAATGAAATATGGACGAGTTGATGTCACAGCAGCTGAGCAGTGCCCACCAGAGGGGAGGCTTCCTGGTCAGTGTTTCCATTAAGTTCTTCAT
TCTGTTTCTGATCAACGTTTGCATTTATGAATTGTGAGAGGAACTTATCAAAGAGTGACCTTCTGGTGTTGATAAATGCCCCCCAGATATGCCGGTCCACGTGTGCCCGCTGATCATCTT
AGGGAGGTATTCTACAGGATGGGCCTTGATGACAAGGTGTGGATGATGCAAAAAAGAAATTAGTTGCCTATCTGCTATTTGTTCTTCATGTATGTTGTATAACCATTTCTTTTGGACTAT
TTATGCAGGAGAAATTGTTGCATTATCTGGAGCACACACACTTGGAAGATCAAGACCTGACAGGAGTGGCTGGGGAAAGCCAGAAACAAAATATACTGTATGTTTTCTTGTCCACTTTGG
AAACTCAACAGGAAAAATAAGTTATTTTCAGCAGTAGGAAGTTCTAGGCATGGCCAGACCTTCAATGTTCTACACTCTGGGTATAGAATATTACATTTTTGGGGCATTTGCAAATTTGCC
ACCGGTTTTTTCAATATTGCAAGGATGCTACTCGAATGACAGTTCTAGTGATATTTTTGCAATTTTCTAGTGGCAGTTTTGCAATAACGATTCAAAGTAGTGGTAAATTTGCAATTGCCC
CTACATTTTTTGAGACATTCAGGCAGAGGTGAAAACAATGCATGTACTTTTTTGTGTTATCTTGTAAGTAAGCACCATATTATGCTTTTAAAATCCGTGAATACTTTGTCCTTATGCTGT
AAATAAATAATGTTTTAATTCAGGATTTTACAAAATGGGTTATCCTTACGTTTCTTTTGTATGCATATAATGGTAAAATAGAATTAGGATGCTAAGAACTTCATAGCTAACAACTTTGTC
ATTCTCTAAGCCCTGATACTTCTCTGTGGGGAAATGAAGATTAACTTTTCGATGCAATCTTACCTTAATCACACCAGCACAATAGCAAATCAGATTAGTTTCAGTTTTCAGACTGACATT
TAAAGGTGGCTTCTATTATTGTGGTCTACAGAAAAGGATGGGCCTGGTGAACCTGGAGGGCAATCATGGACAGTTGAATGGTTGAAGTTTGATAACAGTTACTTCAAGGTGTGTTAGCAT
TTTGTCATGGTTTACAAAATTATTTTTTTCATTTGAATATGTGATGATTCAGCTGATGATAATGTTTCAGGAGACATAAAAGAGCAAAGGGACCAGGATCTTCTAGTGCTACCCACAGAT
GCTGCATTATTTGAGGATCCGTCCTTCAAGGTTATTTGGTTGTGCTCAATTTGTGGCTTGAATAGCTCATAGGTCACTGTCTGAAATATCTGCAACATATGCAGGTGTATATGCCGAAAA
ATATGCAGAGGATCAGGAGGCATTCTTTAAAGACTACGCTGAAGCTCATGCTAAACTGAGCGACCTTGGTGCAAAGTTCGATCCACCTGAGGTGAGGACTACCATCTTTTTTTTTCATTT
TGATCTCCTGGCAACCAATTGTGCCTAAACAATCATAAACAATACGAAAGACACTTAAGCTCTTAAGTTCTTTTATTAGAACATGCCAGATTTTCTTCCTCTTGTTTGCAAGTTCAAAAC
ATGACTCCCTGATTCCTCGTCCACATCGAGTAGATATCTTTTGTAATGTATTTTTTTTCTAGAGAATTCAGTAATGTACTTATGTGACAGTAAGATGGAGTACTGGACCTTCAGGACAGA
AATATAGTTCAGATAGTTTTTCTTTTTACCGAATGTAATCCAAACACTGGGAGTTTGAGGTAGTCCATCATATCAATCTTTCTTCTGCAATGCAACGAAATGGGGTTTACTATGGCAGCT
TTTCTTAGCTGTTCTTCATGTAAAAACCAGTGCAATTGTAGGTTGGATATTTACAGAGTCCAACTTTACCAGCCTTCGATCAGGAAGTGATGGATGTGATTTTCCTGCAGGGGGATTTTC
ACTGGACGATGAACCAGCCGTCGAAGAGAAGGATCCTGAACCAGCACCAGCGCCAGCAGCAGCACCACCACCTCCACCAGTCGAGGAGAAGAAGGAAGCTGAACCAACTCCAGTACCAGT
AACGGTAGGAGCAGCAGTGGCATCATCGCCAGCGGATGACAACAACGGTGCAGCACCGCAACCAGAGCCCTTCGTCGCTGCGAAATACTCCTACGGAAAGGTATGCACTCTCCACGAAGC
CTAGCTTCTAGCCCTAGATTTGATGGACAATGCATGGTATCTTGCAATGGCTTTTGCAGAAAAGGAGCTGTCGGACTCGATGAAGCAGAAGATCAGGGCGGAGTACGAGGGATTCGGAGG
CAGCCCGGACAAGCCTCTGCAGTCCAACTACTTCCTCAACATCATGCTCTTGATCGGAGGGCTGGCCTTCTTGACGTCTCTGCTCGGGAGCTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGAGCGCATCGCCGCCTCCCTCCTCCCGGCTGCCTCGCCCTCGCCTGCTCCGTCCCCTCCCCCCCCGCGCCCCCGCGTCTCCGCCGCGGCCGCCGCCTCCTTCCCATGCTGCTCC
ACCAGCGCCGGCGGCCTCCGCCTCCGCTCCCGCCCGTCTCGCTTCCCGCAGAAGGCTGCGACGACGAGGAGCGGGCGCGCCGGCGCGGGGGCGCGGGCGGTGGTCCGGTGCATGGCGGCG
GCGGCGGTGGCGGCGTCCGACGCGGCGCAGCTCAAGAGCGCCCGGGAGGACATCAGGGAGATCCTCAAGACCACCTACTGCCACCCCATCATGGTCCGTCTTGGGTGGCACGATTCTGGC
ACGTACGACAAGAACATCGAGGAGTGGCCGCAGAGGGGCGGAGCCGACGGGAGCTTGAGATTTGACGCCGAATTGAGCCACGGAGCCAATGCTGGTCTGATTAATGCTTTGAAGCTTATC
CAACCAATCAAGGACAAATACCCGGGTATAACTTATGCTGATTTGTTCCAGTTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGGCCGAAAATTCCAATGAAATATGGACGAGTTGAT
GTCACAGCAGCTGAGCAGTGCCCACCAGAGGGGAGGCTTCCTGATGCCGGTCCACGTGTGCCCGCTGATCATCTTAGGGAGGTATTCTACAGGATGGGCCTTGATGACAAGGAAATTGTT
GCATTATCTGGAGCACACACACTTGGAAGATCAAGACCTGACAGGAGTGGCTGGGGAAAGCCAGAAACAAAATATACTAAGGATGGGCCTGGTGAACCTGGAGGGCAATCATGGACAGTT
GAATGGTTGAAGTTTGATAACAGTTACTTCAAGGACATAAAAGAGCAAAGGGACCAGGATCTTCTAGTGCTACCCACAGATGCTGCATTATTTGAGGATCCGTCCTTCAAGGTATATGCC
GAAAAATATGCAGAGGATCAGGAGGCATTCTTTAAAGACTACGCTGAAGCTCATGCTAAACTGAGCGACCTTGGTGCAAAGTTCGATCCACCTGAGGGATTTTCACTGGACGATGAACCA
GCCGTCGAAGAGAAGGATCCTGAACCAGCACCAGCGCCAGCAGCAGCACCACCACCTCCACCAGTCGAGGAGAAGAAGGAAGCTGAACCAACTCCAGTACCAGTAACGGTAGGAGCAGCA
GTGGCATCATCGCCAGCGGATGACAACAACGGTGCAGCACCGCAACCAGAGCCCTTCGTCGCTGCGAAATACTCCTACGGAAAGAAGGAGCTGTCGGACTCGATGAAGCAGAAGATCAGG
GCGGAGTACGAGGGATTCGGAGGCAGCCCGGACAAGCCTCTGCAGTCCAACTACTTCCTCAACATCATGCTCTTGATCGGAGGGCTGGCCTTCTTGACGTCTCTGCTCGGGAGCTGA

Retrieve as FASTA