1. Browse the Database
  2. View Redoxidase
Entry information : PtrCcP02
Entry ID 2574
Creation 2008-09-01 (Christophe Dunand)
Last sequence changes 2008-09-01 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2015-08-10 (Christophe Dunand)
Peroxidase information: PtrCcP02
Name PtrCcP02
Class Cytochrome C peroxidase    [Orthogroup: CcP006]
Taxonomy Eukaryota Bacillariophyta Bacillariophyceae Phaeodactylaceae Phaeodactylum
Organism Phaeodactylum tricornutum    [TaxId: 2850 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtrCcP02
start..stop		 S start..stop
BprCcP01 410 1.07e-142 16..398 8..392
GtCcP01 389 1.15e-133 12..386 8..389
IgAPx-CcP01 356 1.16e-122 8..299 8..292
BnaCcP02 339 2.49e-116 16..263 19..267
Literature and cross-references PtrCcP02
Literature Scala,S. et al., Genome properties of the diatom Phaeodactylum tricornutum Plant Physiol. 129 (3), 993-1002 (2002)
DNA ref. JGI genome:   chr_10 (635359..636558)
EST ref. GenBank:   CU723206
Cluster/Prediction ref. UniGene:   Ptc.3071
Protein sequence: PtrCcP02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   399 (97)
PWM (Da):   %s   43485.09 (10493.9)  
PI (pH):   %s   5.09 (4.54) Peptide Signal:   %s   cut: 30 range:30-126
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MANAHYADEF YDNAARAEVS RAIVNKKVNV CPFTVRLAWH ASGTFDQSDA SGGSDGARMR YAPELSDGAN AGLALMQDII KPVKEKFPDM SYADLWTMAG TQAIKLTGGP DIPFNYGRTD  DADNNKCPAN GRLPDATQGA EHLRDVFYRM GFGDKEIVAL SGAHTLGSCH RLRSGFDGPW TTNPLKFDNE YFKNLLEIDW KPREWEGPLQ YQDPSGKLMM LPTDMALIQD EAFLPFVKKY  AEDEQAFFAD FAEAFAALIS KGCPAHCQPN AERQAPQHDS NKEFRDLAMH GSVERMEAAS EGVDVNAKEA HSERTAMHKA AFFGHSNVME YLIGLKGDVN AVDADGDTPL HDAAKFGHDA 
VVEALLKAGA DKTIRNKEGK SATDLAAANG KDAVVKMLA 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 10 , no intron) and 10 ESTs. Difficult to create a consensus sequence for the 3' end.