Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
340 (315) |
PWM (Da): |
37217.67 (34558.2) |
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PI (pH): |
7.36 (7.36) |
Peptide Signal: |
cut: 26 range:26-340 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MQFVNFFPLLALVVISLAGKATVEAATGLNPPVKLVWHYYKLTNT CDDAETYIRYQVEKFYKNDSSIAPKLLRLLYSDCMVNGCDGSILLQGPNSERTAPQNRGLGGFVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDGGTLNADAVDLPSPSISVDESLAYFKSKGLDVLDMTTLLGAHSMGK THCSYVVDRLYNFKNTGKPDPTMNTTLVSQLRYLCPPRTQKGQTDPLVYLNPDSGSSNRFTSSYYSRVLSHNAVLRVDQELLNNDDSKEITQEFASGFEDFRKSFALAMSRMGSINVLTG TAGEIRRDCRVTNANDGA |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo 5, 3 introns). No EST. Containing motif 'YSDC'. |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ACTATATTAT AAATTTTATA TTATGTTTGT CCAAAAAAAA AAAAATTTAT ATTATGTAAT TTTTGTGTGT GTGTGTTTAT AATATAAGTA TAAATTATTT TGATAACAAA ATATTATCAA
TAAGACTCGG AAATAAAGAA GAGAAATTGC ATTCTATGAC AAATTGACAA AACATTAAAA ATTTATAAAG CAACACAATT TACACAAAGA CTATTTGAAA TGCATTATCA TATGTGTAAA
AAACAACAAC ACTCTTAATA AAATGTGACC AAATTAACCA ACCAACAAAA CTACTTGTTA CAAATAACAT TTTATTGTTA CATCGAAACA TATAAATATT GACTAATCTG GCTAACATTG
AAATTGGTAA AATGAAATGG TTGAATAATT GAAAAATGAG ATTATTCAGG AATACACATT GAATGCAAAG ATTACGCATT TCATTTCTGG TAGTAGATCT ATAATCAAAA AAGTGTTTGT
GATTGTTTCA AAAGAAATGA AATAAAAGAT ACGGTAGAGC TAGAAGAGTT ATTGTATGAG GTTTACCCAA TACTAAAAGC AGAAGCGCAT AATAGATTGA TATGAACATC ATAAGCTGTC
CCGCAATAAA ACATGTTGTT GCGATACTTT CTTCCCGGTC TTTGTTTTCC TTCGTCCAAA CTCGGAGAAG AAAGAGATAA GAGGGTCCTA TAGAAAATAT GGTCAGAAAT TCATAATAAA
GTCCGACCAC AATGACCGAA TTTATTATCT TCATGTATAA GGATACTAGA TTACCTAGTA TAAAAGATTG AAAAACCATC ACAAACCTCC CTTTTTTCTT TTCTATTTCA ATTTTTGGAT
TATGATATGA TGATTTTGCA ACGTCAGAAG TGTTGGTTAC TTTGACAAAA ACGCATCGTT TCAAAGATTT TTTTGGCGTA GCCGGAAAGA ACACGTCATC ACCATTAAGC AAAATCCCAA
AGAGATAGTA TTTGCTACTT CGGCTTCGCC TTGAGGGTCT
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Retrieve as FASTA
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DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCAGTTTGTGAATTTTTTCCCACTATTGGCCCTCGTAGTCATAAGCTTAGCCGGAAAGGCTACGGTAGAGGCTGCGACGGGATTGAACCCTCCGGTGAAGCTTGTCTGGCATTATTAC AAACTTACTAACACTTGTGATGATGCAGAGACTTATATTAGATACCAAGTTGAAAAGTTTTATAAGAATGATAGTAGCATTGCCCCAAAGCTGCTTCGTCTCCTCTACTCCGATTGTATG GTTAATGTAAGTAAAAGCAACTAGAACATCAACATTACATTCATTTCTTTTTCATAGCCATTGATCGATGTAAAATGTGTATGTAGGGGGATGTGATGGTTCGATTCTTTTGCAAGGACC AAACTCAGAGAGGACAGCTCCACAGAATCGAGGGCTTGGAGGTTTTGTGATAATCGATAAAATAAAGCAAGTTCTTGAATCACGTTGTCCTGGTGTCGTTTCTTGCGCTGATATCCTCAA CCTTGCCACTAGAGATGCTGTTCACATGGTAAACATATTCATATACTTGAATGTTCTTACTAACGTAGATTTATCGATTTATTTGAACTTTATTGTTTGGTGTTGTTTTGATAAATTCGG TGTAATAATGATTAGGCGCCGGAGCACCGTCTTATCCTGTGTTTACGGGGAGAAGGGACGGTGGGACATTAAATGCAGACGCCGTAGATCTGCCGTCACCGTCCATCTCAGTCGATGAGT CATTGGCATATTTCAAGTCCAAAGGTCTTGACGTTTTGGATATGACTACTCTTCTAGGTATCTCATCATCGTCAATTTTTTTTTCTATTTATTTTTTCCTTTAGAAACAAGCATCTTTCA ATCCACAACCATACGTATTTAAATCAAAATAAGTTTGTAATTATAAGAGTATACACCAAATGAATTGTTGCGTTGCTTTTTGGCCGTTGCGTTTGAACTCTGCAAAAGTATTTTATAAAA ATCTGAAAATGTTAAAATATTAATAAATAAAAACAACTGAGATTGTAGTTCAATTGTCTACCTATGTTTAGTTACTGTAAACACATTTAACTACTTTAAGGATTACAAATATTTGAATTA ATTCTCATCGTATGCAATACTTTAAATAATATAAAATTTACAAGATAGTTTCACATCCTAGAAGAATATCCAAAAAATAGACTAGTAATCCAGAAAGGAAAATATAATCTACAAGCAAAG TGGAGCTAAATAGTCTTGGGTGAATATAACAACCTCTAATAATTGTGTAATTGAACAGGAGAGCACACTCAATGGGGAAGACACATTGTAGCTACGTAGTGGACAGACTATACAACTTCA AGAACACAGGGAAACCAGATCCGACCATGAACACGACATTGGTGTCACAACTTCGATATCTTTGTCCTCCAAGAACACAAAAGGGCCAAACCGATCCACTGGTTTACCTAAATCCAGACT CAGGCTCGAGCAACAGATTCACAAGCTCATACTACTCTCGTGTCTTGTCTCATAACGCTGTTTTACGGGTGGACCAAGAGTTGCTCAACAACGATGACTCGAAGGAGATCACGCAAGAGT TTGCTTCCGGTTTTGAAGATTTCAGAAAGTCTTTTGCTTTGGCAATGTCGAGAATGGGATCTATCAATGTTTTGACGGGAACAGCTGGAGAGATTCGTCGAGACTGCAGAGTTACCAACG CTAATGACGGGGCCTAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCAGTTTGTGAATTTTTTCCCACTATTGGCCCTCGTAGTCATAAGCTTAGCCGGAAAGGCTACGGTAGAGGCTGCGACGGGATTGAACCCTCCGGTGAAGCTTGTCTGGCATTATTAC AAACTTACTAACACTTGTGATGATGCAGAGACTTATATTAGATACCAAGTTGAAAAGTTTTATAAGAATGATAGTAGCATTGCCCCAAAGCTGCTTCGTCTCCTCTACTCCGATTGTATG GTTAATGGATGTGATGGTTCGATTCTTTTGCAAGGACCAAACTCAGAGAGGACAGCTCCACAGAATCGAGGGCTTGGAGGTTTTGTGATAATCGATAAAATAAAGCAAGTTCTTGAATCA CGTTGTCCTGGTGTCGTTTCTTGCGCTGATATCCTCAACCTTGCCACTAGAGATGCTGTTCACATGGCCGGAGCACCGTCTTATCCTGTGTTTACGGGGAGAAGGGACGGTGGGACATTA AATGCAGACGCCGTAGATCTGCCGTCACCGTCCATCTCAGTCGATGAGTCATTGGCATATTTCAAGTCCAAAGGTCTTGACGTTTTGGATATGACTACTCTTCTAGGAGCACACTCAATG GGGAAGACACATTGTAGCTACGTAGTGGACAGACTATACAACTTCAAGAACACAGGGAAACCAGATCCGACCATGAACACGACATTGGTGTCACAACTTCGATATCTTTGTCCTCCAAGA ACACAAAAGGGCCAAACCGATCCACTGGTTTACCTAAATCCAGACTCAGGCTCGAGCAACAGATTCACAAGCTCATACTACTCTCGTGTCTTGTCTCATAACGCTGTTTTACGGGTGGAC CAAGAGTTGCTCAACAACGATGACTCGAAGGAGATCACGCAAGAGTTTGCTTCCGGTTTTGAAGATTTCAGAAAGTCTTTTGCTTTGGCAATGTCGAGAATGGGATCTATCAATGTTTTG ACGGGAACAGCTGGAGAGATTCGTCGAGACTGCAGAGTTACCAACGCTAATGACGGGGCCTAA |
Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCAGTTTG TGAATTTTTT CCCACTATTG GCCCTCGTAG TCATAAGCTT AGCCGGAAAG GCTACGGTAG AGGCTGCGAC GGGATTGAAC CCTCCGGTGA AGCTTGTCTG GCATTATTAC
AAACTTACTA ACACTTGTGA TGATGCAGAG ACTTATATTA GATACCAAGT TGAAAAGTTT TATAAGAATG ATAGTAGCAT TGCCCCAAAG CTGCTTCGTC TCCTCTACTC CGATTGTATG
GTTAATGGAT GTGATGGTTC GATTCTTTTG CAAGGACCAA ACTCAGAGAG GACAGCTCCA CAGAATCGAG GGCTTGGAGG TTTTGTGATA ATCGATAAAA TAAAGCAAGT TCTTGAATCA
CGTTGTCCTG GTGTCGTTTC TTGCGCTGAT ATCCTCAACC TTGCCACTAG AGATGCTGTT CACATGGCCG GAGCACCGTC TTATCCTGTG TTTACGGGGA GAAGGGACGG TGGGACATTA
AATGCAGACG CCGTAGATCT GCCGTCACCG TCCATCTCAG TCGATGAGTC ATTGGCATAT TTCAAGTCCA AAGGTCTTGA CGTTTTGGAT ATGACTACTC TTCTAGGAGC ACACTCAATG
GGGAAGACAC ATTGTAGCTA CGTAGTGGAC AGACTATACA ACTTCAAGAA CACAGGGAAA CCAGATCCGA CCATGAACAC GACATTGGTG TCACAACTTC GATATCTTTG TCCTCCAAGA
ACACAAAAGG GCCAAACCGA TCCACTGGTT TACCTAAATC CAGACTCAGG CTCGAGCAAC AGATTCACAA GCTCATACTA CTCTCGTGTC TTGTCTCATA ACGCTGTTTT ACGGGTGGAC
CAAGAGTTGC TCAACAACGA TGACTCGAAG GAGATCACGC AAGAGTTTGC TTCCGGTTTT GAAGATTTCA GAAAGTCTTT TGCTTTGGCA ATGTCGAGAA TGGGATCTAT CAATGTTTTG
ACGGGAACAG CTGGAGAGAT TCGTCGAGAC TGCAGAGTTA CCAACGCTAA TGACGGGGCC TAA
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Retrieve as FASTA
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