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Entry information : PtaPrx21(PTA00009024)
Entry ID 2057
Creation 2007-02-14 (Christophe Dunand)
Last sequence changes 2007-02-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-25 (Christophe Dunand)
Peroxidase information: PtaPrx21(PTA00009024)
Name PtaPrx21(PTA00009024)
Class Class III peroxidase     [Orthogroup: Prx016]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type Roots
Inducer Drought
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx21
start..stop		 S start..stop
PtaPrx21-2 635 0 1..323 1..323
PgPrx05 559 0 1..323 9..328
PabPrx139 559 0 1..323 9..328
PtaPrx123 480 1.17e-172 1..323 1..323
Literature and cross-references PtaPrx21(PTA00009024)
Literature Pratt,L. et al., An EST database from untreated loblolly pine (Pinus taeda) roots, unpublished
EST ref. GenBank:   DR055602.1 [3' end]  CF666458 [Fragment]
Cluster/Prediction ref. UniGene:   Pta.14351
Protein sequence: PtaPrx21(PTA00009024)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323 (303)
PWM (Da):   %s   34265.59 (32053.3)  
PI (pH):   %s   8.92 (8.57) Peptide Signal:   %s   cut: 21 range:21-323
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MALRLVKSLV LFAFLQPITA KSGLQVGFYK TKCPQAESIV RGVVTSFFNA DKSIPAGLLR MHFHDCFVRG CDASVLIDPV GNMVPEKAAF PNLSLRGFNI IDAAKTAVEK RCPGVVSCAD  ILALATRDGV ALAGGPQYSL PTGRRDGTIS SINDVNLPGP SSLVSDAAAA FSAKGLSISE MVTLLGAHTV GNALCSFFSD RLYSFQGSGT ADPSMDPTLV VKLKQVCPSP TSSSTQDPNV 
FLDQNTSFIF DNSYYKQLQL NRGILQIDQE LASDKTTKNT VTSFATNGNV FSKSFVAAII KMGNIQVLTG NNGQIRKNCR AVN 

Retrieve as FASTA  
Remarks Complete sequence from genomic ( incorrect prediction, PTA00009024 contains two ORFs) and 3 ESTs. 5'is missing.
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCACTTA GACTCGTAAA ATCCCTTGTC CTCTTCGCTT TTCTGCAACC CATAACGGCA AAATCCGGGC TCCAGGTGGG ATTTTACAAG ACAAAGTGTC CGCAAGCAGA ATCCATCGTG  CGGGGAGTAG TCACAAGTTT CTTTAATGCA GACAAGTCTA TTCCTGCTGG ACTCCTGCGC ATGCATTTTC ATGACTGTTT TGTAAGGGTA AGATGATAAT TATGGTCTGC GTCTTTCATT  TAAACATATT ACGTTACTCG TTGAAATAGA ATTCTTACAA AGGTTCACTG GTATTGCTAA TGAATAACGT TGATTTACGC TGTTAATTAA AGGGCTGCGA CGCATCAGTT CTGATTGATC  CTGTAGGCAA TATGGTACCA GAGAAAGCGG CATTCCCAAA TCTATCGCTG AGAGGATTTA ATATAATCGA TGCAGCAAAA ACGGCTGTCG AAAAAAGATG CCCGGGTGTT GTCTCTTGTG  CTGATATACT TGCGCTTGCT ACCAGAGACG GTGTTGCCCT GGTATAAATT TCCTTCAAAT TTGCCATCTA AAACAGCTAA TCTTATTTAC AGTTTGAACT TTCATAAATC TAACGATTAG  ATATATAGAA TAGAAAAGTG TTTTTCTTCA ACTAACAGAG CAGTATAAAA GAAGATAAGT GTATAGTATA ATTAAGCAGA TAAAAAAATT ATGCATAGCC TAAACAGACT ATTTTTCTTT  GCCAGGGAAA TTTTGGTAAA ATTTGCCATG GAAATTTTTG TAAAATTTAA TAAAATTGGG AATGGATTTT TGTAAATCTA GATTATAGTT GTCAAACTAA AGGTTTTGGA TACCTCAATC  TATTTCCACT ATCAAAAACA TGATCCAAAC AATGCTATTG CAAAAAAAAA TATTTTAGAA TTTTTAATTT TTTTTGCCCT TACCACTATT CACTGTTACT GCAATTCCTC CATCTAAGTA  GACACTTCCA AAAATGATGA ATGGTTTAGA TTTACTAATT TAAAAATATG TTTTTAATAT AGATAATGTG GAAATATTTG ATTTCCAAAA TATTTTCATT ATAAATATnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnATTTTTT TATAAGTAAG TGTTTTTGTG GAGTTTAGTC TCTATTAAAT TATAAGTTCA AAATTTATGA GGAAGAGTTA GAGGATAGAA ACTACTTTTA  AGGAAAATAA ACGATGCCAA GAAGCGTTTA AGCTCCACCA TCTTAGTGAT AGTATCCACT TCCACTTCCT AATGATAACT TCCTATTATA AAAAGTTAGT ATTCCATCCA ACATTAAACC  CTTAGTTATT TCCAATTACT ATAATAAGTT CACATACATA TAAAACACTA ATAATTATAC CTATAAACTT AGCTTTGTTG GATGCAATAA CATAAGCATT CTAACTTGGT TGAAGCTTTT  ACAGGCAGGA GGGCCACAAT ACAGTCTACC AACGGGAAGA AGAGATGGAA CCATATCTTC AATAAACGAT GTGAATTTAC CCGGTCCTAG TTCTCTCGTT TCTGATGCAG CTGCAGCATT  CTCTGCCAAG GGTTTGAGCA TCTCAGAAAT GGTCACTCTA CTAGGTAAGT AGTATTAATT ATACTAGATA TATATCTTTT AAGCGTTTTG AAGCAATTTT CATGATTAGC TTATATCTTA  CCCACCCAAT TAATTTAGGT AAAACTGAAT TAATTTTCAA TAGAGTTATG TAAATAGGTC ACGAATTCCC TTAGAAAAGA GTGGAAATTT TTGTATGTGT TTTTTTTTCC TAAATTCTTA  TTGGAAATCT AGGTTACCAT TTTCAAACTT CAAATTTTTT AATAAGTGAA TTTTGTGTAA CTCCAGGCGC TCATACCGTT GGGAACGCCC TCTGCAGTTT CTTTAGCGAT CGACTCTACA  GTTTCCAAGG AAGCGGGACT GCGGATCCTT CTATGGATCC AACCTTAGTG GTGAAGCTGA AGCAAGTCTG CCCATCTCCG ACGTCGTCTT CAACACAAGA CCCCAACGTA TTTCTGGACC  AGAACACTTC GTTTATCTTC GACAACAGCT ACTATAAACA ACTGCAATTA AACCGTGGAA TTCTTCAAAT TGATCAGGAA CTCGCGTCTG ACAAAACAAC CAAAAACACT GTCACGAGCT  TTGCCACCAA TGGAAATGTG TTTAGTAAGA GCTTCGTCGC CGCCATCATA AAAATGGGAA ACATCCAAGT ATTAACTGGC AACAACGGAC AAATTCGAAA GAATTGCAGA GCCGTGAATT 
GA 

Retrieve as FASTA  
CDS►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCACTTA GACTCGTAAA ATCCCTTGTC CTCTTCGCTT TTCTGCAACC CATAACGGCA AAATCCGGGC TCCAGGTGGG ATTTTACAAG ACAAAGTGTC CGCAAGCAGA ATCCATCGTG  CGGGGAGTAG TCACAAGTTT CTTTAATGCA GACAAGTCTA TTCCTGCTGG ACTCCTGCGC ATGCATTTTC ATGACTGTTT TGTAAGGGGC TGCGACGCAT CAGTTCTGAT TGATCCTGTA  GGCAATATGG TACCAGAGAA AGCGGCATTC CCAAATCTAT CGCTGAGAGG ATTTAATATA ATCGATGCAG CAAAAACGGC TGTCGAAAAA AGATGCCCGG GTGTTGTCTC TTGTGCTGAT  ATACTTGCGC TTGCTACCAG AGACGGTGTT GCCCTGGCAG GAGGGCCACA ATACAGTCTA CCAACGGGAA GAAGAGATGG AACCATATCT TCAATAAACG ATGTGAATTT ACCCGGTCCT  AGTTCTCTCG TTTCTGATGC AGCTGCAGCA TTCTCTGCCA AGGGTTTGAG CATCTCAGAA ATGGTCACTC TACTAGGCGC TCATACCGTT GGGAACGCCC TCTGCAGTTT CTTTAGCGAT  CGACTCTACA GTTTCCAAGG AAGCGGGACT GCGGATCCTT CTATGGATCC AACCTTAGTG GTGAAGCTGA AGCAAGTCTG CCCATCTCCG ACGTCGTCTT CAACACAAGA CCCCAACGTA  TTTCTGGACC AGAACACTTC GTTTATCTTC GACAACAGCT ACTATAAACA ACTGCAATTA AACCGTGGAA TTCTTCAAAT TGATCAGGAA CTCGCGTCTG ACAAAACAAC CAAAAACACT  GTCACGAGCT TTGCCACCAA TGGAAATGTG TTTAGTAAGA GCTTCGTCGC CGCCATCATA AAAATGGGAA ACATCCAAGT ATTAACTGGC AACAACGGAC AAATTCGAAA GAATTGCAGA 
GCCGTGAATT GA 

Retrieve as FASTA