Entry information : PtAPx01 (POPTR_0006s13440 / Potri.006G132200)
| Entry ID | 2872 |
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| Creation | 2006-04-04 (Felipe Teixeira) |
| Last sequence changes | 2010-08-02 (Christophe Dunand) |
| Sequence status | complete |
| Reviewer | Qiang Li |
| Last annotation changes | 2012-03-07 (Qiang Li) |
Peroxidase information: PtAPx01 (POPTR_0006s13440 / Potri.006G132200)
| Name (synonym) | PtAPx01 (POPTR_0006s13440 / Potri.006G132200) | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Class | Ascorbate peroxidase [Orthogroup: APx2001] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Taxonomy | Eukaryota Viridiplantae Streptophyta Salicaceae Populus | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Organism | Populus trichocarpa (Western balsam poplar) [TaxId: 3694 ] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Cellular localisation | Cytosolic |
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| Tissue type | Stems |
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| Inducer | N/D |
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| Repressor | N/D |
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| Best BLASTp hits |
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| Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '2872' 'complement(join(10848585..10848600,10848716..10848774,10848920..10849022,10849225..10849304,10849394..10849476,10849565..10849613,10850932..10850997,10851109..10851283,10851418..10851536))' |
Exons►
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Literature and cross-references PtAPx01 (POPTR_0006s13440 / Potri.006G132200)
| Literature | Ralph,S., et al., Genomics of hybrid poplar (Populus trichocarpax deltoides) interacting with forest tent caterpillars (Malacosoma disstria): normalized and full-length cDNA libraries, expressed sequence tags, and a cDNA microarray for the study of insect-induced defences Mol. Ecol. 15 (5), 1275-1297 (2006). |
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| DNA ref. | Phytozome 12: Chr06 (10851536..10848585) |
| EST ref. | GenBank: DT495423.1 [5' end] CV232507.1 [3' end] UniGene: Pth.17238 |
| Cluster/Prediction ref. | JGI gene: 675956 |
| Omic ref. | ePlant: Potri.006G132200 |
Protein sequence: PtAPx01 (POPTR_0006s13440 / Potri.006G132200)
| Sequence Properties first value : protein second value (mature protein) |
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| Sequence Send to BLAST Send to Peroxiscan |
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| Remarks | Complete sequence from genomic (8 introns) and 2 ESTs. Very short last exon (YADS) not found with Scipio. Cultivar="VT-125". |
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| DNA ► Send to BLAST |
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| CDS► Send to BLAST |
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