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Entry information : PtaPrx16(PTA00042703)
Entry ID 2052
Creation 2007-02-14 (Christophe Dunand)
Last sequence changes 2007-02-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-29 (Christophe Dunand)
Peroxidase information: PtaPrx16(PTA00042703)
Name PtaPrx16(PTA00042703)
Class Class III peroxidase    [Orthogroup: Prx024]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue types Roots
Xylem
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx16
start..stop		 S start..stop
PabPrx88 624 0 4..331 7..333
PtaPrx61 607 0 2..331 7..336
PpPrx20 581 0 28..331 1..304
PabPrx95 522 0 57..331 1..275
Literature and cross-references PtaPrx16(PTA00042703)
Literature Sederoff,R., Molecular Basis of Wood Formation in the Pine Megagenome, unpublished
EST ref. GenBank:   DR051349 [5' end]  DR052270 [3' end]
Cluster/Prediction ref. UniGene:   Pta.30471  Pta.31501
Protein sequence: PtaPrx16(PTA00042703)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   331 (307)
PWM (Da):   %s   35338.4 (33062.2) Transmb domain:   %s   i5-27o
PI (pH):   %s   5.58 (5.28) Peptide Signal:   %s   cut: 28 range:25-331
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGASSLSVVV IAVLVGMLQH LGGGASGQLV YNFYRYSCPY VENIVLNVVR SAVQNDTRMA ASLLRLHFHD CMVNGCDASV LLDDTDTITG EKSALPNLNS ARGFEVIDAI KTALENSCNA  TVSCADILAI AARDSVYLSG GPYWQVQMGR RDGTTASKSA ANADIPSPIE SLGSLISKFQ GVGLSVQDLV VLSGAHTIGR AHCGTFSSRL FNFSGSNSAD PTIQQSLLQD LQSLCPDGNS 
DPNTLAPLDP VTKDKFDNVY FRNLQNNSGL LQSDQALFST TNASTAFFVN YYSSFPYAFS RDFPTSMVKM ANISVHTGSD GEIRKNCRFV N 

Retrieve as FASTA  
Remarks Complete sequence from genomic (incorrect prediction, contains two ORFs coding for two CIII Prxs) and 10 + 27 ESTs (two unigenes).. Few mismatches between DNA and ESTs.
DNA ►
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