1. Browse the Database
  2. View Redoxidase
Entry information : PtrCcP01
Entry ID 2536
Creation 2005-12-20 (Nenad Bakalovic)
Last sequence changes 2005-12-20 (Nenad Bakalovic)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2008-08-28 (Christophe Dunand)
Peroxidase information: PtrCcP01
Name PtrCcP01
Class Cytochrome C peroxidase    [Orthogroup: CcP004]
Taxonomy Eukaryota Bacillariophyta Bacillariophyceae Phaeodactylaceae Phaeodactylum
Organism Phaeodactylum tricornutum    [TaxId: 2850 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtrCcP01
start..stop		 S start..stop
TpsCcP01 438 3.47e-156 1..311 1..307
ShenCcP03 363 5.5e-127 40..309 1..269
HfuCcP02 358 2.42e-125 40..309 1..269
DvirCcP02 354 1.49e-123 40..310 1..270
Literature and cross-references PtrCcP01
Literature Scala,S. et al., Genome properties of the diatom Phaeodactylum tricornutum, Plant Physiol. 129 (3), 993-1002 (2002)
EST ref. GenBank:   CT873859.1 [5' end]  BQ540537.1 [3' end]
Cluster/Prediction ref. UniGene:   Ptc.30
Protein sequence: PtrCcP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   321 (287)
PWM (Da):   %s   35217.46 (31620.6)  
PI (pH):   %s   5.74 (5.45) Peptide Signal:   %s   cut: 35 range:35-321
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MMNTARFTAT RLVAPAALTA GTLLWTASPE PVWAKEAPAD LKKIREAITE VIESDMEKRG DGTSLYGTFI RLSWHASGTY SKADNSGGSN GGRMRFTPEA GWGANAGLKV ARDALEPVKA  KFPGLSYADL YTYAGVVAVE EAGGPIIPFA TGRTDESDGK ASPPDGRLPD ADKGARIATI THVRDIFYRM GFNDQEIVAL LGAHAMGRCH TDRSGYWGPW SNAENTFSNE YYRLLVEERW 
SPKVTHNGKP WTGPDQYEDA SGQLMMLPSD IAMIADPEFK KWVELYAKDE DRFFNDFSKA FAKLLSLGVP FAATKPWYQF W 

Retrieve as FASTA  
Remarks Complete sequence from 25 EST's.