Sequence Properties
first value : protein
second value (mature protein) |
| Length (aa): |
 |
265 |
| PWM (Da) |
|
28645.54 |
|
| PI (pH) |
|
8.64 |
Update Perox 19103 Properties = '265;8.64;28645.54'
signalp /usr/local/bioinfo/src/SignalP/signalp-4.1/signalp -m ./assets/temp/tmp_mature ./assets/temp/tmp_pep 2>/dev/null
|
|
Sequence
Send to BLAST
Send to Peroxiscan
|
| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAASSSFKSG GVFFSKSDYF PLQSKRLSSA ASSFSRIQFP RTSSGKSCSP FLTSSSSSAS VHTVQASVCI SKSMRWWEKT LKPNMIEVHS AQELVNYLLD AGDRLVILDF YSPGCGGCKA
IHPKICQLAE LNPDALILKI NYEELKRMCH ALHVHVLPFF RFYRGAEGKV CSFSCTNATI KKFKDAVAKH GNDRCSLGPA KGLDESELKK LVEAGEISID LPVEVPVAAK EEKVEELVMK
AIDRSSSSGR GGKAAAAETG MELVR
|
Retrieve as FASTA
|
|
| Remarks |
|
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTGCTT CTTCTTCTTT TAAGTCCGGT GGCGTCTTCT TTTCCAAGTC CGACTATTTT CCTCTTCAGT CCAAGCGCCT TTCATCAGCT GCTTCTTCTT TCTCCAGAAT TCAGTTTCCC
AGGACGTCGT CTGGGAAATC TTGTTCACCC TTCCTCACCT CCTCCTCCTC TTCCGCTTCT GTTCATGTAA GTTCCTTTCC ACTAATTCAG AAAATTTGCT TCTGTTTTTT TTTGTTTTAT
GTAAAATTCG ATTTCTAATC GTAGCTTTTT CTTTTTATTT TGACTTTTTT TTATAGACGG TTCAAGCATC TGTCTGCATC AGTAAATCGA TGAGATGGTG GGAGAAAACC CTTAAACCTA
ATATGATTGA AGTCCACTCT GCGCAAGAGT TGGTCAATTA TTTGCTCGAC GCCGGCGACA GATTGGTCAT TCTTGACTTC TACTCCCCCG GCTGCGGTGG CTGTAAAGCT ATTCACCCTA
AGGTAATAAA TTAATTGAGA TTGGAAATTG TTTAATTGCA GAACTGATCG AATTTTAGGC AACCTTACTG ACTTTTTCTT TCAATGGCAG ATATGTCAGC TTGCCGAATT GAATCCGGAT
GCTCTAATTC TCAAAATCAA TTACGAAGAA CTCAAGAGAA TGTGTCATGC TCTTCACGTC CATGTCCTGC CATTCTTCAG ATTCTACAGA GGAGCTGAAG GCAAAGTTTG TAGCTTCAGC
TGTACCAATG CAACTGTAAG CTTCCATCTC CTAGTTTATT AGCAGCCACA AATTTTAGAG TGAAGCTGTG TGAATTAGTT CTAAGATTAT TGTTTGTTAT GGATGTACAG ATTAAGAAAT
TTAAAGACGC TGTGGCGAAA CACGGCAATG ATCGGTGCTC GCTTGGGCCA GCGAAAGGTC TCGATGAATC GGAGCTGAAG AAACTGGTAG AAGCGGGTGA GATCTCAATT GATTTACCAG
TAGAAGTACC AGTAGCTGCA AAGGAGGAAA AGGTGGAGGA ATTGGTTATG AAAGCTATAG ATAGATCATC ATCAAGCGGC AGGGGGGGCA AAGCTGCTGC TGCTGAAACT GGCATGGAGC
TTGTAAGATG A
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTGCTT CTTCTTCTTT TAAGTCCGGT GGCGTCTTCT TTTCCAAGTC CGACTATTTT CCTCTTCAGT CCAAGCGCCT TTCATCAGCT GCTTCTTCTT TCTCCAGAAT TCAGTTTCCC
AGGACGTCGT CTGGGAAATC TTGTTCACCC TTCCTCACCT CCTCCTCCTC TTCCGCTTCT GTTCATACGG TTCAAGCATC TGTCTGCATC AGTAAATCGA TGAGATGGTG GGAGAAAACC
CTTAAACCTA ATATGATTGA AGTCCACTCT GCGCAAGAGT TGGTCAATTA TTTGCTCGAC GCCGGCGACA GATTGGTCAT TCTTGACTTC TACTCCCCCG GCTGCGGTGG CTGTAAAGCT
ATTCACCCTA AGATATGTCA GCTTGCCGAA TTGAATCCGG ATGCTCTAAT TCTCAAAATC AATTACGAAG AACTCAAGAG AATGTGTCAT GCTCTTCACG TCCATGTCCT GCCATTCTTC
AGATTCTACA GAGGAGCTGA AGGCAAAGTT TGTAGCTTCA GCTGTACCAA TGCAACTATT AAGAAATTTA AAGACGCTGT GGCGAAACAC GGCAATGATC GGTGCTCGCT TGGGCCAGCG
AAAGGTCTCG ATGAATCGGA GCTGAAGAAA CTGGTAGAAG CGGGTGAGAT CTCAATTGAT TTACCAGTAG AAGTACCAGT AGCTGCAAAG GAGGAAAAGG TGGAGGAATT GGTTATGAAA
GCTATAGATA GATCATCATC AAGCGGCAGG GGGGGCAAAG CTGCTGCTGC TGAAACTGGC ATGGAGCTTG TAAGATGA
|
Retrieve as FASTA
|
|
