Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
327 (304) |
| PWM (Da): |
35230.36 (32712.0) |
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| PI (pH): |
4.97 (4.96) |
Peptide Signal: |
cut: 24 range:24-327 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
METNRFPYAI VLLLPLLAFS ASADSLQFGF YKQTCPEAED IIENLVSRAV ENNPGIAAGL IRLHFHDCFV RGCDASVLLD SIPGSPAEKQ HPANNPSLRG FELIDEAKAA LESCCPNTVS
CADVLAFAAR DAARFTGGFY YGLPGGRRDG TVSRESEVGE NLPGFNSNAE ELRDEFAKKG LSLEDMVALS GAHSIGVSHC SSFSSRLYDF NSTHSQDPSL DADLADYLKK RCPPPGTEGD
TVDLDVATPK ILDVHYYRNL KKGKGLLSSD QTLWASSLTA DMVASFSKNP EVWFHKYAGA MERMGAIDVL TGNEGKIRVK CSVVNGH
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Retrieve as FASTA
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| Remarks |
Incorrect prediction from Lemna.org. Two extra short exons in 5'. |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AGCTTTGTCT AGCCCTCTGC CGTGCCATTT ATTCCCCCCT ATTCTTTTAT TCTTCTCCTA TTTTGCACCA AATAAACGCC TCTCAGTGCT TAGCAAGAGG AGTGCCTTGG GTGTCATCTT
CCTCTCTATT TCTCTCTCCC ATCTCTTCAA TTCTTTCAGT GTGTGAGTGG GTGGTTTGTA AGCACCCTCT TCGTGTTTTG TGAGATCCTC TTCTCCTTCA TTCTATCAAA AGTGATACAG
AGCTTGGTTC GAGAAGATTA TTTTTGGGAG TTTTGGTGTG GGGGGTTTTT CTTCTGAAGT CGGATTTGTT TTTGGGAGAA CTTGGTAGGT TTTTAAAGTT TAGTTTTGAA TGGCAACTAA
AGTTAGTTAA TAATTTTCTC AACTAGCTAT AACTCCGTTT AATGGAGAGA AGGTTGAGAT TTGGAGTAAG AGAATGGAGG AGTTTTTAGT TGCACTGGAG GTCTGGGATG TTGTTAATAA
TGGTTATGTT GAAGATGAGA CCAGAAGAAA TGAGTTAGGA GAACTTAAGA AGAAGGATGC AAAGGCTATC TTTGTTTTGA GTCAATCATT ACTGATTGAG TCAATCGGGT AGTGGAATAT
TTCGAAAAAG AAATTTTATG GAGAAGAGAA GATTACGATG GTGAAACTAC AAATGTTCAG AAGAGAATTT TAAATTTTGA ATATGAAAGG TGAAGAAAGT ATTCGAGATT ATTTTTGTAG
AATTTATACT CTTGTTAAAG AGATGAGAAG CTATGGGGAA GATATATCTG AACGGAAGGT TGTTGACAAG ATATTAAGGA GTCTTCCACC AAAATTGAAT TATATCGTTG TTGCCATTGA
GGAGTCGAAA GATCTATAAA CAAAACGAGT AGATGGGATC ATTAGTGGCT CATGAAGAAA AGATGAAGAG AGTTCTTGAA AAATCATTAG AGGAAGCATT TCAGTCTAAA GCTCAAGTTT
CAAAAGTTCA ATTGGAATAA GAAGGTACAA GTCATTTCAC TCAACCTGGT AGAAGACATG GACGTAGTAT TTTTTGTGGA CATGGTTGAG GGAGATCTGA TTACAGAAGT TAAGGAAGAC
ATGGAATTTA TGCAATAGAT GGAGGTCAAT TTGGTCAAGG AGGTCAACAA GGAGGTGGAG GACAACGTGG ACGTGGAAGA AGGTTTCAAA GACAAAACTT TGGACAAAAC TGGCAAGCTA
AAGGTGAAGG TAGTAGTCAA AGAAGAAATT ATCGAGAGTG AAGCAATCTC ATTATTGCAA GAGACTTGGA AATATTGAAT CTTATTATTG GAAAAAGGTG AATCAACAAG CAAATACATC
TGAAGTTGAG CGAACCAATT TGTTCCTTTT AAGCACAAAT TTGGTTGATG GTAATAATAT TTAGTTCTTA GATTGTGCAT GTAGCAATCA CATGGGACAT GATAAGAAAT TGTCTAGAAC
TATGGACATG TTGAATACAA GTCATGTAAG AATGGGTGAT GGCAAGACTG CGAAAATTGA AGCCATTGGG AGTATTGAGA TTCATACAAA ATCTAGTGAT AGTAAGGTAC TTAATGATGC
TTATTATGTC CTAAACTTTA CTCATAACCT CTTGAATTTA GGAGAGCTCA TGGACTAGAG ACATACATTT AATTTTGATG ATGATAAATA TATTATTGGA CATAAAAAGA AGAATATGCA
TCCAAAAACT CTTTTGATGG TTGGACATGG GATGTTCCGT GTTAATTTAC TAGATTTGGT TGAATTTGCA ATAATTTCTG ATAAGATTGA TGAGTCTACA ATTTGGCATA AGAGGTATGG
ACATCTATAT TTTAATGCTA CGAAGTTATC ATGTATGAAG AACATGATCA AAGGATTACC ATCTATATCA CGTGAAGATT ACATGTGTGG AGGATGTATT TTTCGAAAGC AACATCGATG
TCATTTCCTG TTGGTCAAGC CTCGAGAGCA CAAACACCAC TTGAATTGAT CCATGCAGAT TTATGTGGCC CTATGAAGAC
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Retrieve as FASTA
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DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCTGCTCG CCCAGAACCA CCTTCCCCAT GAATTAGAGC CAGATCCTGC GATCAATTCC CAACATTTGG AGGAAAGACT CCGCGTAGAT CTTATTTCTG TAAACGAGCT CATCTCTATC
TCTCTCTCTC TACCCTATCC TGCTGGCTTC CTTAATGTGT TTTCTAATAA GAAAGTTGAC GAGCGAAAGT TTCAAGGACA TAGTCAAGAT GGATGACGGT TTCTCCTGGA TTATCAGAAT
ACGTCAATAC GCACCCACTC TTATTCTAAC GTGCTACACG GAAGGACGAA GAACATCCAC CCACCGAAAG GAGGAACCGC ATGTATAAAT AAACGTGGAA GCTGCATTAT CGCCTCCAGA
AACCTCATCT TCTCTCTCCT ACTTCCATCT CGGCAGCCAC CTTATCTTTC CAGACCCTGA AACGAATAGG AACACCGCGC CTAATGGAGA CTAATCGATT TCCCTATGCA ATCGTGCTCC
TCCTTCCTCT GTTGGCTTTC AGCGCATCTG CAGATTCTCT TCAATTCGGG TTCTACAAGC AGACCTGCCC CGAGGCGGAG GATATCATCG AGAACTTGGT TTCTCGAGCG GTGGAAAATA
ACCCCGGAAT CGCCGCAGGT CTCATTCGAT TGCACTTCCA CGACTGCTTC GTCAGGGTAA GCTGCGTTTC TTGAGAGGAG CGGGGGACTG TACGATTGTC GCGTACTGAT GATCTTTCGC
TTGTTTTACA GGGATGCGAT GCTTCCGTGT TGTTGGATTC TATCCCCGGA TCCCCTGCAG AGAAGCAGCA TCCCGCGAAC AACCCCAGTC TGCGAGGTTT TGAGCTGATA GACGAAGCCA
AGGCTGCCCT CGAGTCCTGC TGCCCCAACA CTGTGTCCTG CGCCGACGTC CTGGCCTTCG CAGCTCGCGA CGCCGCGCGC TTCACCGGAG GCTTCTACTA CGGGCTTCCG GGAGGAAGGA
GAGACGGGAC GGTCTCTAGA GAGTCGGAGG TCGGAGAAAA CCTACCGGGT TTTAATAGCA ATGCCGAGGA ACTAAGAGAC GAGTTTGCAA AGAAGGGCTT GTCCCTGGAG GATATGGTGG
CGCTCTCGGG CGCGCACTCC ATCGGCGTCT CCCATTGCTC GTCCTTCTCT TCCAGGCTTT ACGACTTCAA TTCCACGCAT TCCCAGGATC CTTCCTTGGA CGCCGATCTC GCCGACTACC
TCAAGAAGCG CTGCCCGCCT CCGGGGACGG AGGGCGACAC CGTGGATTTG GACGTGGCCA CGCCCAAAAT CTTGGACGTG CACTACTACA GAAATCTCAA GAAAGGGAAG GGCCTACTCA
GCTCCGATCA GACGCTCTGG GCCAGCTCCC TCACGGCCGA CATGGTGGCC TCCTTTTCGA AGAATCCCGA AGTCTGGTTT CACAAGTACG CCGGAGCGAT GGAGCGAATG GGTGCCATCG
ATGTCCTCAC CGGGAACGAG GGGAAGATCA GGGTCAAATG CTCTGTCGTC AACGGCCACT GA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGAGACTA ATCGATTTCC CTATGCAATC GTGCTCCTCC TTCCTCTGTT GGCTTTCAGC GCATCTGCAG ATTCTCTTCA ATTCGGGTTC TACAAGCAGA CCTGCCCCGA GGCGGAGGAT
ATCATCGAGA ACTTGGTTTC TCGAGCGGTG GAAAATAACC CCGGAATCGC CGCAGGTCTC ATTCGATTGC ACTTCCACGA CTGCTTCGTC AGGGGATGCG ATGCTTCCGT GTTGTTGGAT
TCTATCCCCG GATCCCCTGC AGAGAAGCAG CATCCCGCGA ACAACCCCAG TCTGCGAGGT TTTGAGCTGA TAGACGAAGC CAAGGCTGCC CTCGAGTCCT GCTGCCCCAA CACTGTGTCC
TGCGCCGACG TCCTGGCCTT CGCAGCTCGC GACGCCGCGC GCTTCACCGG AGGCTTCTAC TACGGGCTTC CGGGAGGAAG GAGAGACGGG ACGGTCTCTA GAGAGTCGGA GGTCGGAGAA
AACCTACCGG GTTTTAATAG CAATGCCGAG GAACTAAGAG ACGAGTTTGC AAAGAAGGGC TTGTCCCTGG AGGATATGGT GGCGCTCTCG GGCGCGCACT CCATCGGCGT CTCCCATTGC
TCGTCCTTCT CTTCCAGGCT TTACGACTTC AATTCCACGC ATTCCCAGGA TCCTTCCTTG GACGCCGATC TCGCCGACTA CCTCAAGAAG CGCTGCCCGC CTCCGGGGAC GGAGGGCGAC
ACCGTGGATT TGGACGTGGC CACGCCCAAA ATCTTGGACG TGCACTACTA CAGAAATCTC AAGAAAGGGA AGGGCCTACT CAGCTCCGAT CAGACGCTCT GGGCCAGCTC CCTCACGGCC
GACATGGTGG CCTCCTTTTC GAAGAATCCC GAAGTCTGGT TTCACAAGTA CGCCGGAGCG ATGGAGCGAA TGGGTGCCAT CGATGTCCTC ACCGGGAACG AGGGGAAGAT CAGGGTCAAA
TGCTCTGTCG TCAACGGCCA CTGA
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Retrieve as FASTA
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