1. Browse the Database
  2. View Redoxidase
Entry information : BnPrx37_other
Entry ID 2829
Creation 2009-08-06 (Christophe Dunand)
Last sequence changes 2009-08-06 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2009-08-06 (Christophe Dunand)
Peroxidase information: BnPrx37_other
Name BnPrx37_other
Class Class III peroxidase     [Orthogroup: Prx018]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica napus (oilseed rape)    [TaxId: 3708 ]
Cellular localisation N/D
Tissue type Leaves
Inducer Pathogen interaction
Repressor N/D
Best BLASTp hits
Perox score E-value BnPrx37_other
start..stop		 S start..stop
BrPrx37-1Aa_other 527 0 1..265 1..265
CrubPrx47 477 7.29e-172 11..265 2..258
AhalPrx37 477 7.72e-172 12..265 3..258
BstrPrx36 474 9.23e-171 12..265 3..257
Literature and cross-references BnPrx37_other
Literature Sexton,A., Cozijnsen,A., Keniry,A., Jewell,E., Love,C., Batley,J., Edwards,D. and Howlett,B. Transcription profile of genes from three developmental stages of the plant pathogen Sclerotinia sclerotiorum Unpublished
DNA ref. GenBank:   FP021933.1 [5' end]
EST ref. GenBank:   DV643266.1 [Fragment]
Cluster/Prediction ref. UniGene:   Bna.9089
Protein sequence: BnPrx37_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   265 (236)
PWM (Da):   %s   28955.7 (25853.1) Transmb domain:   %s   o330-352i463-485o513-535i699-716o
PI (pH):   %s   9.07 (8.87) Peptide Signal:   %s   cut: 30 range:30-265
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MRSSSSSSFD STTLIKLGFL LIHVSLSHAQ LSPSFYDKTC PQVFDIATNT IVNALRTDPR IAASILRLHF HDCFVNGCDA SILLDNTTSF RTEKDAFGNA NSARGFDVID RMKAAVEKAC  PKTVSCADLL AIAAQKSVVL AGGPSWKVAG GRRDSLKGFM DLANKNLPAP NFTLKQLKDS FKNVGLDRPS DLVALSGGHT FGKNQCRFIM DRLYNFSESG SPDPTLDKSY LSTLRKQCPR 
NGNQSILVDF DLRTPTVFDN KYYVN 

Retrieve as FASTA  
Remarks Partial sequence from 4 EST and 1 GSS. 3' end is missing. Sclerotinia sclerotiorum infection.