Entry information : AtPrx58 (At5g19880 / PER58 / AtperoxP58 / ATP42)
Entry ID 224
Creation 2006-02-10 (Filippo Passardi)
Last sequence changes 2015-06-03 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-11-05 (Achraf Jemmat)
Peroxidase information: AtPrx58 (At5g19880 / PER58 / AtperoxP58 / ATP42)
Name (synonym) AtPrx58 (At5g19880 / PER58 / AtperoxP58 / ATP42)
Class Class III peroxidase    [Orthogroup: Prx099]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis thaliana    [TaxId: 3702 ]
Cellular localisation N/D
Tissue types Flowers
Siliques
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtPrx58
start..stop
S start..stop
AlyPrx58 645 0 1..329 1..329
AhalPrx63 622 0 16..329 1..314
BrPrx58-1Aa_other 613 0 1..329 1..330
TsPrx58-1 610 0 1..329 1..330
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '224' 'complement(join(6720578..6720993,6721103..6721268,6721453..6721650,6722202..6722411))' Exons


exon

Literature and cross-references AtPrx58 (At5g19880 / PER58 / AtperoxP58 / ATP42)
Protein ref. UniProtKB:   P59120
DNA ref. Phytozome 12:   Chr5 (6722411..6720578)
mRNA ref. GenBank:   NM_121995
Cluster/Prediction ref. Phytozome Gene 12:   19668060 UniGene:   At.31241
Omic ref. AtProteome:   At5g19880 ATTED-II:   At5g19880 e-FP Browser:   At5g19880 ePlant:   At5g19880 Genevestigator:   At5g19880 TAIR:   At5g19880
Protein sequence: AtPrx58 (At5g19880 / PER58 / AtperoxP58 / ATP42)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (306)
PWM (Da):   %s   35292.84 (32884.4)  
PI (pH):   %s   4.92 (4.81) Peptide Signal:   %s   cut: 24 range:24-329
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGLSKTIPLVLLPILMFGVLSNAQLTSDFYSTTCPNVTAIARGLI
ERASRNDVRLTAKVMRLHFHDCFVN
GCDGSVLLDAAPADGVEGEKEAFQNAGSLDGFEVIDDIKTALENVCPGVVSCADILAIAAEISVALAGGPSLDVLLGRRDGRTAIRADAVAALPLGPDSLEILTSKFSVHNLDTTDLVAL
S
GAHTFGRVQCGVINNRLHNFSGNSGQSDPSIEPEFLQTLRRQCPQGGDLTARANLDPTSPDSFDNDYFKNLQNNRGVIESDQILFSSTGAPTVSLVNRFAENQNEFFTNFARSMIKMGN
VRILTGREGEIRRDCRRVN

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 5, introns )3 cDNA and 5 ESTs. Found only in library 10434: RAFL19
Promoter
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Terminator +
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Send to cis Analysis
DNA
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CDS
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cDNA
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