Entry information : AtPrx40(At4g16270 / PER40 / AtperoxP40)
| Entry ID | 206 |
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| Creation | 2006-02-10 (Filippo Passardi) |
| Last sequence changes | 2015-06-03 (Christophe Dunand) |
| Sequence status | complete |
| Reviewer | Christophe Dunand |
| Last annotation changes | 2020-03-04 (Christophe Dunand) |
Peroxidase information: AtPrx40(At4g16270 / PER40 / AtperoxP40)
| Name | AtPrx40(At4g16270 / PER40 / AtperoxP40) | ||||||||||||||||||||||||||||||||||||
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| Class | Class III peroxidase [Orthogroup: Prx030] | ||||||||||||||||||||||||||||||||||||
| Taxonomy | Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis | ||||||||||||||||||||||||||||||||||||
| Organism | Arabidopsis thaliana [TaxId: 3702 ] | ||||||||||||||||||||||||||||||||||||
| Cellular localisation | N/D |
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| Tissue types | Flowers Inflorescences Siliques |
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| Inducer | N/D |
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| Repressor | N/D |
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| Best BLASTp hits |
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| Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '206' 'join(9205038..9205364,9205564..9205755,9205836..9206001,9206080..9206483)' |
Exons►
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Literature and cross-references AtPrx40(At4g16270 / PER40 / AtperoxP40)
| Literature | REFERENCE 1 Tsukagoshi H, Busch W, Benfey PN. Transcriptional regulation of ROS controls transition from proliferation to differentiation in the root. Cell. 2010 Nov 12;143(4):606-16.
REFERENCE 2 Jacobowitz JR, Doyle WC, Weng JK. PRX9 and PRX40 Are Extensin Peroxidases Essential for Maintaining Tapetum and Microspore Cell Wall Integrity during Arabidopsis Anther Development. Plant Cell. 2019 Apr;31(4):848-861. |
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| Protein ref. | UniProtKB: O23474 |
| DNA ref. | Phytozome 12: Chr4 (9205038..9206483) |
| mRNA ref. | GenBank: NM_117724 |
| Cluster/Prediction ref. | Phytozome Gene 12: 19647397 UniGene: At.50347 |
| Omic ref. | ePlant: At4g16270 TAIR: At4g16270 |
Protein sequence: AtPrx40(At4g16270 / PER40 / AtperoxP40)
| Sequence Properties first value : protein second value (mature protein) |
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| Sequence Send to BLAST Send to Peroxiscan |
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| Remarks | Complete sequence from genomic (chromo 4, 3 introns), 6 cDNA and 4 ESTs. Related to flowers | ||||||||||||
| Promoter► Send to BLAST Send to cis Analysis |
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| Terminator +► Send to BLAST Send to cis Analysis |
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| DNA ► Send to BLAST |
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| CDS► Send to BLAST |
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| cDNA► Send to BLAST |
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