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Entry information : BoPrx30_other
Entry ID 3003
Creation 2006-05-04 (Christophe Dunand)
Last sequence changes 2006-05-04 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2008-04-02 (Christophe Dunand)
Peroxidase information: BoPrx30_other
Name BoPrx30_other
Class Class III peroxidase     [Orthogroup: Prx003]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type Etiolated seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx30_other
start..stop		 S start..stop
BrPrx30-1Ab_other 605 0 1..293 34..326
TsPrx30 577 0 1..293 36..328
CrubPrx66 576 0 1..293 34..326
CagraPrx41 572 0 1..293 34..326
Literature and cross-references BoPrx30_other
Literature Barker,G.C., Sharp,A., Durkin,J., Naylor,R., Edwards,R., Gjetvaj,B., Lydiate,D. and King,G. Analyis of EST libraries of Brassica oleracea prepared from differing stages of development, Unpublished (2005)
DNA ref. GenBank:   BH421366
mRNA ref. GenBank:   AM057964
Protein sequence: BoPrx30_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   293
PWM (Da):   %s   31733.18 Transmb domain:   %s   i7-25o
PI (pH):   %s   9.3
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
SCPKAEKIIS DHIEKHIHNG PSLAAPLIRM HFHDCFVRGC DGSVLINSTS GNAEKDAPPN LTLRGFGFVE RIKTILEAEC PRTVSCADII ALTARDAVVA TGGPWWSVPT GRRDGRISNL  TEGSNNIPPP TSNFTTLQRL FANQGLNLKD LVLLSGAHTI GVSHCSSMNT RLYNFSTTVK QDPALDSEYA ANLKANKCKS LNDNTTILEM DPGSRKSFDL SYYRLVLKRR GLFQSDSALT 
TNSATLKMIN DLVNGSEEKF YKAFAKSMEK MGRVKVKTGS AGVIRTVCSV AGS 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST and 3 GSS (BH421366, BH580187, BZ030445 ). Short PS is missing. cultivar="A12DHd", variety="alboglabra".