View Redoxidase 2325

Entry information : PpaAPx01 (PP00152G00440 / Phypa1_6-PACid_18071284 / Phypa1_6-PACid_18071320)

Entry ID	2325
Creation	2006-03-04 (Christophe Dunand)
Last sequence changes	2006-03-04 (Christophe Dunand)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2014-12-08 (Christophe Dunand)

Peroxidase information: PpaAPx01 (PP00152G00440 / Phypa1_6-PACid_18071284 / Phypa1_6-PACid_18071320)

Name (synonym)

PpaAPx01 (PP00152G00440 / Phypa1_6-PACid_18071284 / Phypa1_6-PACid_18071320)

Class

Ascorbate peroxidase [Orthogroup: APx2001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella

Organism

Physcomitrella patens [TaxId: 3218 ]

Cellular localisation

Cytosolic

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	PpaAPx01 start..stop	S start..stop
CpuAPx01	477	1.22e-173	1..250	1..250
AangAPx02	465	4.87e-169	1..249	1..249
AangAPx03	460	5.87e-167	1..249	1..249
PpaAPx[P]04	454	2.57e-165	25..246	1..222

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	439494..439578	83	N° 2	439933..439966	32	N° 3	440211..440385	173	N° 4	440572..440637	64
N° 5	440889..440937	47	N° 6	441153..441238	84	N° 7	441396..441475	78	N° 8	441597..441699	101
N° 9	441886..441944	57	N° 10	442073..442088	14
join(439494..439578,439933..439966,440211..440385,440572..440637,440889..440937, 441153..441238,441396..441475,441597..441699,441886..441944,442073..442088)

Literature and cross-references PpaAPx01 (PP00152G00440 / Phypa1_6-PACid_18071284 / Phypa1_6-PACid_18071320)

Literature	Hohe A., Egener T., Lucht J.M., Holtorf H., Reinhard C., Schween G., Reski R.; Submitted (JUL-2002) to the EMBL/GenBank/DDBJ databases.
Protein ref.	UniProtKB: Q8GU36
DNA ref.	Phytozome 12: scaffold_152 (439494..442088)
mRNA ref.	JGI transcript: 63071
Cluster/Prediction ref.	UniGene: Ppa.2912

Protein sequence: PpaAPx01 (PP00152G00440 / Phypa1_6-PACid_18071284 / Phypa1_6-PACid_18071320)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	250
PWM (Da):	27562.99	Transmb domain:	i7-24o
PI (pH):	6.1

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAKSYPNVSEKYAALIEKARRKIRGMVAEKNCAPIILRLAWHGSGTYDQESKTGGPLGTIRFGQELAHGANAGLDIAVNLLQPIKEQFPELSYADFYLAGVVAVEVTGGPTIPFHPGRKD
HETCPVEGRLPDATKGLDHLRCVFTKQMGLTDKDIVVLSGAHTGRCHKDRSGFEGAWTPNPLRFDNSYFQVLLEGEKDGLIMLPSDKALLDEPKTRELVELYADEDKFFEDYAESHMKLS
ELGFAEA

Retrieve as FASTA

Remarks

Complete sequence from genomic (9 introns and 1 extra intron in 5'UTR) and 473 ESTs.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCGAAGTCTTACCCAAACGTCAGTGAGAAGTACGCTGCGCTCATTGAGAAAGCCCGCAGGAAGATACGGGGGATGGTAGCAGAGGTAAGAGGTTACGTCAGTTAAGGTAGGCGCGGC
AAGCTCTAAGATAATGAGATAGTCATTAGATAATGCGCGTGTAATTGTATTGAGGGTCAGTCGAGGTTGTCGACATGGGTATGGTTCAATTCTGGAATGTTGTGCAGTCGACAGCATAGG
TGGTTGAATAAGTAAAAGGTGTGAGCATATTTTTGTGAGTGCTGGCGCGCGTTGATGCTGCACGCATTAGACACTTTTTCTACGATCTGCGTCATAATATTGATAGTAGCTGTGGGGTTA
CGGACCTGTGGGGTGCCATCGGTAGTTTACTACGGATGGGAGATCGTTCTAACCAAGGGTATCAATGTTGTTGATTTGCAGAGAAGAACTGCGCACCGATCATCCTTCGTCTCGCGCGTA
AGTTTTGCGACAAATGCTTTATTTTCTTACACTGTTTTTAAAAAATGTGATCGCGCACTGTAATCTGGAGTAAATTCGCATGGTTTTACATCATTTCGTTTCTGGCGAAAATGTGTTGTT
TGGACAGGATGATGAGAATTGAGTTTAGAATGGAGTTCGGAAGGGGCTCACACGGAGTGCGAGGTAGAGTTGGTAGTTCATTTTTGTTCAGTGAGTGAGCTGTTGCTCTGACTTCTTGCA
GATGGCACGGGTCGGGAACTTACGATCAGGAGTCGAAGACAGGAGGTCCTCTTGGAACCATCCGGTTCGGGCAGGAGCTTGCGCACGGCGCCAACGCGGGGCTGGACATTGCAGTGAATC
TGCTGCAGCCCATCAAGGAGCAGTTTCCGGAGTTGTCGTACGCTGACTTTTACACGCGGTAATGAATAAGAAGCGGGTTTGACGATGGGTGGGGCGAAGTAGGCTAGGTGGTTGCAGCAG
CGTTATTGGGGGGGGGGGTTGCAGGCACTGCAATGAGTGAGGAGGTGGGGAGCTCCAGGAATAGGTGTTGGGATTGGAGTGGGAAGAAGGTTGGATTCTAAGGTTTGATGTCATGCGGTT
GCAGCTGGCTGGAGTCGTTGCCGTGGAGGTGACAGGCGGGCCCACCATTCCTTTTCACCCTGGGCGCAAGAGGTAAGAGCCTGGCTGGGCATTCGGGGAGAAGTGCGAGTTTTGGTGGTT
GCTCCCGAATGCGGGATTCGTGAAGCTGTGATGTTGTGAGAAGCAGGGGAAGTGGCGATTGGGGAGTGAGTCTTGAAGGGTTCTGACGTAGACGTGTGGGATGCGGGTGGAAGTGAGAAG
GTGGGGACAGCGTGGGATGGTTGAGAGCGAAGCGGGACTTAATACTGATGTCCGAGTGTGGTGAATGTGGTGTGTGTGTGCAGGATCATGAGACATGCCCCGTGGAGGGTCGGCTTCCCG
ACGCCACGAAGGGGGTACGTAATCGGGTGGTGTAAGGTGCATTTTGGAGGATGTGAGGGCGATGTTGTTGGGTGTGAGGAGGGATGACGAGTTTCCGGATGCGGGTTGTGTTGATGAGAG
GAGTTTAGATGTGGTTGTCGTGTGCGGCTTCCAGGTGAAGTAGGCATGTGAAGGGGTAGGGGGAGGATATTGGTGGAAGTGACGTGTTGGTGGGCGTGTGGGTGGGCAGGTTTGGATCAC
CTCCGATGCGTGTTCACGAAGCAGATGGGGTTGACGGATAAAGACATTGTGGTGCTGTCGGGTGCACACACTCTGTGGTAGGACATGGTGGGAATCGGGAGTGCCGAGATGGTGGTGGTG
TTGTGGAATGGTGCAAGGTTTGGGGAAAGGGGCGGTGGGTGAATTGGGTGGTGTGAGGAGGGTGAGTGGGTGCAGTGACTGAGCGGTGGATGTTGGTGGTGTGCGGTGTTGCAGGGGAGG
TGCCACAAGGACCGGTCCGGATTTGAGGGAGCATGGACGCCGAACCCCCTTAGATTCGACAACTCGTACTTCCACAGTGAGTGATGTGTGAATTGATGCAGGCCGGTGGGTGGGTTATGA
AGGCGATGCGAGTGGGTGAGATGGAGTTATCGTTGAGGATGTGGGCTAATGATTGTGATGGACATGGTCGTGGGTAGGGTGCTGTTGGAGGGAGAGAAGGATGGACTGATCATGCTGCCA
TCCGACAAGGCTCTGCTGGATGAGCCGAAGACTCGTGAGTTGGTTGAGTTGTACGCGAAGAGGTATGTGCCGTGTTTTGTTTGGTGGTGACGTGGTTGTGTCGGAAAAAATCAGAATAGC
ATAGGGCCCATCGCCTTAAGGTAGTCTGTGTTAAGTGTAGAACGGATTGAGAGGGTGGTGTCCGGGTGCCATTGGTGAAGGTTGGTGGCGGTGATGATGTATTGAGTGGTGCTTGTGGGG
TGTGACAGGACGAGGACAAGTTTTTCGAAGACTACGCCGAGTCTCACATGAAGTTGTCAGAGCTAGGGGGTGAGTTCGCTGGTGTTGACAAGCCTCGCGTGCTTCTTTCTTACTTGAATA
TGTTTCTGGGTTCTTTCTTGTTTTTGGTCTGCAATTGACTTTCTGCTGTGTATTAATTTGATGTGGCTTGGTTCTAGATTTGCCGAGGCGTGA

Retrieve as FASTA

CDS►
Send to BLAST