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Entry information : BoPrx47-1Ca_other
Entry ID 3001
Creation 2006-09-01 (Christophe Dunand)
Last sequence changes 2006-09-01 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2012-05-10 (Christophe Dunand)
Peroxidase information: BoPrx47-1Ca_other
Name BoPrx47-1Ca_other
Class Class III peroxidase     [Orthogroup: Prx028]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type Etiolated seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx47-1Ca_other
start..stop		 S start..stop
BrPrx47-1Aa_other 550 0 1..271 44..314
AtPrx47 496 8.24e-180 1..271 55..325
CrubPrx54 495 1.74e-179 1..271 55..325
AlyPrx47 495 2.55e-179 1..271 55..325
Literature and cross-references BoPrx47-1Ca_other
Literature Barker,G.C., Sharp,A., Durkin,J., Naylor,R., Edwards,R., Gjetvaj,B., Lydiate,D. and King,G. Analyis of EST libraries of Brassica oleracea prepared from differing stages of development, Unpublished (2005)
DNA ref. GenBank:   BZ451134 [3' end]
EST ref. GenBank:   AM062148 [3' end]
Protein sequence: BoPrx47-1Ca_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   271 (321)
PWM (Da):   %s   29336.21 (35782.9)  
PI (pH):   %s   5.36 (6.51) Peptide Signal:   %s   cut: 30 range:30-350
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
NSxDNALRAD PTLAAGLIRM LFHDCFIEGC DASILLDSTK DNTAEKDSPA NLSLRGYEII DDAKAEIENT CPGVVSCADI IAMAARDAVF WAGGPYYQIA NGRFDGKRSK IEDTRNLPSP  FLNASQLIQT FGQRGFSVRD VVALSGAHTL GVARCSSFKD RLTTPDSTMD SSFAKTLSKT CSAGDNTEQP FDxxRNDFDN AYFNALQRKS GVLFSDQTLF NSPMTRNLVN GYAFNQAMFF 
FHFQQAMQKM SDLNVKPGSQ GEVRQNCRSL N 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST and 1 GSS (BZ451134). PS is missing. Variety="alboglabra".