Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
263 |
| PWM (Da): |
30251.16 |
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| PI (pH): |
8.78 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MSYTFVTTSC FCTISDSTLR LKSSKLVNLS KHQRRCTLKS RGGLKVEAYY GLKTPPYPLD ALEPYMSRRT LEVHWGKHHR GYVDNLNKKL GKDDRLYGYT MEELIKATYN NGNPLPEFNN
AAQVYNHDFF WESMQPGGGD MPQKGVLEQI DKDFGSFTNF RERFTNAALT QFGSGCVWLV LKREERRLEV VKTSNAINPL VWDDIPIISL DVWEHSYYLD YKNDRAKYIN TFLNHLVSWN
AAMSRMARAE AFVNLGEPNI PIA
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Retrieve as FASTA
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| Remarks |
Incorrect prediction from braker3. Splicing error. CDS need to be corrected |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGTTATA CTTTTGTGAC GACAAGCTGT TTCTGTACAA TATCAGATTC TACTCTACGT TTGAAATCTT CCAAGCTCGT CAATCTGGTT CGATTCATTT TGAATTCCTT ATGAGACATT
GAAAGACATT TTCAAAGTTT TCAATCACTA AAACTTTCAA ATTTCGTTCC CCCCTATGTT TAGAGTAAAC ATCAGAGAAG ATGCACTCTT AAGTCTCGAG GTGGTTTAAA GGTTGAAGCT
TACTATGGTC TAAAGACACC TCCTTATCCA CTTGTAAGTG CAAACTAAAC ATTTCATTAC TTTTTGCTTA CGAATTCTAA TTGTAGTATC TATGTTTTCA TTCTGTAATC TATTTGCTGT
TGTCGATTAA TCACAGAATT GAGAAAAGTT TGTTAATTTT GGGTGAATTG TTCTGGTGGG TTGTTGGCAA AGTTGTATTT GGATCTGTGT ATCATCTCTC TTGCAATGTA CATGGTTAGT
GATTATAAGG ACTTTGGTGA TATGCCAAAG AAGATGCTTT AGTTGAGATT CTAATCAGAG TCTAAAAACA AATGTGAATA GGATGCTTTG GAACCGTATA TGAGTCGCAG AACACTAGAA
GTGCATTGGG GTAAACATCA TCGAGGTTAT GTGGATAATC TGAATAAAAA AGTTAGGGAA AGATGATAGA CTCTATGGAT ACACCATGGA AGAGCTTATC AAGGCTACAT ACAACAATGG
GAATCCTTTG CCCGAGTTCA ACAATGCTGC GCAGGTACTT AATTTATAAG TTTCTTGTAC TTACATCACC TGAGGAACTT GCTAATGTTG GGGTAATGTT GTTGTTTAGG TCTATAACCA
TGATTTCTTT TGGGAGTCGA TGCAACCTGG TGGTGGAGAC ATGCCTCAAA AGGGTGTTCT TGAGCAGATT GACAAAGATT TCGGTTCATT CACAAATTTC AGAGAAAGGT TCACTAATGC
AGCTCTTACT CAGTTTGGTT CCGGCTGCGT CTGGCTCGTC TGTGAGAAAC TTTACAAGCC TTTCACTTGT TATTAATAGA CCGGAAACTA TAGAATGACT CAGAAAGTGG GAAATCTCGA
TTCTTTATTT GAAATTGCAG TGAAGAGGGA AGAGAGAAGA CTTGAGGTGG TCAAAACCTC AAACGCCATT AACCCACTCG TGTGGGACGA TATTGTATGT TAGATTTTTA TTAGTTAGTT
TTCTTGATGA ATTCGACGTT ACCTTTTGAT GACATATCTT TTGTTGTTAC AGCCAATCAT CAGCTTGGAT GTGTGGGAGG TAAAACATCT CCTCTCTTCC CTCATACTCT CAAGTAATAC
TTAGAAAAAA AAAAAAAAAA AATCTTCTAA TGTCTTTCTT TTTATATTCT TACTTTGCAG CATTCTTATT ATCTGGACTA CAAGGTAAAA AGTAGCTTCA ATTTCAACCA TTCTGTCTTC
TTTTTGTTTG TTCAAAAGGC TAAAACGAGT GTGTGTGTGT GTGTGTTTTG GTTGCTAGAA CGACAGGGCT AAGTATATAA ACACTTTTCT GAACCACTTG GTGTCGTGGA ACGCTGCTAT
GAGTCGAATG GCTCGTGCAG AAGCGTTTGT GAATCTTGGT GAACCAAACA TCCCAATCGC TTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGTTATA CTTTTGTGAC GACAAGCTGT TTCTGTACAA TATCAGATTC TACTCTACGT TTGAAATCTT CCAAGCTCGT CAATCTGAGT AAACATCAGA GAAGATGCAC TCTTAAGTCT
CGAGGTGGTT TAAAGGTTGA AGCTTACTAT GGTCTAAAGA CACCTCCTTA TCCACTTGAT GCTTTGGAAC CGTATATGAG TCGCAGAACA CTAGAAGTGC ATTGGGGGAA AGATGATAGA
CTCTATGGAT ACACCATGGA AGAGCTTATC AAGGCTACAT ACAACAATGG GAATCCTTTG CCCGAGTTCA ACAATGCTGC GCAGGTCTAT AACCATGATT TCTTTTGGGA GTCGATGCAA
CCTGGTGGTG GAGACATGCC TCAAAAGGGT GTTCTTGAGC AGATTGACAA AGATTTCGGT TCATTCACAA ATTTCAGAGA AAGGTTCACT AATGCAGCTC TTACTCAGTT TGGTTCCGGC
TGCGTCTGGC TCGTCTTGAA GAGGGAAGAG AGAAGACTTG AGGTGGTCAA AACCTCAAAC GCCATTAACC CACTCGTGTG GGACGATATT CCAATCATCA GCTTGGATGT GTGGGAGCAT
TCTTATTATC TGGACTACAA GAACGACAGG GCTAAGTATA TAAACACTTT TCTGAACCAC TTGGTGTCGT GGAACGCTGC TATGAGTCGA ATGGCTCGTG CAGAAGCGTT TGTGAATCTT
GGTGAACCAA ACATCCCAAT CGCTTAA
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Retrieve as FASTA
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