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Entry information : PtaPrx27(PTA00020461)
Entry ID 2072
Creation 2007-09-05 (Christophe Dunand)
Last sequence changes 2007-09-05 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-25 (Christophe Dunand)
Peroxidase information: PtaPrx27(PTA00020461)
Name PtaPrx27(PTA00020461)
Class Class III peroxidase     [Orthogroup: Prx021]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type Roots
Inducer Drought
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx27
start..stop		 S start..stop
PpPrx06 648 0 7..342 1..335
PtaPrx19 624 0 1..342 1..342
PtaPrx133 524 0 7..343 1..322
PabPrx30 514 0 1..341 1..339
Literature and cross-references PtaPrx27(PTA00020461)
Literature Pratt,L. et al., An EST database from loblolly pine (Pinus taeda) roots recovering from drought stress, unpublished.
EST ref. GenBank:   CF387989.1 [5' end]  CF388014.1 [Fragment]
Protein sequence: PtaPrx27(PTA00020461)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   342 (327)
PWM (Da):   %s   37027.66 (34215.2) Transmb domain:   %s   i13-35o
PI (pH):   %s   7.03 (5.88) Peptide Signal:   %s   cut: 23 range:23-349
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MRIETAMAKT DQYSALLALL LYAGLAAGVN GALEVGFYDH SCPKAESTVF EVVRDAFLKS REVAPGLIRM HFHDCFVRGC DGSVLIDSIA NNTAEKDSPV NNPSLHGYDV IDTAKSRLEA  ICPNTVSCAD ILAFAARDST KLASPHKHTL SWDVPAGRRD GIISLASEVA TNIPAPTFNV SQLTQSFASK GLSQKDMVIL SGAHSIGVSH CTSFVTRLYN FSTTIPTDPS LDPMLADILK 
KKCPQGSPSN NITTVFMDTY TPETIDNLYY NGLLEKHGLF TSDATLLTDR NTATVVKASA GRRHLRTWQE RFAAAMVSMG KIIELTGNEG EIRRKCSVIN SS* 

Retrieve as FASTA  
Remarks Complete sequence from genomic and 2 ESTs (fragments, Unigene Pta.31047 contains other sequences (PtaPrx06)).
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCGTATTG AAACGGCAAT GGCGAAAACC GATCAGTACT CGGCCCTTCT TGCTCTGTTA CTTTATGCTG GTTTGGCAGC GGGTGTTAAT GGGGCTCTTG AAGTGGGTTT CTACGATCAC  AGTTGTCCAA AAGCGGAATC CACTGTGTTC GAAGTTGTGA GAGATGCATT CCTGAAGAGT CGAGAAGTAG CTCCTGGACT CATAAGAATG CATTTCCATG ATTGTTTCGT CAGGGTAGGC  TTCAATATTC CATCATTAAA TTTTGATAAG ATATCAACAT TCTGGAAATG CAAGTTTTCA CAGTCCTTCA TAACGCTTTG GGCTATTTCT AGACGTTTCA CACTCAATAT CAACAGATTT  TCCTCTCCAT CTCTATTCCT ATCTATCTAG ATATATGTGC CTCCGCTAAT CGTTATCCAT TATCACCATC TACTCCCGAT CTGTAACTCA TGAGTCCAAT TCTAATTATA AGTTATAGTG  TATTTGAATG TTGAAATCAT GACTGCTTTC AGGGATGCGA TGGGTCTGTT CTCATAGACT CCATTGCCAA CAACACTGCG GAGAAAGATA GCCCTGTTAA CAATCCGAGC CTTCACGGAT  ATGACGTGAT TGATACAGCG AAATCGAGAT TAGAGGCCAT CTGCCCAAAC ACTGTTTCTT GTGCAGATAT CCTAGCATTT GCTGCCAGAG ATAGCACAAA GCTGGTAAGG ATATCACAAA  TTATAAAATG TTACAGTTTT ACTACAGGAG TCTACACAAG GATTTAAGGT TTTATTAATT TAAAGTATCA AAAGTATTTC AATTTTCTGT CCCCAAATGT TTCAAATAAC GTTATAAAAT  AATACAAATG TCTCTGTAGT TACCATTGTA CAGATATCGT CCGAATATAA GTCTATTTAC CGTTTATATG ATACTGAAGC AAGCGACAAT GTGTTTTCTA ATTTACCTCA ACAACATATT  TAATTAGCAA AACAATGTTG AACAAAAATT AATTCTTTTA TAATTGATTG CAGGCATCGC CACATAAACA TACTCTGAGC TGGGATGTTC CTGCTGGACG AAGGGATGGA ATTATTTCAC  TGGCTTCAGA AGTCGCCACA AATATACCTG CCCCTACCTT CAATGTCAGC CAGTTGACAC AGAGTTTTGC ATCCAAAGGT CTATCCCAGA AGGACATGGT TATACTCTCA GGTGCATACA  ATTTTTTGTG AATGTATTGA TGTATGTACA TTTATGGTTG TGAAGTAAGA TCTTGCATCG CAATAACATA CAGATACACT AGAGTAAAAC AGTAACCATA TATCATATCA GGGATTGAGA  TTTCAATGGT TAGTAAAAAT ATTGTAATTT GTATATTCAT CGCTGTAATT TGTAATGTTC ATCCATGAGT GGTTGTATTG ATGCAGGAGC ACACTCAATT GGTGTCTCTC ATTGCACTTC  ATTCGTGACC AGGCTCTACA ACTTCAGCAC CACTATTCCG ACGGACCCAT CTCTTGATCC TATGCTTGCT GACATACTGA AGAAGAAGTG TCCTCAGGGA AGCCCCAGCA ACAACATCAC  GACCGTGTTC ATGGATACAT ATACGCCTGA AACTATCGAC AATCTCTACT ATAACGGCCT TCTAGAGAAA CATGGTTTGT TTACCTCCGA TGCAACGCTG CTCACTGATC GAAACACCGC  AACCGTAGTC AAAGCAAGCG CTGGCCGGCG TCACTTGCGC ACGTGGCAAG AAAGGTTTGC CGCTGCCATG GTCAGTATGG GAAAGATCAT CGAATTGACA GGCAACGAGG GAGAAATTCG 
TCGGAAGTGC AGTGTCATCA ATAGCTCATA G 

Retrieve as FASTA  
CDS►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCGTATTG AAACGGCAAT GGCGAAAACC GATCAGTACT CGGCCCTTCT TGCTCTGTTA CTTTATGCTG GTTTGGCAGC GGGTGTTAAT GGGGCTCTTG AAGTGGGTTT CTACGATCAC  AGTTGTCCAA AAGCGGAATC CACTGTGTTC GAAGTTGTGA GAGATGCATT CCTGAAGAGT CGAGAAGTAG CTCCTGGACT CATAAGAATG CATTTCCATG ATTGTTTCGT CAGGGGATGC  GATGGGTCTG TTCTCATAGA CTCCATTGCC AACAACACTG CGGAGAAAGA TAGCCCTGTT AACAATCCGA GCCTTCACGG ATATGACGTG ATTGATACAG CGAAATCGAG ATTAGAGGCC  ATCTGCCCAA ACACTGTTTC TTGTGCAGAT ATCCTAGCAT TTGCTGCCAG AGATAGCACA AAGCTGGCAT CGCCACATAA ACATACTCTG AGCTGGGATG TTCCTGCTGG ACGAAGGGAT  GGAATTATTT CACTGGCTTC AGAAGTCGCC ACAAATATAC CTGCCCCTAC CTTCAATGTC AGCCAGTTGA CACAGAGTTT TGCATCCAAA GGTCTATCCC AGAAGGACAT GGTTATACTC  TCAGGAGCAC ACTCAATTGG TGTCTCTCAT TGCACTTCAT TCGTGACCAG GCTCTACAAC TTCAGCACCA CTATTCCGAC GGACCCATCT CTTGATCCTA TGCTTGCTGA CATACTGAAG  AAGAAGTGTC CTCAGGGAAG CCCCAGCAAC AACATCACGA CCGTGTTCAT GGATACATAT ACGCCTGAAA CTATCGACAA TCTCTACTAT AACGGCCTTC TAGAGAAACA TGGTTTGTTT  ACCTCCGATG CAACGCTGCT CACTGATCGA AACACCGCAA CCGTAGTCAA AGCAAGCGCT GGCCGGCGTC ACTTGCGCAC GTGGCAAGAA AGGTTTGCCG CTGCCATGGT CAGTATGGGA 
AAGATCATCG AATTGACAGG CAACGAGGGA GAAATTCGTC GGAAGTGCAG TGTCATCAAT AGCTCATAG 

Retrieve as FASTA