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Entry information : WmAPx01(Welmir_2061067)
Entry ID 2775
Creation 2006-01-19 (Christophe Dunand)
Last sequence changes 2016-01-12 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-10-20 (Christophe Dunand)
Peroxidase information: WmAPx01(Welmir_2061067)
Name WmAPx01(Welmir_2061067)
Class Ascorbate peroxidase     [Orthogroup: APx2003]*
Taxonomy Eukaryota Viridiplantae Streptophyta Welwitschiaceae Welwitschia
Organism Welwitschia mirabilis    [TaxId: 3377 ]
Cellular localisation N/D
Tissue type strobili (cone)
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value WmAPx01
start..stop		 S start..stop
GmonAPx04 501 0 1..291 1..291
GbAPx03 486 4.15e-176 1..290 3..292
CmichAPx09 483 1.36e-174 2..291 3..292
PtaAPx05 478 5.23e-173 1..290 1..290
Literature and cross-references WmAPx01(Welmir_2061067)
Literature dePamphilis,C. et al., Generation of ESTs from early flower buds of Welwitschia mirabilis. Unpublished
EST ref. GenBank:   DT597288.1 [5' end]
Protein sequence: WmAPx01(Welmir_2061067)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   290 (25)
PWM (Da):   %s   31588.21 (2784.3) Transmb domain:   %s   o261-283i
PI (pH):   %s   6.26 (5.45) Peptide Signal:   %s   cut: 22 range:22-46
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAPTVDAAYL KSIEGARREL RALIAEKNCA PIMLRLAWHD AGTYDAKTKT GGANGSIRNE DEYSHGSNRG LKIAIDLLEP IKAKFPNITY ADLYQLAGVV AVEITGGPMI DFVPGRKDSL  ASPKEGRLPD ASKGAQHLRD IFYRMGLSDK DIVALSGGHT LGRAHQERSG FEGAWTKQPL KFDNSYFVEL LKGESEGVLQ LPTDKCLLED PAFRPYVELY AKDEDAFFRD YAESHKKLSE 
LGFRDPSSVS SGSTSDVSTT TVLVQGAVGV AVAAAVVILS YLYETKRMAK * 

Retrieve as FASTA  
Remarks partial sequence from 1 EST (frame shift and 3' is missing) and RNA seq (Welmir_2061067)
CDS►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTCCGA CCGTTGACGC TGCTTATCTG AAATCAATTG AAGGTGCGCG CAGGGAGCTC CGTGCTCTCA TCGCCGAGAA GAATTGCGCG CCGATTATGC TTCGTCTTGC GTGGCATGAC  GCTGGAACGT ATGATGCAAA GACAAAGACT GGTGGTGCAA ATGGGTCTAT CAGAAACGAG GATGAATACA GTCATGGATC AAATAGGGGC CTAAAGATTG CTATTGACTT GTTGGAACCA  ATCAAGGCAA AATTCCCTAA CATCACCTAT GCGGACCTTT ACCAGCTTGC TGGTGTAGTT GCAGTGGAGA TAACTGGGGG TCCTATGATT GATTTTGTGC CTGGACGTAA GGATTCACTG  GCATCACCGA AAGAGGGGAG GCTTCCGGAT GCCTCTAAAG GTGCACAGCA CCTGAGGGAT ATCTTTTATA GGATGGGTTT ATCTGACAAA GATATCGTTG CTCTTTCTGG AGGACACACA  TTGGGGAGAG CACACCAAGA AAGGTCAGGC TTTGAGGGAG CATGGACTAA GCAGCCACTC AAATTTGATA ACTCATACTT TGTAGAGCTT CTCAAAGGTG AATCTGAAGG TGTGCTTCAG  TTGCCCACAG ACAAATGCTT GCTGGAAGAT CCTGCATTCC GTCCTTATGT GGAGCTTTAT GCAAAGGATG AAGACGCTTT TTTCAGGGAC TATGCAGAGT CACACAAGAA GCTTTCTGAA  TTAGGATTCA GAGATCCAAG TTCTGTGTCA TCTGGATCTA CTTCTGATGT AAGCACCACA ACAGTGCTAG TGCAAGGAGC AGTTGGGGTG GCAGTTGCTG CAGCAGTTGT TATATTGAGT 
TACTTATATG AGACCAAGAG AATGGCAAAG TGA 

Retrieve as FASTA