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Entry information : BoPrx42_other(Bol028473)
Entry ID 2267
Creation 2008-06-13 (Christophe Dunand)
Last sequence changes 2008-06-13 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-02-27 (Christophe Dunand)
Peroxidase information: BoPrx42_other(Bol028473)
Name BoPrx42_other(Bol028473)
Class Class III peroxidase    [Orthogroup: Prx012]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue types Etiolated seedlings
Seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx42_other
start..stop		 S start..stop
BrPrx42_other 690 0 1..331 1..331
BnPrx42_other 690 0 1..331 1..331
TsPrx42 684 0 1..331 1..331
ThPrx42 684 0 1..331 1..331
Literature and cross-references BoPrx42_other(Bol028473)
Literature Barker,G.C., Sharp,A., Durkin,J., Naylor,R., Edwards,R., Gjetvaj,B. , Lydiate,D. and King,G. Analyis of EST libraries of Brassica oleracea prepared from differing stages of development, Unpublished (2005).
DNA ref. GenBank:   BH929584 [Fragment]
EST ref. GenBank:   AM056857 [5' end]  EH425550 [3' end]
Cluster/Prediction ref. UniGene:   Bol.1009
Protein sequence: BoPrx42_other(Bol028473)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   331 (308)
PWM (Da):   %s   37355.06 (35031.0) Transmb domain:   %s   i189-211o
PI (pH):   %s   7.78 (7.82) Peptide Signal:   %s   cut: 24 range:24-331
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGGKGAMMVA MLCLWALSAT TEAVVMEEEP GLMMNFYKDT CPQAEDIIRE QVKLLYKRHK NTAFSWLRNI FHDCAVESCD ASLLLDSTRR ELGEKEHDRS FGLRNFRYIE EIKEALEREC  PGVVSCSDIL VLSAREGIEA VGGPHIPLKT GRRDGRKSRT DMLESYLPDH NESISVVLEK FKSIGIDTPG LVALLGSHSV GRTHCVKLVH RLYPEVDPSL NPDHVPHMLH KCPDSIPDPK 
AVQYVRNDRG TPMVLDNNYY RNILDNKGLL LVDHQLAHDK RTRPIVKKMA KDQAYFFKEF TRAIQILSEN NPLTGSKGEI RKQCNLANKI H 

Retrieve as FASTA  
Remarks Complete sequence from 3 GSS (BH929584, BZ498516, BH654765) and 45 ESTs.
Promoter►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CACAAACAAT AATAGAGGAG CCTTTAGCTT GACACGTAAT AATATCGTCA AGTTGAATCC TTTTTTATAT AGTTTAACTG TAAACCCTCG CCCTTTAATT TAAATAAAGT GATACTCCTA  ATACGCAACA CTATTCTAAA CGTCTATGCA GTACTAGTAA CCTAAATCAA GTTTTTTTTT TTTTTTGCTA AAAAGGTAAA TATCATATAA ATATAAATGA AAGTTTAGAC TTTGCAAGAA  AGAAAGATCT AATTATGTTA CACCTTGGCA AAAAAGCTAA AAACAAGGTA ATAAACCGAA TGAGGATGAG CCGGACTAGT TTCCACGTAC AGCGCATCCA CTTTTCCATG AGTTTTAGGA  ATTGCTTCCT CTCTCTTCTA GCGGTGATGA TGTTTCGCAT CTCCTTGTCA ATGAATCTGA AGATTGTTTC CGGCGCAAGG ACAAGGTTGT TGTGCAAGAC ATTGTTTCTT TGTTTCCAAA  GATGATATAC TATAGACTGA GCTGACAACC TAAATCAAGT TTAAGCCAAC ATGATTAAAA CAGAAAACGA AGGGAGCAGT CGAGAGATTG CAACGTGGAA GCTTTGGCTA GCTAGTCTCA  TCTTCTTCAA TACCAGTTTG ATTCAGTTTT GTTTGACTTT CTAACTCAGT TTCTCTTCTC ATACCTTGTC TAAGAGTATG GTAAATCACT TTCTTCCCCG TTTAAACTAT GCAAAACATT  GTAGCATTTA AGAGACAGCT TGATATCGGT TATAGGTTTG AACTTGATTC TTTTTCTGAA AAAATGAGAA AAAAATAGTC GAGTAAGGAG TGGTGAACGT GTATTTAATA GCCCATCCCG  AGGATCAAGA TGCAACCAAT ATTTATAAAC TTTACAATGG ATGAGCATAT AAATAATTTA TAGTCTATAG TCTATACTGA CAATTATTAC ATTTAGTAAA CTAGTTGTAA ATATAAATAA  TTTCTGAGAA AAAGTATACA ACTGGAATTG TAATTTTACA ATAAATAACT GAGGTTGCAA AATAAATAAG AATCCACATT GACTTCATCG AAATGAAAGA TTCCCTGATC TAAAGGAGCG  CTATATTTTG AATAATTGCA AATCAACCCG TCAACGATTT CTATTTCAGC TATTACACCC CTTATATTAC ATTTGTTACA GCCGCCCCCT TTGTATTGAG TGACAAAAGA AGTAGATATT  TTTTGTATGT CACACAGGGT CCAGTTACCA GTACCAGTGA TGCACTCGAT GAGACCAAAA TCCAAAACTT ATTGGTTTAG CTAACCAAAA CACCCTTCTA AATTACACAA ATTATCCAAA  ATGCCATCCA CTTTAAAATC TACAACAAAC TTGTGTATTT TCTCATAGGT ACAGTCACTG TGTACTACGT AGCCAACTAG CATTGATAAT ACAAAATGGT TTCATTGATA ATACAAAATG  GTTTTAAATT TCTTACCTAG TTTAATTTTT CCATAAAAAT GTATGTTTAT AAACCTTAAG GTGTTGCCCA AAAAAAAAAC CTTAAGGTAA TTTCAAGTAA ATTTCCACAA AGTAGGTTAT  AAGACAACAG TTAAGAACTT AACATCAAAG TTCATACATA AATATGCAAT TTTTTTTTTT TTTTTTTGTA TAAAATGCTT ACAAATTGTT CGTAGTAGTG TATGCAATAC AATATTCTTA  ATCACGACTG ATAGAATTGA CAACTATTGT AGTCTTATGA TAATAATTTG ATTTCTAAAA TTTAAACAGG AATAATTCAT AAAGTAGAGC TTAATGGTCT ATTAGTATAT GATCATCGAT  GACATAAATA TATATTCGTG GAAACGTGAA AACCTAACCT ACTTGCCTTA GTTTACTATA ACCTCCAAAT TAATAAAATC TTTTTTTTGT TTGAAAAATA AAGAAGAAAA CTGTATTTTC 
CTTTATTTAA GGACGCTGCA TTGCTTGCTC ATCCACTCAA CTCAAGAGTG TAGTGAGAGA GAAGACGAAA GAGAGAAAAG 

Retrieve as FASTA