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Entry information : AtAPx04 (At4g35970 / APX5)
Entry ID 1887
Creation 2006-09-04 (Christophe Dunand)
Last sequence changes 2015-06-03 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-11-10 (Achraf Jemmat)
Peroxidase information: AtAPx04 (At4g35970 / APX5)
Name (synonym) AtAPx04 (At4g35970 / APX5)
Class Ascorbate peroxidase    [Orthogroup: APx2006]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis thaliana    [TaxId: 3702 ]
Cellular localisation Peroxisomal
Tissue type N/D
Inducers Hormon treatment
Stress treatment
Repressor N/D
Best BLASTp hits
Perox score E-value AtAPx04
start..stop		 S start..stop
AhalAPx03 568 0 1..279 1..279
AlyAPx04 559 0 1..279 1..279
CagraAPx04 550 0 1..279 44..322
CrubAPx04 549 0 1..279 1..279
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 17028651..17028760 108 N° 2 17028844..17028968 123 N° 3 17029072..17029121 48 N° 4 17029223..17029288 64
N° 5 17029371..17029416 44 N° 6 17029496..17029578 81 N° 7 17029665..17029744 78 N° 8 17029832..17029934 101
N° 9 17030029..17030205 175  
join(17028651..17028760,17028844..17028968,17029072..17029121,17029223..17029288 ,17029371..17029416,17029496..17029578,17029665..17029744,17029832..17029934,170 30029..17030205)


exon

Literature and cross-references AtAPx04 (At4g35970 / APX5)
Protein ref. UniProtKB:   O65634
DNA ref. Phytozome 12:   Chr4 (17028651..17030205)
mRNA ref. GenBank:   NM_119763.2
Cluster/Prediction ref. Phytozome Gene 12:   19648112 UniGene:   At.31367
Omic ref. AtProteome:   At4g35970 ATTED-II:   At4g35970 e-FP Browser:   At4g35970 ePlant:   At4g35970 TAIR:   At4g35970
Protein sequence: AtAPx04 (At4g35970 / APX5)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   279
PWM (Da):   %s   30747.95 Transmb domain:   %s   o250-272i
PI (pH):   %s   8.75
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAVNVDAEYLKEIEKTRRDLRALISSRNCAPIMLRLAWHDAGTYDAKKKTGGANGSIRFKEELNRPHNKGLEKAVAFEEVKAKHPRVSYADLYLAGVVAVEVTGGPAIPFTPGRKDADSA
DDGELPNPNEGASHLRTLFSRMGLLDRDIVALSGGHTGRAHKERSDFEGPWTQDPLKFDNSYFVELLKGETPGLLQLKTDKALLDDPKFHPFVKLYADEDMFFKAYAISHKKLSELGFNP
PRRIPSAVTQQTLGIAVAAAVVIFTICYEASRRGK*

Retrieve as FASTA  
Remarks Complete sequence from genomic (8 introns), 4 cDNAs and 3 ESTs.
Promoter►
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Send to cis Analysis
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GTAATTAATT TGTCGGAAAA AGTTAGCATT TGAAAATGTT CAAAGTAAAA GTTTTTATTT GATGTGTGTA CGATGATACA ATCACAGTTT TGATAAACCA GGATTCGTGG AGTTGGAATC  AGTTTTATCA AATCAACATT CCAAAATTAC TAACAAGTTT GAAAATATGC AATGACAAAA AATCATAAAA ATCATAAATA CACGAGCTAC ATATGGATGA ATGAGAGAGT TAATCTATAA  AATCCGACCA AATAACTCAC CAAGTCTACG ATTTATTATA TGGCTTTTAA CAGAGTAACG ACTGAGAGAG ACATATAAGA AGAGCATTGA TGAAACTAAC CCTGAACATC ACGGCGAGTA  GTCAACTGGA AGTCCAAGAT GATACCCCGG CGCAACAAGC CCGCTATCAC CGCCAAAGGT TGCCGTGGAT CGTTTGTCGT GACTGTGACG GATCATTTAT CTCTTCTCTC TCTCACCTGT  AATTGTCAGA AACAGTTTAG ATGGCAGAAA TTTCTCAAAG ATAAATTACA CTATAATAAC TCTCTTTAAC ATTATGACTA CAATTCCCAA AATCAAGATG TTTCAGAAAA TACACGGCTC  AATTCGTCAA ACAAAAAGGA GAAACATCAG ATTCTTACCA AACCCTAAAG CAGAGTCTCA AAGCAGAGTT CTTGATTACG ATGATAGTAT ATAATGAAAT CACGGGGAAA TTGGGTGAAC  GCTCTCTGTT TTTCTTTCTT TGCGTTGGTT GTAGTGAAGC TTGATGAGCC TTCCATTTCT AGCTATTTGC TTGGAGAGAA ACCTGCAAGA ACACTCGAAA AAGAAAACAG AGGAAGATGT  GAGTTTAGAC AAAGTGAAAA TAGTATGATG CGTAAAACTG AAACTGACGA AACTTTAGTG AGAAGAATAG ACCATGAAAG TGTTTCGATC AACAACATAA GTCGTAGAAA AGTAAGGAAA  CATCTAAGAA TTCTTACCAA TCTTAAAAGC AGAGTTCGGC TAGTGACTAC GAGAAACCTT GGACGAACTT TGTTGAGAGG AATGAAACTT GCTCTCGATT AACTTTGGAT GAACTTTGAG  CTCTCTGACT CTCTCTCTCT TTGGTTTTTC AACTAGAAAA AAGACTTTTG CTTTCTGAAA CTACGAGAAT AGTAAGCGAT TATACAGAAG AAGAAATGAT TGTGGGAAGT AAGTGAGTGA  GCACGAGCCA CTTATATAGG CAGCTTCGGA TTTCTTCTTT CAACGGCTAC TTTTCTAACG TCTATATTTT CTTACCGTTG TAAATTTTGC GTCTCAAATA AGTTACCGTT TGTGCATGAG  GTGACAATTG ACTTGACAGG TTGACACCGA GATGAAAATT ACACAACAAC AAAAACTAGA AGCATTCATA ATAAGCCCAA TGGGCCAATA GAGACCCAAC CAAAACCCCA AACCAACAAA  AAATTAAGGA CACTGTTCGT CATTAGTGGA TAATTAATAT TTTAGTGTAA CACCTTCACA ACGATCGTCT CTCAAGGTCA AATAGTAACT TAGTAAGTAG CCCTCTTGAT ACGAAGTAGG  AACCAAAACG CTTGTCTTTA TGGATTAGAA TGTTTGTCAT ATCTTGTTCA AAACTAAAAA TGTCTAAAAG TTATCTTGTT TTTATTTGTT ATTACAATAA CGAAATCATT TCAATCAAAT  TGATCTCAAA CAACCAATGT AGTTTAGTGT TAGGTAGAAT CTTCTTCCGA GATAGTTATG CCCCAGCTCT GCTTGCGACG GGATGGTAAC TAAAACTTTT GAATAAACTA TAGTTGCATA  GATGAAAAAT TGAATATATG CGAAGATTAG CAAAAGGGTT CTCCCATAAC TATATTTAAT ACTTTGCTTT CTCCATATGA CAAAACATTC TTCTCCCCTA AACTCTTCTT CAATCCTATT 
TATATATTCA TCCTTCTGAG TCATTCTTCA ATCTTATTCA TCGGTCTGAG TTATTTTGCT TGCTCTTTGA AATTCTGACA 

Retrieve as FASTA  
Terminator +►
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Send to cis Analysis
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGAAGTTTCG CAGATGCAAT AAGGGACGAG AGAAAAATGT TAATTGAATG TATGCAATAA ATACAAAGAT TCATGCAATG TTACCTCCAT GCTCCTTTTC AAGCTTCAGT GCTTTGGACA  AAATTATGGA TGTTACATCG CAGTATGTGA ACTCTCCTCA AAAACAATTA CTACTGTTAC CAAATTAAAG ATACAGAGTC TAACTGAGAA ACGAACTGTG GATGAGAAGA CTAAATTTCT  TTTGGAACAA CCAGGAATAT CAATAGCTGA TTAGGTTGCT ATAACCTTCC AACTTTTGAT GACTCATGGT TTCCATAACG AACAATCTGA CTCAAGAAAC CATGTTCTGT GCTCGGGAAT  AACATAGAAA TACACGATAA GTAAATACTC TATTCAAGAA ATGGGAGATA TATTTATCTC GAAGTAGCAG CATAGCATTT ATTTTTTCAG AAACACACAT CTGAGAATAC AGCATTAATA  ACATTTGACA CTATCATGGG CGAAATCAAA AGTTAAAACT TGATAAGTAG GTTCCTCGGC CACAGATACT TATCCTGTAA TCCACTAGCA TATATCTTAT GAGACCCTGA CAAGTGGAGA  AAAACTAAAA TCAAAGTGCC CTGAAACTAT CCGTTTTATC TAGCCTGGCA GTACCGGAGC TTGATGATTC GCCAAGTGGA TCAGGAGAAG CTGCTCTAGA AGAGTCTCTT CCTTTCAGAG  AAGTTGGCAT TCCAGAGATC TCCTATAAAA AAAGTAGCTA GAGTCATCAT CCTAAAAGTG GTCATACTCA AATCACACTA GATGGCTGAA ACAATTCAAT AACTTACCTT CATCAAATGC  AACCTCATGT CAGTAGGACG AGTATGGTTA CCAATGCAGG CCATTGCAAA CTTGGAATAA CTAAACAACA CATCAGCAGC AGCTTGCTTC TGCTCATCAA CCTATAAGAT ATCATCAGCT 
CAACTCTTCA ATAACAATTA CACAACAAAC TCCAAAAGTC 

Retrieve as FASTA  
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGTGAACGTTGATGCAGAGTACCTCAAAGAGATAGAGAAAACTCGTAGAGACCTTCGAGCTCTCATCTCTTCCAGAAACTGTGCTCCCATTATGCTCCGTCTTGCGCGTAAGATC
TTTGCTCTCAGAATCATTCTCCGTTTTTCTTTCTTGTCTTGATGTTTCCAAATGCCAACTCTTCTGTGCATATAGATGGCATGATGCAGGAACCTATGATGCCAAGAAGAAAACCGGAGG
TGCCAATGGATCTATCAGATTCAAGGAAGAGCTAAACCGTCCACACAACAAAGGTTTGGAGAAGGCAGTCGCCTTCTGCGCGGTGAGTTTTATGATTAAACCTTCTAATCCGTTACTACT
ACTCTTCAGGACCTGCAAGCGGTTGCTGTCTCCTTTGATGTCTAAATTTTGGTTTCTAATTTCAGAGGAAGTAAAGGCTAAGCATCCCAGAGTCTCTTACGCAGACCTTTATCAGAGGTA
AATCAACATTGGTATACAGCATCTCGAAGCCATTAAACTCATAAATACTCTCTTCCCCCTTGATGGTTAGCGTGACAGATTCTTTCATTTCATTTCAGCTCGCTGGAGTTGTTGCAGTGG
AGGTTACTGGCGGCCCTGCAATCCCATTTACACCAGGCCGTAAGAGGTAGTTACACTTACCGCTAAAGCGTATGCGTTAAATCATCGTTGCTAAGTGAGTTTACTAATGTTGAGAAATAT
GATACCAGGATGCTGATTCCGCGGACGATGGAGAACTTCCAAATCCAAATGAAGAGGTTACTCCTGCAGCTTGTAGCTCCTGCAACGGAATTCTATTTCACAAACTGACTAAGCCCTCCT
TTTGGATTATTGCAGGTGCCTCACATTTAAGAACTCTCTTCTCTCGTATGGGTCTATTGGATAGAGACATTGTAGCTCTCTCTGGAGGTCACACTTTGTGGTACTTATTACTAACTATCC
TTCAAAATATCCGCCAGTCACTAAACATGCTCCAATGAACCAACTTGGTTGCTACTTTGTATATAGGGACGTGCACATAAGGAGAGATCAGATTTTGAAGGTCCTTGGACACAGGACCCT
CTCAAGTTTGATAACTCGTATTTCGTGTGTAAGCCAACGATAAAGTCACACAAGAGTTAAAGCGAGAGAGAGTGAGAGTTCTGAAACTTACATTTTTTGCTGATTGGTTTTTCAGAGAGC
TTCTAAAAGGGGAGACTCCGGGATTGCTACAACTTAAAACCGACAAGGCTCTACTTGATGATCCCAAGTTCCACCCTTTTGTTAAGCTGTATGCAAAGAGGTAGATTAGATTTCACTACG
ATTATAAGAAACTTTTACTTTGGATGATTCTCTGGTTTCATCAACAACAAAAATGATTTTGATGTGTATGTCAGGACGAGGATATGTTCTTCAAAGCCTATGCAATTTCACACAAGAAAC
TCTCAGAACTAGGATTTAATCCGCCAAGAAGAATTCCTTCAGCAGTGACGCAGCAGACGCTTGGAATCGCTGTTGCTGCAGCTGTGGTGATCTTTACAATATGCTATGAAGCAAGCAGAA
GAGGCAAGTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGTGAACGTTGATGCAGAGTACCTCAAAGAGATAGAGAAAACTCGTAGAGACCTTCGAGCTCTCATCTCTTCCAGAAACTGTGCTCCCATTATGCTCCGTCTTGCATGGCATGAT
GCAGGAACCTATGATGCCAAGAAGAAAACCGGAGGTGCCAATGGATCTATCAGATTCAAGGAAGAGCTAAACCGTCCACACAACAAAGGTTTGGAGAAGGCAGTCGCCTTCTGCGAGGAA
GTAAAGGCTAAGCATCCCAGAGTCTCTTACGCAGACCTTTATCAGCTCGCTGGAGTTGTTGCAGTGGAGGTTACTGGCGGCCCTGCAATCCCATTTACACCAGGCCGTAAGGATGCTGAT
TCCGCGGACGATGGAGAACTTCCAAATCCAAATGAAGGTGCCTCACATTTAAGAACTCTCTTCTCTCGTATGGGTCTATTGGATAGAGACATTGTAGCTCTCTCTGGAGGTCACACTTTG
GGACGTGCACATAAGGAGAGATCAGATTTTGAAGGTCCTTGGACACAGGACCCTCTCAAGTTTGATAACTCGTATTTCGTAGAGCTTCTAAAAGGGGAGACTCCGGGATTGCTACAACTT
AAAACCGACAAGGCTCTACTTGATGATCCCAAGTTCCACCCTTTTGTTAAGCTGTATGCAAAGGACGAGGATATGTTCTTCAAAGCCTATGCAATTTCACACAAGAAACTCTCAGAACTA
GGATTTAATCCGCCAAGAAGAATTCCTTCAGCAGTGACGCAGCAGACGCTTGGAATCGCTGTTGCTGCAGCTGTGGTGATCTTTACAATATGCTATGAAGCAAGCAGAAGAGGCAAGTGA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATTCATCGGT CTGAGTTATT TTGCTTGCTC TTTGAAATTC TGACAATGGC AGTGAACGTT GATGCAGAGT ACCTCAAAGA GATAGAGAAA ACTCGTAGAG ACCTTCGAGC TCTCATCTCT  TCCAGAAACT GTGCTCCCAT TATGCTCCGT CTTGCATGGC ATGATGCAGG AACCTATGAT GCCAAGAAGA AAACCGGAGG TGCCAATGGA TCTATCAGAT TCAAGGAAGA GCTAAACCGT  CCACACAACA AAGGTTTGGA GAAGGCAGTC GCCTTCTGCG AGGAAGTAAA GGCTAAGCAT CCCAGAGTCT CTTACGCAGA CCTTTATCAG CTCGCTGGAG TTGTTGCAGT GGAGGTTACT  GGCGGCCCTG CAATCCCATT TACACCAGGC CGTAAGGATG CTGATTCCGC GGACGATGGA GAACTTCCAA ATCCAAATGA AGGTGCCTCA CATTTAAGAA CTCTCTTCTC TCGTATGGGT  CTATTGGATA GAGACATTGT AGCTCTCTCT GGAGGTCACA CTTTGGGACG TGCACATAAG GAGAGATCAG ATTTTGAAGG TCCTTGGACA CAGGACCCTC TCAAGTTTGA TAACTCGTAT  TTCGTAGAGC TTCTAAAAGG GGAGACTCCG GGATTGCTAC AACTTAAAAC CGACAAGGCT CTACTTGATG ATCCCAAGTT CCACCCTTTT GTTAAGCTGT ATGCAAAGGA CGAGGATATG  TTCTTCAAAG CCTATGCAAT TTCACACAAG AAACTCTCAG AACTAGGATT TAATCCGCCA AGAAGAATTC CTTCAGCAGT GACGCAGCAG ACGCTTGGAA TCGCTGTTGC TGCAGCTGTG  GTGATCTTTA CAATATGCTA TGAAGCAAGC AGAAGAGGCA AGTGAGGAAG TTTCGCAGAT GCAATAAGGG ACGAGAGAAA AATGTTAATT GAATGTATGC AATAAATACA AAGATTCATG 
CAATGTTACC TCC 

Retrieve as FASTA