Entry information : PtAPx07 (POPTR_0005s20140 / Potri.005G179200)
| Entry ID | 2878 |
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| Creation | 2010-04-09 (Christophe Dunand) |
| Last sequence changes | 2010-04-09 (Christophe Dunand) |
| Sequence status | complete |
| Reviewer | Qiang Li |
| Last annotation changes | 2012-03-07 (Qiang Li) |
Peroxidase information: PtAPx07 (POPTR_0005s20140 / Potri.005G179200)
| Name (synonym) | PtAPx07 (POPTR_0005s20140 / Potri.005G179200) | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Class | Ascorbate peroxidase [Orthogroup: APx2002] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Taxonomy | Eukaryota Viridiplantae Streptophyta Salicaceae Populus | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Organism | Populus trichocarpa (Western balsam poplar) [TaxId: 3694 ] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Cellular localisation | Chloroplastic |
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| Tissue type | N/D |
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| Inducer | N/D |
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| Repressor | N/D |
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| Best BLASTp hits |
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| Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '2878' 'complement(join(19539062..19539214,19539523..19539585,19540055..19540159,19540245..19540322,19540429..19540503,19541320..19541406,19541490..19541557,19541666..19541753,19541840..19541940,19542024..19542144,19542311..19542421,19542503..19542727))' |
Exons►
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Literature and cross-references PtAPx07 (POPTR_0005s20140 / Potri.005G179200)
| Literature | JGI |
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| DNA ref. | Phytozome 12: Chr05 (19542727..19539062) |
| Cluster/Prediction ref. | JGI gene: 559250 [Incorrect prediction] |
| Omic ref. | ePlant: Potri.005G179200 |
Protein sequence: PtAPx07 (POPTR_0005s20140 / Potri.005G179200)
| Sequence Properties first value : protein second value (mature protein) |
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| Sequence Send to BLAST Send to Peroxiscan |
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| Remarks | Complete sequence from genomic (11 introns). Incorrect prediction from JGI (very small last exon: 1 aa; or alternative splicing which could be confirmed by ESTs from populus hybrids: CV278216.1, CV256725.1, BP930644.1). No EST. | ||||||||||||
| DNA ► Send to BLAST |
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| CDS► Send to BLAST |
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