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Entry information : LminAPx[P]02(Lemmin1g0006470.t1)
Entry ID 18905
Creation 2023-06-13 (Christophe Dunand)
Last sequence changes 2023-06-13 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2023-06-21 (Christophe Dunand)
Peroxidase information: LminAPx[P]02(Lemmin1g0006470.t1)
Name LminAPx[P]02(Lemmin1g0006470.t1)
Class Ascorbate peroxidase    [Orthogroup: N/D] N/D
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Lemna minor    [TaxId: 4472 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LminAPx[P]02
start..stop		 S start..stop
LminAPx01 201 2.93e-67 1..98 149..246
LminAPx03 195 4.46e-65 1..98 149..246
AhAPx02 190 4.75e-63 1..98 146..243
ZpAPx01 190 5.86e-63 1..98 149..246
Literature and cross-references LminAPx[P]02(Lemmin1g0006470.t1)
Protein sequence: LminAPx[P]02(Lemmin1g0006470.t1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   98
PWM (Da):   %s   10849.45  
PI (pH):   %s   4.32
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MGLNDQDIVA LSGGHTLGRA HKERSGFEGP WTFNPLIFDN SYFKELLTGE KEGLLQLPTD KALLDDPVFR PLVEKYAADE DAFFADYAEA HLKLSELG 

Retrieve as FASTA  
Remarks Incorrect prediction from Lemna.org. Only last 4 exons have been found
Promoter►
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Send to cis Analysis
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CCTCCGATGG CTGTGATACC AATTTGATGC AGGACAACAT CAATGAGAGG CCCTTCCTCG GCGGCGGCGA TGGCGGAACG CCGGCGGAGC CGCCGAGGGA GAGCTCAAAA CTAGGCTACG  AAAGGAAAAC TCTCTAAAAC GCTCTAAGGA GGACTACCGA TACTCTAATT CTCAAACTTC ACTTTGATTT CACCATATGG CCTTAGGGGA TCCCCTCCTC CTTAAATAGG AGTTTGAGTG  GGCTGAGGGG AGGGGGACCC CTTAATGAGC GTAATACAAC CCTTAATAGG CCTAATACAA ACCATACGCT CCTCCCTCCT TATTGGGCCC AAACAGTGGC CCAAAAAGGA AAGAAGGACT  AAAGCAAATG ATAAAGGGAA ACACACATAC TATGGGCCCA TTAACACACC AATGGCCCAA TAAGCAAAAA CGGAAACACA CAAACACACG GCGATGATGC CTTGCACGAG AAACCAAAGG  ACGACGAAGA CCATGAAGGG GGAGAAGTGG CGCATCGACG TCTTGGCGGC AGTCAGCGGG TCTGCCTTGC ATTGCCGTCT TTGTGGCGAT CTTGCGCCGA AGAGGTGGCC TGTGCCACTG  GCGGTTTGCG GGCAGTTTCT CTGGCCGGTT AGGGTGCTGG ACGACGTCTT GTTTGCTTCT TCTTCTCTCC CTTCCTCTCT TCATGATGTC TTCGGTAGCT TTGGTGCGGG AAGGGATCAA  CCGGTAGCAT CATCGGATGG TCCGCCATCA TCTTGCGTAT GGCGGCGTCG ATAGGGGCAC ACCAATAGGC AGATGGCAGC GATGGACAAA TAGTGAGGAC GACGGTGGCA ATCAAGGGGT  AGATGGCAGT GATGATTCAA TAACCATCAA GAAGAGGAAG AAGGTAGAAA AAAATGAACT GCATGTCTGT GGCAGTAGGT AGAATCGTCT GCAATGATGG CATCAACAAT AGGAGAAGAA  AGATGGTATT AGAGCAAACC CTAGAGGGTT TACTCTAATA CCATGTGTGT AGCAATATAG TACAAAATAT GAGGAAAGGG ACCCTCTGGC TTATATATAA GGTAGGGGAG TAGTACAAGT  GGTAAATACA AAAATAAAAA TAAAAATAAT ATGTACGATT AGCCCATGAG GTTGATCATA CTCTCATAAT GAGAAATATT TCCTACAATA GTATGATTCA CATAATATGA TTTGCATGCA  TTGGAATGTG AAGAGACTTG AGAGAGAGAT AAATATTATG AGAGGGATAA GGCATGTTCT CAAAATTCAA GTTTTACATG CTTCGATGAT ATTTTCAAAT ATTCTCGGCG ATCATTTTGA  AGTCTCAACA AGATCATTTC AAGTTGTTGA ATTAAGTAGG ATTATGTTTT GATGAATTTA TTCATATGTT CGAGTTCGAT AAACTATATA ACTTATGTTA TATCAAAAAT TTAAAAATTA  TTTATGATTG AATGTCATTA AAAGTTAACA TGCCTATCAT TCACACGAGC ATACATCGAG GCCATGTTGA GAGGAAATCC ACACCAACTC GCGAGCATCA CTCCAAGCAT CCAAACATTG  ATGATATAAT TCAACTCCTC TCTCCGAAGT TAGGTTTAAG CCCGAAGTTC TTTTGATATG GAAGGCATGA AGACATTATT TTTATAGATG CTAAGCAAGA TGATTTCATC TCGATCATTG  TCTATAAAAA TTGAATAAAC ATTGATATAA TCATCTTAAA AAGTAATATA TAGACGATAG GATGGAAATC AGAAGGAGAA GGAAGGAAAA CAGTACCGAT CGCAGGAGAA GGAACAGTCG  ATGATCATAA TGAGTACGAA AACAAGATGA ACGAGCACAG ATCGAAGCTC AAAGAAACAC AATTCCTCGA CCATACCGTT CGTCCTGCAA CTGTAATCGG ACGCCTTCTC CCTCGCCAGA 
CGAAGAAATG CGGAGAATGA AAGACTGATC TCCGAAGCAG CGCAGATTTA TACAGAAGAG AGAGAAACAA GACAGAGGAA 

Retrieve as FASTA  
Terminator +►
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Send to cis Analysis
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GAAAGAATAC CAAAACAAAA ATCCATCAAT TCTATGACCA CAAATTTTCC ATTTCCCGGC CGGCGCTCAT TCTCTCGTCG CATATTGTCT CACCAGCTAC GCCGAAGCTT AAGATGACGT  GGAAGGAGCC TGCGCCTCGG TCGCTCATAA AAATATAGAG AGAGAGAGAG AGAGCTTGAC AGTTACCGGG CGGAAGGGAG AAGGACGGAC TCGCTGAAAG AAGATAGATC AGCAGCGGAG  AGCGGCGGGT CCCCCAGGTG CGGGGATGTC GAAATATCAA TGTCGTCGTC GCCTCCCGAC TCCACCCCCC GTTCAATTGC GATCGCCTCG CGAAGTTCCC TTAGAATCTC GGACATGGCC  GGCCTCGACG AGCCGTGCTG GTGCACGCAC ATGAGCGCCT TTTCCGCAAT CTTCCACACC GACTGCACGT TATACTCGTC CATCGCCGGG TCTATTATCC CCTGGATGTT CCCGCTCTCT  ATGTGCGCTC TCGCCTGGCA ATTCCTCAAA ATTAATTAAT CCCTCTTTCT ATTATTCATT AATTAAATGA ACCCGATCTT CTACTCACCC AAGGGACGAT GTTACGACAG TTGACCCCGA  ACCGCTCGTT GGATATCGCC TGTTGACCGG AGATCAGCTC CAGGAGGATC ACCCCGAAGC TGTACACGTC GCTCTTCTCA GTCAACTGCT GTGACACGTA GTACCTGTTG ATCGGTGATC  ATTAGATTTT ACTAATTTTT GAAATTATAT TAAATTATAA TCAGGCACGT GCGTACTCGG GATCGAGATA TCCAACGGTT CCTCGCACGA TGCTGGACAC GTGGGAGGAG CCATCGACGG  CCAGCTTAGA GAGACCAAAG TCGGAGACCT TGGCCCTCAT GTTCTTGTCC AGCAATATGT TGCTGCTCTT CAGATCCCGA TGGATCACTG CCGGTGTGCA CCCCGTGTGG AGATATTCTA  TCCCTGCAGA ACACCATAAG AGACATACTG AAGACTCAAG TAACATTTTT ACGATGTACC TCGTCCCGCG TCTTCAGCGA GCTCCAGCCT TTTGACCCAA CTTAAGGTTT GCTCTCGCGT  GAAGCATCCT GAATGAAAAC CATAGTTGGC GAAATATCAG CATTTTAAAT TAAAAAGGAA CAATGTTTGT TATTTTTCTT AAATTTTGCT GAATTGGGAA ACCCAACCAA AGAGATGGTC  CTTGAGAGTG CCGTTGTGCA TAAACTCGTA GACGAGTATG TTCTTCCCTC CCTCCTGGCA GTACCCAAGG AACGAGACCA GATTCCTGTG ATGAATTCTC GACAGCAGAG ATACCTGAAA  TAGAACATTA GATATAAAAA TGGTATTTTA TGGCAAACTC AACCGAATGA GAATTTTACC TCGTTGGAGA ATTCCCTGGT TCCCTGGTAT GAGTCGTTGG TCAGAAGTTT TACCGCAATT  TCTCTCCCAT CCTGCAACTT CCCATAGTAC ACCACGCCGT ACCCACCGGA CCCGATCATG CGGTCAAACT TTCCAGTGGC TTCTTCCAGC TCAGTCAACG GGAAGCAGTG GGACGTCTGC  GGGGACACGC CGCTAAGGTA GGAGATGAGC TTCCTTGAAG TGGGGCCCGT GCTTGAATTA TCTGCAAATC ATGAAAGGTA GGTACGGTTG ATATAAAGTG CTTGCATCTA GTGAAGAGAG  TCACACCTTA TATAGGCATA CCACACGGCA CAAATCACCA AAATACCCCT CAACTGACTA ATGACCAAAA TACCCCTTGA CTAGGTGCCC ACCTTTGGAC AGTTCCTTCT TCTCCTTTCT  TTTGAGTGCA AACAAGAAAC AAGCAAACAG AGCGAGGAGC AGCAGTCCTG ATCCAAGAAC CACGAGTGCA ATTATGATAG ATTTGTTCTT GGCCTTTCCT TGGCGAAGAT TCGCGTTTCC 
AGAGATGCTA AAAGTAAATA TAATAGATAA ACACGTCAAG TTGGTTATAG TACGACAAGA TCAAGTAATC ATAAATAAAT 

Retrieve as FASTA  
DNA ►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGATTGCCT TCCGTACGAA TTCCATGGCG ATTTGCGGCG GGCTCGAGAG GCGGCATGGG CGAAGGGAAG ATGGGGGCGG GGCCCTCGCC TCCATCGCCG CCCGCCTCTC CGCAGTTCAA  CGATTCTTCG TGCCGTTGTG GAATAACAAA AATAACAAAA GCTGCGTTCG GCATTTCGTG TCGTTGACCA GTCAAACTGA GCCGGTTCAG TCTGGTTCGT ACTGACGGGA GTCGGATGTC  GAGCCGGGAT AGGGCAGGCC AGTCCGCGGC TCGGATGGCG AGACGACGGA ATGGAATATC TCGATTTCTG GTCCCCGGGA GAAAGAACAC GCGCGGTCGG TAACGGACAA TTTTGATGCG  GTCACCTCCC GTGAGTTTAA GAAATTAACT CCGAGAAGGA TAGATGTGTA ATTAAAAAAA ATCCTGGGTT TTTTGAATTG TGATCTTAAA TGCGCTCAGC CGATCACCGG CGGTGAGATT  ACTCTTTAGC CGGCAAGTTC TAGGTTCGAA CAGTTTAGAC TGTTGACGCT GGGAAGGGAT AGATAACTAA TTAAATAAGA TACTTGGGGT TTTTTGTAAT CTCGAAACGT GATGTATATG  TAGTTAAATA AGTTGGAGGG TTGTTTTTGA AGTGATGAAT TTAAGAGAGG GAGAAAGTTG AATAAGAGTA GAGCTGCAAA AGGAAAGGGG GCAAAATGGG GCCTGGTAAT GGCTACTGGC  GGGAGGGACT TGCTTGGGGA GGAAGGATCC AGAGGGAGGA GAAAGGAGAA GTAGATGCGG GGAGCATCTG CTCCTGGTCC CACGCCAAGT GGCAGAAAAT GTGATAATCT TGACAGCGAA  GGATCCTCTC CTTTCCTCGC GTCCTTTCCC GTCAATTGTA GGATTCCTCT GCCCTCCAAA GCAAAGTGCC TCTCCGAAAA TAATTCACAA TCCTGTTCGC GATAGGCAGA TCTGATACAA  GGTTTGAATT TGCTGATGAG AGAGGTTTTT GCTGCGGTAT CGTGTTGGAA AATGCTGCGG AATCCTGTTC GCGGTCCGGA TCTGATGCAA GGTTTGAATT CGCGCGCCGG AGGGATTGTC  TTCATTCTTG TCTAGTTTTT CGCTTCCTGA TGTAGGACGT CTGCCGAGGA ATCTGAATTT GTGTTGGGGA TAGATCCGGA GGTAATAATG GCGACAGGTG AGCGCGATCT CCCACTGCGA  GGGGGTGGAG AATGGTTGCA GGAAATGCCG AGAATAAAAT ATGCTGTTGT TGTTCTCTGT AGCAGTGGGA AGTGGGGCCC GATCTCGTGG ATAGAACTAG GGCTCGGAGG TGGCGATTTC  AGTCGGAGAT TCACAGATGT ACGTTTTAAA CTCCTTTTTC TAGCACCATC TGCCCATCTC CACTATGTGA TCTATGGGGT CCATCATCGC CAGAGAGGGG GACCCAGCCA ACTGCCGAAG  AAAGGAGAGG ACGTCTGTCG CACGTGTGAG GGGCGTCAAC GCCCCCAACA GACTTGAGGT ACGACTACAG TCCACACGAA CATCAAGATC CAGGCAGATG GGCCTCAATG ATCAGGACAT  CGTCGCTCTA TCCGGCGGCC ACACCTTGGT TCGTCCGTAA CCAATCCCAT AAACCCATTT ATTAATAAAA TTAAAAAAAT AACGCATTTT TTTATTTTGT TTTTCCTACA TTTGGCAGGG  TAGGGCGCAC AAGGAGAGAT CCGGCTTCGA GGGTCCTTGG ACCTTCAACC CTCTCATTTT CGACAACTCC TACTTCAAGT GAGCAGATTC TCTCTGTTAC ACCCCCACCC TCTCTCTCCC  CCTGTAACTT GCTCTTATCT CTCGCGATCG CATAGGGAGC TTCTGACAGG AGAGAAGGAA GGCCTGCTCC AGCTGCCGAC CGACAAAGCC CTTCTCGACG ACCCCGTCTT CCGCCCTCTC  GTAGAGAAAT ACGCGGCTGT AAGTTCATAC TCTTCTTCGC ACCCCCACTC TCCCTCGATT AACCCTTTCT CTCCCTGACT CGTCATCGAC GCACAGGACG AGGATGCGTT CTTCGCGGAT 
TACGCGGAGG CCCATCTGAA GCTATCCGAG CTCGGGTAA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGATTGCCT TCCGTACGAA TTCCATGGCG ATTTGCGGCG GGCTCGAGAG GCGGCATGGG CGAAGGGAAG ATGGGGGCGG GGCCCTCGCC TCCATCGCCG CCCGCCTCTC CGCAGTTCAA  CGATTCTTCG TGCCGTTGTG GAATAACAAA AATAACAAAA GCTGCGTTCG GCATTTCGTG TCGTTGACCA GTCAAACTGA GCCGGTTCAG TCTGGCAGAT CTGATACAAG GTTTGAATTT  GCTGATGAGA GAGGTTTTTG CTGCGGTATC GTGTTGGAAA ATGCTGCGGA ATCCTGTTCG CGGTCCGGAT CTGATGCAAG GACGTCTGCC GAGGAATCTG AATTTGTGTT GGGGATAGAT  CCGGAGGTAA TAATGGCGAC AGGTGAGCGC GATCTCCCAC TGCGAGGGGG TGGAGAATGG TTGCAGGAAA TGCCGAGAAT AAAATATGCT GTTGTTGTTC TCTGTAGCAG TGGGAAGTGG  GGCCCGATCT CGTGGATAGA ACTAGGGCTC GGAGGTGGCG ATTTCAGTCG GAGATTCACA GATATGGGCC TCAATGATCA GGACATCGTC GCTCTATCCG GCGGCCACAC CTTGGGTAGG  GCGCACAAGG AGAGATCCGG CTTCGAGGGT CCTTGGACCT TCAACCCTCT CATTTTCGAC AACTCCTACT TCAAGGAGCT TCTGACAGGA GAGAAGGAAG GCCTGCTCCA GCTGCCGACC  GACAAAGCCC TTCTCGACGA CCCCGTCTTC CGCCCTCTCG TAGAGAAATA CGCGGCTGAC GAGGATGCGT TCTTCGCGGA TTACGCGGAG GCCCATCTGA AGCTATCCGA GCTCGGGTAA 

Retrieve as FASTA