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Entry information : SbPrx133 (Sobic.010G149700.1 [2.1] / SB10G020100 [1.4])
Entry ID 2721
Creation 2006-01-13 (Christophe Dunand)
Last sequence changes 2006-01-13 (Christophe Dunand)
Sequence status complete
Reviewer Messaoudi
Last annotation changes 2014-08-04 (Messaoudi)
Peroxidase information: SbPrx133 (Sobic.010G149700.1 [2.1] / SB10G020100 [1.4])
Name (synonym) SbPrx133 (Sobic.010G149700.1 [2.1] / SB10G020100 [1.4])
Class Class III peroxidase    [Orthogroup: Prx092]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Sorghum
Organism Sorghum bicolor    [TaxId: 4558 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SbPrx133
start..stop		 S start..stop
ZmPrx117 550 0 1..328 1..323
SiPrx40 492 6.08e-177 1..329 1..327
SiPrx28 460 2.71e-164 1..329 1..330
SiPrx41 456 1.28e-162 1..329 1..331
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '2721' 'complement(join(43071337..43072098,43072197..43072424))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 43072197..43072424 226 N° 2 43071337..43072098 760  
complement(join(43071337..43072098,43072197..43072424))


exon

Literature and cross-references SbPrx133 (Sobic.010G149700.1 [2.1] / SB10G020100 [1.4])
Literature Plant Genome Database
DNA ref. Phytozome 12:   chromosome_10 (43072424..43071337)
Protein sequence: SbPrx133 (Sobic.010G149700.1 [2.1] / SB10G020100 [1.4])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (301)
PWM (Da):   %s   35229.26 (32302.7) Transmb domain:   %s   i7-26o
PI (pH):   %s   6.34 (6.17) Peptide Signal:   %s   cut: 29 range:29-329
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSPSTRSCSWLVLVPLILSILLACTANGDHLKVGYYDNTCPNVQQ
IVHSVMASRVDADQSMAPAVLRLFFHDCFVDGCDGSVLLDGTPFSGSEKDAKPNANSLRGFDVIDEIKSHVEHACPATVSCADILALASRDAVALLGGPTWEVQLGRRDSRGANRTAAEYGLPAPNSTLAELIGLFRHHGLDARDMAALSG
AHTIGTARCHHYRNRAYGYGGEGGAAAIDPAFAERRRQTCQSAYDAPAPFDEQTPMGFDNAYYRDLVARRGLLTSDQALYGGGGPLDNLVEMYSTDGKAFAKDFARAMVKMGKIPPPPQM
QVEVRLSCSNINW*

Retrieve as FASTA  
Remarks Complete sequence from only genomic (chromo 10, intron 1). No EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCGCCTTCCACCAGGAGCTGTTCATGGCTTGTTCTTGTTCCCCTGATCCTCTCGATTCTTCTCGCGTGCACTGCCAACGGCGACCATCTAAAGGTGGGCTACTACGACAATACGTGC
CCCAACGTGCAGCAGATCGTGCACTCCGTGATGGCGTCCAGGGTCGACGCCGACCAGTCGATGGCGCCCGCCGTGCTCCGCCTCTTCTTCCACGACTGCTTCGTCGACGTACGTACGCCC
CCAATTTCACCGATCTAATTCCTTCCTAGTCTAATCTTTACTTGTGTTTCTGCATTGTGTCCTAAAGTTTTTTTTTTGTACGGCAGGGGGGTGCGACGGCTCCGTCCTACTGGACGGGAC
GCCCTTCTCCGGGAGCGAGAAGGACGCCAAGCCCAACGCCAACTCGCTCCGGGGCTTCGACGTGATCGACGAGATCAAGTCCCACGTCGAGCATGCCTGCCCGGCCACGGTCTCCTGCGC
CGACATCCTCGCGCTCGCCTCCCGCGACGCCGTCGCGCTGCTCGGGGGCCCGACGTGGGAAGTGCAGCTCGGCCGCAGGGACTCGCGCGGCGCCAACAGGACCGCCGCCGAGTACGGTCT
CCCAGCCCCGAACTCCACCCTCGCCGAGCTCATTGGCCTGTTCAGGCACCACGGCCTCGACGCGCGCGACATGGCGGCGCTCTCCGGCGCGCACACCATCGGCACGGCGCGGTGCCACCA
CTACAGGAACCGAGCCTACGGCTACGGCGGCGAGGGCGGCGCCGCCGCCATCGACCCCGCGTTCGCGGAGCGGCGCAGGCAGACGTGCCAGTCCGCTTATGACGCGCCGGCGCCGTTCGA
CGAGCAGACCCCGATGGGGTTCGACAACGCCTACTACCGGGACCTCGTGGCGCGGCGCGGCCTCCTCACCTCCGACCAGGCGCTCTACGGCGGCGGTGGACCGCTGGACAATCTGGTGGA
AATGTACAGCACGGACGGCAAGGCGTTCGCCAAGGATTTTGCCAGGGCAATGGTGAAGATGGGCAAAATACCACCGCCACCACAGATGCAGGTGGAGGTCAGACTCAGCTGCAGTAACAT
CAACTGGTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCGCCTTCCACCAGGAGCTGTTCATGGCTTGTTCTTGTTCCCCTGATCCTCTCGATTCTTCTCGCGTGCACTGCCAACGGCGACCATCTAAAGGTGGGCTACTACGACAATACGTGC
CCCAACGTGCAGCAGATCGTGCACTCCGTGATGGCGTCCAGGGTCGACGCCGACCAGTCGATGGCGCCCGCCGTGCTCCGCCTCTTCTTCCACGACTGCTTCGTCGACGGGTGCGACGGC
TCCGTCCTACTGGACGGGACGCCCTTCTCCGGGAGCGAGAAGGACGCCAAGCCCAACGCCAACTCGCTCCGGGGCTTCGACGTGATCGACGAGATCAAGTCCCACGTCGAGCATGCCTGC
CCGGCCACGGTCTCCTGCGCCGACATCCTCGCGCTCGCCTCCCGCGACGCCGTCGCGCTGCTCGGGGGCCCGACGTGGGAAGTGCAGCTCGGCCGCAGGGACTCGCGCGGCGCCAACAGG
ACCGCCGCCGAGTACGGTCTCCCAGCCCCGAACTCCACCCTCGCCGAGCTCATTGGCCTGTTCAGGCACCACGGCCTCGACGCGCGCGACATGGCGGCGCTCTCCGGCGCGCACACCATC
GGCACGGCGCGGTGCCACCACTACAGGAACCGAGCCTACGGCTACGGCGGCGAGGGCGGCGCCGCCGCCATCGACCCCGCGTTCGCGGAGCGGCGCAGGCAGACGTGCCAGTCCGCTTAT
GACGCGCCGGCGCCGTTCGACGAGCAGACCCCGATGGGGTTCGACAACGCCTACTACCGGGACCTCGTGGCGCGGCGCGGCCTCCTCACCTCCGACCAGGCGCTCTACGGCGGCGGTGGA
CCGCTGGACAATCTGGTGGAAATGTACAGCACGGACGGCAAGGCGTTCGCCAAGGATTTTGCCAGGGCAATGGTGAAGATGGGCAAAATACCACCGCCACCACAGATGCAGGTGGAGGTC
AGACTCAGCTGCAGTAACATCAACTGGTGA

Retrieve as FASTA