Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
329 (306) |
PWM (Da): |
35292.84 (32884.4) |
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PI (pH): |
4.92 (4.81) |
Peptide Signal: |
cut: 24 range:24-329 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MGLSKTIPLVLLPILMFGVLSNAQLTSDFYSTTCPNVTAIARGLI ERASRNDVRLTAKVMRLHFHDCFVNGCDGSVLLDAAPADGVEGEKEAFQNAGSLDGFEVIDDIKTALENVCPGVVSCADILAIAAEISVALAGGPSLDVLLGRRDGRTAIRADAVAALPLGPDSLEILTSKFSVHNLDTTDLVAL SGAHTFGRVQCGVINNRLHNFSGNSGQSDPSIEPEFLQTLRRQCPQGGDLTARANLDPTSPDSFDNDYFKNLQNNRGVIESDQILFSSTGAPTVSLVNRFAENQNEFFTNFARSMIKMGN VRILTGREGEIRRDCRRVN |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo 5, introns )3 cDNA and 5 ESTs. Found only in library 10434: RAFL19 |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TAAGTTTTGC ATGGTTAAAT GATCAAACGT AACTTATTGT TATTCATGAA ATAAGTGTTC TTTAGTTTGT GCTTCTCCAC AATTAATTGT TTTTCTTCTT TTGATTTTAT TTACTGTTAA
GCATGCCATT GTTACTTGTA ATTGTAAATC TTATATAATA TTTTTCTTTT TGAAAAAATC CACTATCATG TCTGAAATTA TTATTAGTCC ACCAATGAGG ATTCAACTCC CACCTATGGT
TCATTAGACT GATTCAACGG CATTACTGTT CTTATATACG GAAGAAAAGA AGAATATATC AATATTATGA GGCATGTCGC TTGACCGATT CAAAAAGGTA AATTTTATTA CCTCCCTCGA
TGAGTTAGTT CGTAATTCCT ATCTAAATTT TTTGAAGATG TCTCGACTCA ATATTCTATA ACTTCCACTT CATTAACGTA TGTTTTTTTT CCCCGGCCAA TGTACCACAC AAGTGATTAG
ATCCAAGTTT AAATAAAATG GGAAACCAAA TGTGAGTCAA GTAGTGGAAA AAAGTCACTG AAATTTTCAT TAAAATTTGT TTTGAATTTC GCATATGTTA AGATCCAATG ACACTTTATT
ACGAATCGAT ACTAGCTACC AAAAGGAATT TTAACTAAAG ATTTACCCTA ACAGCCAATA TCAATTTCCA GCACCAAATA AACCCTGAAA GGACCTGAGA AAAGTGGCGT CAAAGGGCCC
AAAGTTGAGT GTGAACGAGA AGATGGAAAA AGACTCATTT CTTTCATTTA GTATTCGAAT CTAGAGGATA GTTGACTCTC CAATTGTCGT TGCCTCTCTG ATTTTTCAGC TCTTTGATTA
TGATTAATTT AGCCATTTCT ATCATTTAGC AAGGAAGATT TGAAAATTTG GCAAAATTTT AGTGGGACAA TGTCGCTTTC AATCTGGAGT ATTTTATCAG ACTCTAGAAT CTACCCCTAA
CTTTATAAAC GAGTGGTGGG AATGTAACCA AAACACGTCG
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Retrieve as FASTA
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DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGGTCTAAGCAAAACTATTCCCTTAGTGTTACTCCCGATTTTGATGTTTGGGGTTTTGAGTAACGCTCAGCTTACCTCTGATTTTTACTCCACGACATGCCCTAACGTCACAGCCATT GCTCGGGGACTGATCGAGCGAGCAAGCCGTAACGACGTCAGACTCACTGCTAAAGTCATGCGTCTTCACTTTCATGACTGTTTCGTGAACGTAAGATATATTTCTACTCAATACCATATG TTTGTGATTGGTTTTGGTTTAGTAATGAAACCAATCGTTTAATGTGCATCAGTCCATGTGATCTTATGATTCATCTTGAATCCAAACCAGCATATATTTATGAATGAATATAACTAAACA TGACTTTACTTTAGGTTTAATGGGGATTAATAATAGTTCATACTCGTTGTTTGACCAAAAAGTGGATTTCAAACAAAAGCAACATTAAAATTAGAGTTTGCATTAGTGGAATCATTTTTC AAGGACAAATTTGACGTTAATTTCTTTTTGATGTTTGATTATATATATGTTTGACTATAGATTCTGTCTTAATTAATGGTTTCATATGGAGAAAGTAACGGTCTTTCTTAACCCAAATTA AAATATCTCCTTTTTTTTCCTTCGCTAATCGTTAACTAAGAAAAGTATAGAGTCTTCGTCAAGAAAACATAATTAGGTTTATTTTGTTAGTGGAATTAGGTTTCTTTAATTTGAAAAGTT AGATATGCATAAAATATTGAAGTCATAGTTTGTGAACACAGGGGGGTGCGATGGTTCGGTACTATTGGACGCTGCTCCAGCGGATGGGGTAGAGGGTGAAAAGGAGGCTTTCCAAAACGC GGGTTCTCTTGATGGATTCGAAGTGATCGATGATATCAAAACCGCCCTCGAGAATGTTTGTCCCGGAGTTGTCTCTTGTGCTGATATCCTCGCTATCGCAGCTGAAATCTCTGTTGCACT GGTAATAACATCATTCTTTAAATTTATGTGCTTTCAGATACCTTTTTTAACCAATGGAAACATAATCATAACCAAATCTCTGTTACCACAGCATTCAAATTGAGAAAAAATATTATGAAA ACATTATAGTAATATACCGTAAAAATTCATACTCTAATGTTTTTATTTATTTGATATCATTTAAGGCGCGGGAGGGCCGTCATTGGACGTATTGCTAGGAAGGAGAGATGGCCGGACAGC GATCCGTGCGGACGCAGTGGCTGCACTTCCACTAGGACCTGATTCTCTCGAGATTCTTACTTCCAAATTCTCCGTACATAATCTTGACACTACCGATCTCGTCGCTTTATCTGGTATTGT ACTTACGCATCTTAATATTTGTTTAGTTTAATTTTGTCATAGGTCATCTTAGAAATATCTTAAGGTACTATGAATCATAATACATATAATGTACGTATTTAGGTGTGCTCATACCTTCGG GAGGGTTCAGTGTGGAGTGATAAACAATCGTCTACACAACTTTAGTGGTAACAGCGGACAGTCCGACCCAAGTATCGAACCGGAGTTCTTGCAAACGTTACGACGACAATGCCCGCAAGG CGGAGATCTCACCGCAAGGGCGAATCTTGATCCTACGAGCCCCGACTCATTTGATAACGACTATTTCAAGAACCTTCAAAACAACCGCGGAGTGATTGAATCAGATCAAATCTTGTTCTC TTCGACAGGAGCGCCTACTGTGTCTTTGGTGAATCGTTTTGCTGAGAACCAAAATGAGTTCTTTACAAATTTTGCGAGATCAATGATCAAGATGGGAAATGTGAGGATTCTCACAGGACG TGAGGGAGAGATACGTAGAGACTGCAGACGCGTCAATTAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGGTCTAAGCAAAACTATTCCCTTAGTGTTACTCCCGATTTTGATGTTTGGGGTTTTGAGTAACGCTCAGCTTACCTCTGATTTTTACTCCACGACATGCCCTAACGTCACAGCCATT GCTCGGGGACTGATCGAGCGAGCAAGCCGTAACGACGTCAGACTCACTGCTAAAGTCATGCGTCTTCACTTTCATGACTGTTTCGTGAACGGGTGCGATGGTTCGGTACTATTGGACGCT GCTCCAGCGGATGGGGTAGAGGGTGAAAAGGAGGCTTTCCAAAACGCGGGTTCTCTTGATGGATTCGAAGTGATCGATGATATCAAAACCGCCCTCGAGAATGTTTGTCCCGGAGTTGTC TCTTGTGCTGATATCCTCGCTATCGCAGCTGAAATCTCTGTTGCACTGGCGGGAGGGCCGTCATTGGACGTATTGCTAGGAAGGAGAGATGGCCGGACAGCGATCCGTGCGGACGCAGTG GCTGCACTTCCACTAGGACCTGATTCTCTCGAGATTCTTACTTCCAAATTCTCCGTACATAATCTTGACACTACCGATCTCGTCGCTTTATCTGGTGCTCATACCTTCGGGAGGGTTCAG TGTGGAGTGATAAACAATCGTCTACACAACTTTAGTGGTAACAGCGGACAGTCCGACCCAAGTATCGAACCGGAGTTCTTGCAAACGTTACGACGACAATGCCCGCAAGGCGGAGATCTC ACCGCAAGGGCGAATCTTGATCCTACGAGCCCCGACTCATTTGATAACGACTATTTCAAGAACCTTCAAAACAACCGCGGAGTGATTGAATCAGATCAAATCTTGTTCTCTTCGACAGGA GCGCCTACTGTGTCTTTGGTGAATCGTTTTGCTGAGAACCAAAATGAGTTCTTTACAAATTTTGCGAGATCAATGATCAAGATGGGAAATGTGAGGATTCTCACAGGACGTGAGGGAGAG ATACGTAGAGACTGCAGACGCGTCAATTAA |
Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATCAACTCCT CTAATAAGCT TCTTCTTTCT ATCCCTCACT TTTACAAACA AAGGGAGACC AAAAATGGGT CTAAGCAAAA CTATTCCCTT AGTGTTACTC CCGATTTTGA TGTTTGGGGT
TTTGAGTAAC GCTCAGCTTA CCTCTGATTT TTACTCCACG ACATGCCCTA ACGTCACAGC CATTGCTCGG GGACTGATCG AGCGAGCAAG CCGTAACGAC GTCAGACTCA CTGCTAAAGT
CATGCGTCTT CACTTTCATG ACTGTTTCGT GAACGGGTGC GATGGTTCGG TACTATTGGA CGCTGCTCCA GCGGATGGGG TAGAGGGTGA AAAGGAGGCT TTCCAAAACG CGGGTTCTCT
TGATGGATTC GAAGTGATCG ATGATATCAA AACCGCCCTC GAGAATGTTT GTCCCGGAGT TGTCTCTTGT GCTGATATCC TCGCTATCGC AGCTGAAATC TCTGTTGCAC TGGCGGGAGG
GCCGTCATTG GACGTATTGC TAGGAAGGAG AGATGGCCGG ACAGCGATCC GTGCGGACGC AGTGGCTGCA CTTCCACTAG GACCTGATTC TCTCGAGATT CTTACTTCCA AATTCTCCGT
ACATAATCTT GACACTACCG ATCTCGTCGC TTTATCTGGT GCTCATACCT TCGGGAGGGT TCAGTGTGGA GTGATAAACA ATCGTCTACA CAACTTTAGT GGTAACAGCG GACAGTCCGA
CCCAAGTATC GAACCGGAGT TCTTGCAAAC GTTACGACGA CAATGCCCGC AAGGCGGAGA TCTCACCGCA AGGGCGAATC TTGATCCTAC GAGCCCCGAC TCATTTGATA ACGACTATTT
CAAGAACCTT CAAAACAACC GCGGAGTGAT TGAATCAGAT CAAATCTTGT TCTCTTCGAC AGGAGCGCCT ACTGTGTCTT TGGTGAATCG TTTTGCTGAG AACCAAAATG AGTTCTTTAC
AAATTTTGCG AGATCAATGA TCAAGATGGG AAATGTGAGG ATTCTCACAG GACGTGAGGG AGAGATACGT AGAGACTGCA GACGCGTCAA TTAATAAGTT TTGCATGGTT AAATGATCAA
ACGTAACTTA TTGTTATTCA TGAAATAAGT GTTCTTTAGT TTGTGCTTCT CCACAATTAA TTGTTTTTCT TCTTTTGATT TTATTTACTG TTAAGCATGC CATTGTTACT TGTAATTGTA
AATCTTATAT AATATTTTTC TTTTTGAAAA AATCCACTAT CATGTCTG
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Retrieve as FASTA
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