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Entry information : BoPrx69-1Ca_other
Entry ID 3011
Creation 2009-08-10 (Christophe Dunand)
Last sequence changes 2009-08-10 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-05-10 (Christophe Dunand)
Peroxidase information: BoPrx69-1Ca_other
Name BoPrx69-1Ca_other
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type Etiolated seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx69-1Ca_other
start..stop		 S start..stop
BrPrx70-1Ab_other 384 1.32e-136 1..199 1..199
ThPrx69 358 3.51e-126 1..199 1..199
TsPrx69 358 3.63e-126 1..199 1..199
CagraPrx72 323 1.26e-112 1..199 1..199
Literature and cross-references BoPrx69-1Ca_other
Literature Barker,G.C., Sharp,A., Durkin,J., Naylor,R., Edwards,R., Gjetvaj,B., Lydiate,D. and King,G. Analyis of EST libraries of Brassica oleracea prepared from differing stages of development, Unpublished (2005)
DNA ref. GenBank:   CC946052.1 [5' end]  CC946058.1 [Fragment]
EST ref. GenBank:   AM057900.1 [5' end]
Protein sequence: BoPrx69-1Ca_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   199 (176)
PWM (Da):   %s   21124.03 (18691.6) Transmb domain:   %s   i7-24o
PI (pH):   %s   9.46 (9.12) Peptide Signal:   %s   cut: 24 range:24-199
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGRGYNLLFI LVTFLVLVAA VAAQGNSGSN RGVGQRPRVG FYGNRCRNVE SIVTSVVRKH VQSNPANAPG ILRMHFHDCF VRGCDGSVLI AGNNTERTAG PNRSLRGFEA IEEAKTRLEA 
ECPGIVSCAD ILTLAARDAV VLTGGQGWRV PLGRLDGRIS QASDVILPGP FDAVDKQKRD FAAKTLNTID LVTLVGGHT 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST and 4 GSS (CC946052, BH949192, CC946058) , (no intron 1, intron 2 and 3 present). Small 3' end is missing. var. alboglabra