Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
330 (306) |
PWM (Da): |
36000.47 (33275.1) |
|
PI (pH): |
6.97 (6.65) |
Peptide Signal: |
cut: 25 range:25-330 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MRSFTNLNPCYVLLPFFLVLATNATHTNNFLPRPRTGYYGSACWN VESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLLAGPNSERTAIPNLSLRGFNVIEEAKTQLEIACP RTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRISLASNVILPGPTDSVAVQKLRFAEKNLNTQDLVVLAAGHTIGTAGCIVFRDRFFNYDNTGSPDPTIAPSFVPLIQAQCPLNGDP ATRVVLDTGSGDQFDTSYLNNLKNGRGLLESDQVLWTNLETRPIVERLLGLRFPFLIFGLEFARSMTKMSQIEIKTGLDGEIRRVCSAVN |
Retrieve as FASTA
|
|
Remarks |
Complete sequenc efrom genomic (introns 2 and 3), 5 cDNA and 3 ESTs |
Promoter►
Send to BLAST
Send to cis Analysis
|
|
Terminator +►
Send to BLAST
Send to cis Analysis
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TTAATATAAG ATTAATTAAC CATTACAATA TGATATAAAG TAATGAATAA AAATGGAGAT TATATAGACT CTCCAGCTTT TAATAATAAA CCAGCTAGTT TAACATTTTC TTTTAATGTG
ACTAAGAGGT TTAATTACGA CGATGTGAGT GTGAGGGAAT ACGTGTTTAA ATCACACATA AGAAAAAAGA AATCCTATGT AATTGTAATC TCTTAAGAAA ATTTAAAATA AGCTATATAT
GTGTAATACT GAAATTCTCC TACTTTAGAA TATTTTATGG CTGTTAATTA TGAAAAAAAA AATTGGACTA TAAACAGAAA CAATTAATTA ATGGATATAT CAAAAAAAAA AAACGCAAAC
GTAAAATAGA ATAACATTTA GGTCAATAAA ATTAACCAAT TGAGTTAATA ATATATATAA CGTCTAAATA TGTACATTAG TTTCCAACTC GAGGCAATGA AAGTTTTTTT TTTTTTAATT
CAATAAAGGA TGTAATGAAA ATAAGGATGA TTGGTTTTCA AGATGAAGTT AAATTTCATA AAATAGTATA TTTGGTATCA CGAGATTTTC GCCAATTTCC GGCAGAAAAC TGGGTGATGA
ATATTAGTCT CATCTCATAT TGTATAATGT ACATGTACGT GCTCGGTGAT GGGTGAAATT TGTCCTCTCC GTCTCTGGTT TTTATAACTA GACCGATATT AATTAAAATT ATGTGTCCTG
TATAAAGTTA TCGTTCTTAA TTATACTTGA AATGTGAATA TTGGTTCCTT TCTTTATCTT AATCTATAAC TCTTAACTGT AAAGTGAAAT TTGAATAAGA CTTTTACAAA AAACATAAAA
TACAATTAGT GAAGTCAATC AAAGTTGGAA CGATTCAGTT TGAATTCACT GTTCGAAATG AATCTAATCA TTGGTGGAAA ATGATTAAAG GGATAATAGT AAGGATAATT ATATATCAGT
GGTTGACTTT GACAATAAAG AAAAAGACAA GTCAATGATA
|
Retrieve as FASTA
|
|
DNA ►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAGAAGTTTTACTAATTTAAATCCTTGCTACGTTCTCTTACCGTTCTTCCTTGTCCTAGCCACGAATGCAACACATACAAACAATTTCCTCCCAAGGCCACGGACTGGGTATTACGGT AGTGCATGCTGGAATGTAGAATCGATAGTTCGGTCCGTGGTTGAGTCTAACTATCTTGCTAATCCAGCCAATGCTCCAGGCATTTTGCGTATGCACTTTCACGATTGTTTCGTTCAAGGC TGTGACGCCTCCGTTCTCCTAGCCGGACCTAACTCTGAGCGAACGGCGATTCCAAATCTATCGTTGAGAGGGTTTAATGTCATTGAAGAAGCTAAGACTCAGCTTGAGATCGCTTGTCCT CGAACAGTCTCTTGTGCTGATATCCTCGCACTCGCTGCACGTGACTTCGTCCATTTGGTATAACTTACTTTTCTAATTTTACTTAATTATATACATAAGTCTATCGTGCGTCTTGGGTTT TAACGTCACATGCATATATGTCTATCTATTGACAACGTGATTAAATGAAAGTTTTATACGTATGCATATAGGCGCCGGTGGACCATGGTGGCCAGTTCCATTGGGGAGACTCGATGGCCG AATTTCTCTAGCCTCGAATGTCATTTTGCCGGGACCTACCGACTCCGTTGCCGTGCAGAAGCTGAGGTTTGCCGAAAAAAATCTTAATACCCAAGATCTCGTTGTCCTTGCTGGTACGTA GTGATTTTATAAGGCCTCGATCGCTTGTGTTAAAACATTGTTTTTTCGATTATGTTTGCATGTGAAAATTCTACCTTTTTTATATATTTCTGCAAACGTAAAGTCGTAAACAAAGAATCA AAGCTAGCTTAACATTCAAAGGAGATAATAAATACTTTCTGTATGTTACAAATTACATATTTTGAAATTGTCATGAAGACACCTGGCTAATTCACATAGAGGGCTTGGTATATAACAGCT
CTGGACATACGATAGGAACGGCCGGATGTATTGTGTTTAGGGACAGATTCTTCAACTACGACAACACAGGAAGTCCGGACCCAACCATCGCCCCGAGTTTTGTCCCTCTGATCCAAGCTC AATGCCCTCTGAATGGTGACCCCGCGACTCGTGTAGTGCTGGACACGGGAAGTGGTGACCAATTTGATACGTCGTACCTTAACAACTTGAAGAACGGTCGAGGTCTCCTCGAGTCTGATC AGGTCCTATGGACTAATCTCGAGACCCGACCCATCGTGGAAAGGCTTCTAGGACTACGGTTTCCGTTTCTTATTTTCGGACTGGAGTTCGCGAGGTCCATGACCAAGATGAGTCAAATCG AGATCAAGACGGGTTTGGATGGGGAGATTCGTAGGGTTTGTTCTGCGGTTAACTAA |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAGAAGTTTTACTAATTTAAATCCTTGCTACGTTCTCTTACCGTTCTTCCTTGTCCTAGCCACGAATGCAACACATACAAACAATTTCCTCCCAAGGCCACGGACTGGGTATTACGGT AGTGCATGCTGGAATGTAGAATCGATAGTTCGGTCCGTGGTTGAGTCTAACTATCTTGCTAATCCAGCCAATGCTCCAGGCATTTTGCGTATGCACTTTCACGATTGTTTCGTTCAAGGC TGTGACGCCTCCGTTCTCCTAGCCGGACCTAACTCTGAGCGAACGGCGATTCCAAATCTATCGTTGAGAGGGTTTAATGTCATTGAAGAAGCTAAGACTCAGCTTGAGATCGCTTGTCCT CGAACAGTCTCTTGTGCTGATATCCTCGCACTCGCTGCACGTGACTTCGTCCATTTGGCCGGTGGACCATGGTGGCCAGTTCCATTGGGGAGACTCGATGGCCGAATTTCTCTAGCCTCG AATGTCATTTTGCCGGGACCTACCGACTCCGTTGCCGTGCAGAAGCTGAGGTTTGCCGAAAAAAATCTTAATACCCAAGATCTCGTTGTCCTTGCTGCTGGACATACGATAGGAACGGCC GGATGTATTGTGTTTAGGGACAGATTCTTCAACTACGACAACACAGGAAGTCCGGACCCAACCATCGCCCCGAGTTTTGTCCCTCTGATCCAAGCTCAATGCCCTCTGAATGGTGACCCC GCGACTCGTGTAGTGCTGGACACGGGAAGTGGTGACCAATTTGATACGTCGTACCTTAACAACTTGAAGAACGGTCGAGGTCTCCTCGAGTCTGATCAGGTCCTATGGACTAATCTCGAG ACCCGACCCATCGTGGAAAGGCTTCTAGGACTACGGTTTCCGTTTCTTATTTTCGGACTGGAGTTCGCGAGGTCCATGACCAAGATGAGTCAAATCGAGATCAAGACGGGTTTGGATGGG GAGATTCGTAGGGTTTGTTCTGCGGTTAACTAA |
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATTAAACGCA ACAAATCAAA AGTAATAATC CAAATTATAT ATACATATAT GCACCATTTG GTTAAAAACT AAGAAGAAAC CAAAATGAGA AGTTTTACTA ATTTAAATCC TTGCTACGTT
CTCTTACCGT TCTTCCTTGT CCTAGCCACG AATGCAACAC ATACAAACAA TTTCCTCCCA AGGCCACGGA CTGGGTATTA CGGTAGTGCA TGCTGGAATG TAGAATCGAT AGTTCGGTCC
GTGGTTGAGT CTAACTATCT TGCTAATCCA GCCAATGCTC CAGGCATTTT GCGTATGCAC TTTCACGATT GTTTCGTTCA AGGCTGTGAC GCCTCCGTTC TCCTAGCCGG ACCTAACTCT
GAGCGAACGG CGATTCCAAA TCTATCGTTG AGAGGGTTTA ATGTCATTGA AGAAGCTAAG ACTCAGCTTG AGATCGCTTG TCCTCGAACA GTCTCTTGTG CTGATATCCT CGCACTCGCT
GCACGTGACT TCGTCCATTT GGCCGGTGGA CCATGGTGGC CAGTTCCATT GGGGAGACTC GATGGCCGAA TTTCTCTAGC CTCGAATGTC ATTTTGCCGG GACCTACCGA CTCCGTTGCC
GTGCAGAAGC TGAGGTTTGC CGAAAAAAAT CTTAATACCC AAGATCTCGT TGTCCTTGCT GCTGGACATA CGATAGGAAC GGCCGGATGT ATTGTGTTTA GGGACAGATT CTTCAACTAC
GACAACACAG GAAGTCCGGA CCCAACCATC GCCCCGAGTT TTGTCCCTCT GATCCAAGCT CAATGCCCTC TGAATGGTGA CCCCGCGACT CGTGTAGTGC TGGACACGGG AAGTGGTGAC
CAATTTGATA CGTCGTACCT TAACAACTTG AAGAACGGTC GAGGTCTCCT CGAGTCTGAT CAGGTCCTAT GGACTAATCT CGAGACCCGA CCCATCGTGG AAAGGCTTCT AGGACTACGG
TTTCCGTTTC TTATTTTCGG ACTGGAGTTC GCGAGGTCCA TGACCAAGAT GAGTCAAATC GAGATCAAGA CGGGTTTGGA TGGGGAGATT CGTAGGGTTT GTTCTGCGGT TAACTAATTA
ATATAAGATT AATTAACCAT TACAATATGA TATAAAGTAA TGAATAAAAA TGGAGATTAT ATAGACTCTC CAGCTTTTAA TAATAAACCA GCTAGTTTAA CATTTTCTTT TAATGTGACT
AAGAGGTTTA ATTACGACGA TGTGAGTGTG AGGGAATACG TGTTTAAATC ACACATAAGA AAAAAGAAAT CCTATGTAAT TGTAATCTCT TAAGAAAATT TAAAATAAGC TATATATGTG
TAATACTGAA ATTCTCCTAC TTTAGAATAT TTTATGGCTT TTTTTTTTTT TTAATTCAAT AAAGGATGTA ATGAAAA
|
Retrieve as FASTA
|
|