1. Browse the Database
  2. View Redoxidase
Entry information : PtremPrx03
Entry ID 2078
Creation 2007-09-17 (Christophe Dunand)
Last sequence changes 2007-09-17 (Christophe Dunand)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2011-01-28 (Qiang Li)
Peroxidase information: PtremPrx03
Name PtremPrx03
Class Class III peroxidase     [Orthogroup: Prx027]*
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus tremuloides (Quaking aspen)    [TaxId: 3693 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtremPrx03
start..stop		 S start..stop
PtPrx82 439 3.79e-158 1..225 27..251
PtPrx21 411 4.79e-147 1..225 29..253
MePrx64 401 6.43e-143 1..225 28..252
VvPrx65 394 4.57e-140 1..225 27..251
Literature and cross-references PtremPrx03
Literature Ranjan,P., Kao,Y.-Y., Harding,S.A., Jiang,H., Joshi,C.P. and Tsai,C-J. Expressed sequence tags from Aspen. Unpublished (2003).
EST ref. GenBank:   CA926228
Protein sequence: PtremPrx03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   225
PWM (Da):   %s   23798.66  
PI (pH):   %s   5.2
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
FYSSSGPNVE GIVRQAVSHK FGQTFTTIPA TLRLFFHDCF VTGCDASTMV SSPNGDAEKD APDNLSLAGD GFDTVVKAKQ AVEAACPKVV SCADILALAA RDVVVLAGGP SFNVELGRRD 
GMVSQASLVK GNLPEPDFTL SQLTAMFAKN NLNQIDMIAL SGAHTLGFSH CNRFANRLYS FSSSSPVDPS LNAEYAQQLM SACPRNVDPS IAINMDPVTP RTFDN 

Retrieve as FASTA  
Remarks 5' and 3' are missing, frame shift. Partial sequence from 1 singleton.