Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
320 (296) |
PWM (Da): |
34310.18 (31845.9) |
Transmb domain: |
i7-29o |
PI (pH): |
8.42 (8.49) |
Peptide Signal: |
cut: 25 range:25-320 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASSCSSFMI TLALLVLVIG GANATLYTNF YSSSCPKLLD TVKCAVESAI SKETRMGASL LRLFFHDCFV NGCDGSILLD DTSSFTGEKN ARPNKNSARG FDVIDKIKSA VEEVCPGVVS
CADILAIAAR DSVHILGGPS WNVKLGRRDS RTASQSAANN GIPPPTSNVN QLISRFNSLG LSPKDLVALS GAHTIGQARC TTFRARIYNE TNIDSSFAHI RQSTCPPNSG SGDNNLAPLD
LATPTFFDNH YFKNLIQKKG LLHSDQQLFN GASTDSLVRT YNTNPGSFFA DFSAAMIKMG DISPLTGSLG EIRNKCRRVN *
|
Retrieve as FASTA
|
|
Remarks |
Complete sequence from genomic. Cultivar="Moncalm". No EST found. |
Promoter►
Send to BLAST
Send to cis Analysis
|
|
DNA ►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCGT CTTGTTCTAG CTTTATGATC ACTTTGGCCC TTTTGGTCCT TGTGATTGGA GGTGCCAATG CAACACTTTA CACAAACTTC TACTCCAGTT CTTGCCCAAA ACTCCTTGAC
ACTGTGAAAT GCGCAGTGGA ATCAGCCATA TCAAAGGAGA CCCGCATGGG TGCTTCTCTC CTACGTTTGT TCTTCCACGA TTGCTTTGTT AACGTAATTT TTAACACCTG CTAGTTAACT
ATTCTATTTA CTGCTAGACA ATTTTGTTTC TGCATTCGTT TTCAAGTTAT TAGGTTTGGT TGGTTTTGCT TAAAAAGCAT TTTTTATAGC TAGTTTTTGC AACTACATTT CATAGAACTA
TTATAGCAAA ACTACTAAAG TAACCCCGTA TATTTTCTGT CAGTTCAGAT ATCAATAGTT ATGATCAATA TAATTTTTGT CCATGCATAT TTTTGCATTT CTAACTGGTT GACTGTGTAA
AAAAACTGAA ACTAGCAATA TATATAAGTT TTAAACAGTA TATGTGGATT GAATAAATAA GAAGTGGTGC AGGGGTGTGA TGGGTCGATT CTACTTGATG ATACATCAAG CTTCACCGGA
GAGAAGAACG CACGTCCTAA CAAGAACTCT GCTCGTGGAT TTGATGTGAT CGACAAAATC AAGTCAGCTG TGGAGGAAGT GTGCCCAGGT GTGGTCTCCT GTGCTGATAT CCTTGCCATT
GCTGCCAGAG ATTCTGTTCA CATCGTAAGC AATTACTATA TATAAGGCCC GTCATATAAT ATTTTACATA GTATTGACCC ACATGACATG CAAGTAGAAG TGAATTGAAT ATTTGATTGG
ATTTAATCTC AGCTTGGTGG TCCAAGTTGG AACGTGAAAC TTGGAAGAAG AGATTCGAGG ACAGCAAGCC AATCTGCTGC CAACAATGGC ATCCCACCAC CCACTTCAAA CGTCAACCAA
CTCATCTCCA GATTCAACTC TCTTGGACTT TCTCCCAAGG ACTTGGTCGC ACTATCTGGT ACACACAATA ACCTGGATTC AAAATACACT TTTTAGAAAC TGTTTATAAC TTTTGACCTT
GTTCCAGGGG CTCATACAAT TGGACAAGCA AGGTGCACAA CCTTTAGAGC TCGCATCTAC AATGAAACCA ACATAGATAG TTCCTTTGCA CACATCAGAC AATCTACATG CCCTCCAAAC
TCAGGATCAG GGGACAACAA CTTGGCACCC CTTGACCTTG CCACTCCCAC TTTCTTTGAC AATCACTACT TCAAGAATCT CATTCAGAAG AAGGGCCTCC TCCATTCTGA TCAACAACTC
TTCAATGGTG CTTCCACTGA CTCACTGGTA CGTACCTACA ACACCAACCC AGGCTCCTTT TTCGCTGATT TCTCCGCTGC TATGATAAAA ATGGGAGACA TCAGTCCCCT CACCGGCTCC
CTCGGAGAAA TAAGGAACAA GTGTCGGAGG GTCAACTAA
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCGT CTTGTTCTAG CTTTATGATC ACTTTGGCCC TTTTGGTCCT TGTGATTGGA GGTGCCAATG CAACACTTTA CACAAACTTC TACTCCAGTT CTTGCCCAAA ACTCCTTGAC
ACTGTGAAAT GCGCAGTGGA ATCAGCCATA TCAAAGGAGA CCCGCATGGG TGCTTCTCTC CTACGTTTGT TCTTCCACGA TTGCTTTGTT AACGGGTGTG ATGGGTCGAT TCTACTTGAT
GATACATCAA GCTTCACCGG AGAGAAGAAC GCACGTCCTA ACAAGAACTC TGCTCGTGGA TTTGATGTGA TCGACAAAAT CAAGTCAGCT GTGGAGGAAG TGTGCCCAGG TGTGGTCTCC
TGTGCTGATA TCCTTGCCAT TGCTGCCAGA GATTCTGTTC ACATCCTTGG TGGTCCAAGT TGGAACGTGA AACTTGGAAG AAGAGATTCG AGGACAGCAA GCCAATCTGC TGCCAACAAT
GGCATCCCAC CACCCACTTC AAACGTCAAC CAACTCATCT CCAGATTCAA CTCTCTTGGA CTTTCTCCCA AGGACTTGGT CGCACTATCT GGGGCTCATA CAATTGGACA AGCAAGGTGC
ACAACCTTTA GAGCTCGCAT CTACAATGAA ACCAACATAG ATAGTTCCTT TGCACACATC AGACAATCTA CATGCCCTCC AAACTCAGGA TCAGGGGACA ACAACTTGGC ACCCCTTGAC
CTTGCCACTC CCACTTTCTT TGACAATCAC TACTTCAAGA ATCTCATTCA GAAGAAGGGC CTCCTCCATT CTGATCAACA ACTCTTCAAT GGTGCTTCCA CTGACTCACT GGTACGTACC
TACAACACCA ACCCAGGCTC CTTTTTCGCT GATTTCTCCG CTGCTATGAT AAAAATGGGA GACATCAGTC CCCTCACCGG CTCCCTCGGA GAAATAAGGA ACAAGTGTCG GAGGGTCAAC
TAA
|
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CCTAAATATT ACTTACTCTT CTAGAATTCT CAGACATATG GCTTCGTCTT GTTCTAGCTT TATGATCACT TTGGCCCTTT TGGTCCTTGT GATTGGAGGT GCCAATGCAA CACTTTACAC
AAACTTCTAC TCCAGTTCTT GCCCAAAACT CCTTGACACT GTGAAATGCG CAGTGGAATC AGCCATATCA AAGGAGACCC GCATGGGTGC TTCTCTCCTA CGTTTGTTCT TCCACGATTG
CTTTGTTAAC GGGTGTGATG GGTCGATTCT ACTTGATGAT ACATCAAGCT TCACCGGAGA GAAGAACGCA CGTCCTAACA AGAACTCTGC TCGTGGATTT GATGTGATCG ACAAAATCAA
GTCAGCTGTG GAGGAAGTGT GCCCAGGTGT GGTCTCCTGT GCTGATATCC TTGCCATTGC TGCCAGAGAT TCTGTTCACA TCCTTGGTGG TCCAAGTTGG AACGTGAAAC TTGGAAGAAG
AGATTCGAGG ACAGCAAGCC AATCTGCTGC CAACAATGGC ATCCCACCAC CCACTTCAAA CGTCAACCAA CTCATCTCCA GATTCAACTC TCTTGGACTT TCTCCCAAGG ACTTGGTCGC
ACTATCTGGG GCTCATACAA TTGGACAAGC AAGGTGCACA ACCTTTAGAG CTCGCATCTA CAATGAAACC AACATAGATA GTTCCTTTGC ACACATCAGA CAATCTACAT GCCCTCCAAA
CTCAGGATCA GGGGACAACA ACTTGGCACC CCTTGACCTT GCCACTCCCA CTTTCTTTGA CAATCACTAC TTCAAGAATC TCATTCAGAA GAAGGGCCTC CTCCATTCTG ATCAACAACT
CTTCAATGGT GCTTCCACTG ACTCACTGGT ACGTACCTAC AACACCAACC CAGGCTCCTT TTTCGCTGAT TTCTCCGCTG CTATGATAAA AATGGGAGAC ATCAGTCCCC TCACCGGCTC
CCTCGGAGAA ATAAGGAACA AGTGTCGGAG GGTCAACTAA TTCCATTGTT GAAAACACCT ACGTCTTTTG GATTTTATGA TTCCAGATGA ATGCAGGGGT AATAATAAGT TGTTAAGTAT
CTCCTCATCT CATTTTTACG TTTTCTGCTA CAAAGTGTAC CTGCATTTCC CTTTTTCCTT AATTTTGCTT CCGAGTGCTT ATGTTCAAGT TGAAGGCTTT TCATGTACAA CTTCCTTCCT
CACTTCCTAC TACAGTTTTA CTTATCATTA TTTTGGCTTT TCTTTTTTGC TTTTTATGTC CACTTTCTAC
|
Retrieve as FASTA
|
|