Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
329 (304) |
PWM (Da): |
35619.33 (32915.9) |
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PI (pH): |
9.49 (9.78) |
Peptide Signal: |
cut: 26 range:26-329 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MARFDIVLLIGLCLIISVFPDTTTAQLSRGFYSKTCPNVEQIVRN AVQKKIKKTFVAVPATLRLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGDGFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVVVAAGGPSYEVELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQEDMIA LSAAHTLGFAHCGKVFKRIHKFNGINSVDPTLNKAYAIELQKACPKNVDPRIAINMDPVTPKTFDNTYFKNLQQGKGLFTSDQVLFTDGRSRPTVNAWASNSTAFNRAFVIAMTKLGRVG VKNSSNGNIRRDCGAFN |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo 3, 3 introns), 4 cDNA and 16 ESTs. Mainly from roots. |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AGCTGGTAAT GGGAAAATAT AAGTTGTCTT ATCTCCTATT TTCCTTTCGT TTTATTAATG TTTGAATGTT CATTTTGACG ATGAGAAGAT ATTATTGGTT TTTCATTTGT TTTGTTTATG
TCTTCATTTT AAGAAGGCAA TTGTATCTGA TCCTCTCTAC TTTGTATCTC CAACATGTTT ATTCTCGCTA CAAATTTAAA TAACTATATA CTATTCAATT TTTCCTATTA TAATAAGTTT
TCACTGTTAT CACTAAGCCT ATTCACGGAA AAATATCTAT GTAAACTAAA AGTGCTTATG AAGATGTAAA ATATGTTTAG TCATAATAAC GATTATTTTT CAACGTTAGA ATGTTTTGAA
CTAGTACAAA ACAATTGACA CTAGATTAGA ACAAAAAAAA AAGTTAATAA AAAATATTAT TAAATTGTAA TTAGATCAGA AATTAAAGCA ATGCTATTCT ACTATATTAG GTATCCAATT
AAAACGCTAA TTAAATTAAA TCAACCTGAT TTAAATGGGA ACCCAAACGG TAGCAAACAC AACACTATGA CCTTTCCACG TCAGCACGAG ACTCTCGTCG TCGTCTTCCT TCTTCATTCC
CCACCCGACA GCGTGCTCCT CCAGCATCGC CTTCACATCC GCCACCGCAT CTTCTTTAAC CCTAACTCCA CCGAACTCAG CCTCTCTCAT TCTCTCTATC CACCGTCTCT TCGTCTCCGT
CCTCTCCACT CTCTCCGCAC CTTCCTTCGC CACCACGTTT TCTATCTTCC AACTTATCTC CGCCTCGTAC CACCGTCTCT GCTCACTCAT AAACGTGTCC GTCGTATCGA ACGGAATCCA
GAAGTAGTTA AACGCCGATT TTAACCGGTT AACCAAGTTC TCCGATGTGA GATCTACGTC TTCTTCGATT AGGGTTACGA TTCTTGGATT CAAAGATCGG AGTTGTTTCA AGAAAACTGT
TCGGAGCGAT GATGATGATG AAGTTAGGGG TTCTTCAGGG
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Retrieve as FASTA
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DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCTCGCTTCGATATTGTTCTACTCATAGGTCTTTGCCTCATAATCTCTGTCTTTCCCGATACAACCACCGCACAACTAAGCCGCGGTTTCTACTCCAAAACTTGCCCCAATGTCGAA CAAATCGTGAGAAATGCTGTCCAAAAGAAAATAAAGAAGACATTCGTCGCCGTCCCTGCCACTCTCCGTCTCTTCTTCCACGACTGCTTTGTCAATGTATGTTTCTATTTAAGCGTTTTC ATATCTTTTTTCTCCTCTTTCATTAGGCGATTAATTGGTACCTTTGGCGTAATTGGCATTGTAGGGGGTTGTGATGCATCTGTCATGATCCAATCAACGCCTAAGAACAAGGCAGAGAAG GATCATCCAGATAACATTTCGCTAGCTGGAGATGGATTTGATGTGGTGATCCAAGCTAAGAAAGCCCTTGACTCTAACCCTAGTTGCCGGAACAAGGTCTCATGTGCCGATATTCTTACT TTGGCCACCCGAGATGTTGTTGTTGCGGTGAGTATTTGTACTAGCCTTACTATAACCAGATAATTAATCCTAAACAAAATTTCACATTAATATTAGTATATCACATTGCTTGTTTAGAAA TGTTTTATATAACAAGGTTTTACGCATGTATAGGCGCTGGAGGACCGTCCTATGAAGTTGAACTTGGTAGGTTCGATGGTTTGGTATCAACCGCGTCAAGTGTCGAAGGGAACTTACCAG GACCTTCGGACAATGTAGACAAACTTAATGCTCTTTTCACGAAAAACAAACTTACCCAAGAAGATATGATTGCTCTTTCAGGTAAACCAAATTTAAATCAAAACATCTTATATAGTTATA TGTATTTATATCACCAAGATGCATCGATGTCTAAACCGATAAATTCATAATGTAGCGCGGCTCACACCCTTGGATTCGCACATTGTGGCAAGGTCTTTAAAAGAATCCACAAATTCAACG GCATCAACTCCGTGGACCCAACTTTAAACAAGGCTTACGCTATTGAGCTTCAAAAGGCTTGTCCTAAGAATGTGGACCCAAGAATTGCAATCAACATGGACCCAGTCACGCCCAAGACGT TTGACAACACTTACTTCAAGAATCTTCAACAAGGCAAAGGTCTCTTCACCTCCGATCAAGTTCTCTTCACGGATGGTCGCTCTAGGCCCACCGTTAATGCTTGGGCCTCAAACTCTACGG CCTTTAACCGCGCTTTTGTGATAGCCATGACCAAACTTGGCCGTGTTGGAGTTAAGAATAGCAGCAATGGAAACATCCGTCGTGATTGTGGTGCGTTTAACTAG |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCTCGCTTCGATATTGTTCTACTCATAGGTCTTTGCCTCATAATCTCTGTCTTTCCCGATACAACCACCGCACAACTAAGCCGCGGTTTCTACTCCAAAACTTGCCCCAATGTCGAA CAAATCGTGAGAAATGCTGTCCAAAAGAAAATAAAGAAGACATTCGTCGCCGTCCCTGCCACTCTCCGTCTCTTCTTCCACGACTGCTTTGTCAATGGTTGTGATGCATCTGTCATGATC CAATCAACGCCTAAGAACAAGGCAGAGAAGGATCATCCAGATAACATTTCGCTAGCTGGAGATGGATTTGATGTGGTGATCCAAGCTAAGAAAGCCCTTGACTCTAACCCTAGTTGCCGG AACAAGGTCTCATGTGCCGATATTCTTACTTTGGCCACCCGAGATGTTGTTGTTGCGGCTGGAGGACCGTCCTATGAAGTTGAACTTGGTAGGTTCGATGGTTTGGTATCAACCGCGTCA AGTGTCGAAGGGAACTTACCAGGACCTTCGGACAATGTAGACAAACTTAATGCTCTTTTCACGAAAAACAAACTTACCCAAGAAGATATGATTGCTCTTTCAGCGGCTCACACCCTTGGA TTCGCACATTGTGGCAAGGTCTTTAAAAGAATCCACAAATTCAACGGCATCAACTCCGTGGACCCAACTTTAAACAAGGCTTACGCTATTGAGCTTCAAAAGGCTTGTCCTAAGAATGTG GACCCAAGAATTGCAATCAACATGGACCCAGTCACGCCCAAGACGTTTGACAACACTTACTTCAAGAATCTTCAACAAGGCAAAGGTCTCTTCACCTCCGATCAAGTTCTCTTCACGGAT GGTCGCTCTAGGCCCACCGTTAATGCTTGGGCCTCAAACTCTACGGCCTTTAACCGCGCTTTTGTGATAGCCATGACCAAACTTGGCCGTGTTGGAGTTAAGAATAGCAGCAATGGAAAC ATCCGTCGTGATTGTGGTGCGTTTAACTAG |
Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATCATTTCAA AAGCAATTCT TCTTGTCTTG GCTCAATTTA TATACAACAC TCTCTCTCTC TCGGTTTTGT CCATACAATG GCTCGCTTCG ATATTGTTCT ACTCATAGGT CTTTGCCTCA
TAATCTCTGT CTTTCCCGAT ACAACCACCG CACAACTAAG CCGCGGTTTC TACTCCAAAA CTTGCCCCAA TGTCGAACAA ATCGTGAGAA ATGCTGTCCA AAAGAAAATA AAGAAGACAT
TCGTCGCCGT CCCTGCCACT CTCCGTCTCT TCTTCCACGA CTGCTTTGTC AATGGTTGTG ATGCATCTGT CATGATCCAA TCAACGCCTA AGAACAAGGC AGAGAAGGAT CATCCAGATA
ACATTTCGCT AGCTGGAGAT GGATTTGATG TGGTGATCCA AGCTAAGAAA GCCCTTGACT CTAACCCTAG TTGCCGGAAC AAGGTCTCAT GTGCCGATAT TCTTACTTTG GCCACCCGAG
ATGTTGTTGT TGCGGCTGGA GGACCGTCCT ATGAAGTTGA ACTTGGTAGG TTCGATGGTT TGGTATCAAC CGCGTCAAGT GTCGAAGGGA ACTTACCAGG ACCTTCGGAC AATGTAGACA
AACTTAATGC TCTTTTCACG AAAAACAAAC TTACCCAAGA AGATATGATT GCTCTTTCAG CGGCTCACAC CCTTGGATTC GCACATTGTG GCAAGGTCTT TAAAAGAATC CACAAATTCA
ACGGCATCAA CTCCGTGGAC CCAACTTTAA ACAAGGCTTA CGCTATTGAG CTTCAAAAGG CTTGTCCTAA GAATGTGGAC CCAAGAATTG CAATCAACAT GGACCCAGTC ACGCCCAAGA
CGTTTGACAA CACTTACTTC AAGAATCTTC AACAAGGCAA AGGTCTCTTC ACCTCCGATC AAGTTCTCTT CACGGATGGT CGCTCTAGGC CCACCGTTAA TGCTTGGGCC TCAAACTCTA
CGGCCTTTAA CCGCGCTTTT GTGATAGCCA TGACCAAACT TGGCCGTGTT GGAGTTAAGA ATAGCAGCAA TGGAAACATC CGTCGTGATT GTGGTGCGTT TAACTAGAGC TGGTAATGGG
AAAATATAAG TTGTCTTATC TCCTATTTTC CTTTCGTTTT ATTAATGTTT GAATGTTCAT TTTGACGATG AGAAGATATT ATTGGTTTTT CATTTGTTTT GTTTATGTCT TCATTTTAAG
AAGGCAATTG TATCTGATCC TCTCTACTTT GTATCTCCAA CATGTTTATT CTCGCTACAA ATTTAAATAA CTATATACTA TTCAATTTTT CCTATT
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Retrieve as FASTA
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