Entry information : AtPrx39 (At4g11290 / PER39 / AtperoxP39 / ATP19a / AtP19 / Atatp19a)
| Entry ID | 205 |
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| Creation | 2006-02-10 (Filippo Passardi) |
| Last sequence changes | 2015-06-03 (Christophe Dunand) |
| Sequence status | complete |
| Reviewer | Achraf Jemmat |
| Last annotation changes | 2015-11-09 (Achraf Jemmat) |
Peroxidase information: AtPrx39 (At4g11290 / PER39 / AtperoxP39 / ATP19a / AtP19 / Atatp19a)
| Name (synonym) | AtPrx39 (At4g11290 / PER39 / AtperoxP39 / ATP19a / AtP19 / Atatp19a) | ||||||||||||||||||||||||||||||||||||
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| Class | Class III peroxidase [Orthogroup: Prx007] | ||||||||||||||||||||||||||||||||||||
| Taxonomy | Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis | ||||||||||||||||||||||||||||||||||||
| Organism | Arabidopsis thaliana [TaxId: 3702 ] | ||||||||||||||||||||||||||||||||||||
| Cellular localisation | N/D |
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| Tissue types | Mixed tissues Roots Roots endodermis Rosettes |
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| Inducer | N/D |
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| Repressor | N/D |
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| Best BLASTp hits |
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| Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '205' 'join(6869993..6870202,6870447..6870641,6870724..6870886,6871064..6871476)' |
Exons►
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Literature and cross-references AtPrx39 (At4g11290 / PER39 / AtperoxP39 / ATP19a / AtP19 / Atatp19a)
| Literature | REFERENCE 1 Tsukagoshi H, Busch W, Benfey PN. Transcriptional regulation of ROS controls transition from proliferation to differentiation in the root. Cell. 2010 Nov 12;143(4):606-16.
REFERENCE 2 Kim BH, Kim SY, Nam KH. Genes encoding plant-specific class III peroxidases are responsible for increased cold tolerance of the brassinosteroid-insensitive 1 mutant. Mol Cells. 2012 Dec;34(6):539-48. |
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| Protein ref. | UniProtKB: Q9SUT2 |
| DNA ref. | Phytozome 12: Chr4 (6869993..6871476) |
| mRNA ref. | GenBank: NM_117200 |
| Cluster/Prediction ref. | Phytozome Gene 12: 19648416 UniGene: At.22642 |
| Omic ref. | AtProteome: At4g11290 ATTED-II: At4g11290 e-FP Browser: At4g11290 ePlant: At4g11290 Genevestigator: At4g11290 TAIR: At4g11290 |
Protein sequence: AtPrx39 (At4g11290 / PER39 / AtperoxP39 / ATP19a / AtP19 / Atatp19a)
| Sequence Properties first value : protein second value (mature protein) |
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| Sequence Send to BLAST Send to Peroxiscan |
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| Remarks | Complete sequence from genomic (chromo 4, 3 introns), 4 cDNA and 22 ESTs. Mainly found in roots. | ||||||||||||
| Promoter► Send to BLAST Send to cis Analysis |
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| Terminator +► Send to BLAST Send to cis Analysis |
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| DNA ► Send to BLAST |
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| CDS► Send to BLAST |
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| cDNA► Send to BLAST |
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