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Entry information : BoPrx64-1Ca_other
Entry ID 3012
Creation 2009-08-12 (Christophe Dunand)
Last sequence changes 2009-08-12 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-05-10 (Christophe Dunand)
Peroxidase information: BoPrx64-1Ca_other
Name BoPrx64-1Ca_other
Class Class III peroxidase     [Orthogroup: Prx016]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue types Etiolated seedlings
Leaves
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx64-1Ca_other
start..stop		 S start..stop
BrPrx64_other 615 0 1..296 22..317
TsPrx64-1 583 0 1..296 22..317
BstrPrx12 576 0 1..296 22..317
CrubPrx43 573 0 1..296 22..317
Literature and cross-references BoPrx64-1Ca_other
Literature Barker,G.C., Sharp,A., Durkin,J., Naylor,R., Edwards,R., Gjetvaj,B. , Lydiate,D. and King,G. Analyis of EST libraries of Brassica oleracea prepared from
differing stages of development, Unpublished (2005)
DNA ref. GenBank:   BH985052 [3' end]
EST ref. GenBank:   EH419133.1 [3' end]
Cluster/Prediction ref. UniGene:   Bol.1593
Protein sequence: BoPrx64-1Ca_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   296
PWM (Da):   %s   32014.01 Transmb domain:   %s   i21-43o
PI (pH):   %s   9.24
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ALSPHYYDHS CPQADQIVTN AVKKAMSNDK TVPAALLRMH FHDCFVRGCD ASVLLDSKGK NKAEKDGPPN ISLHAFYVID NAKKALEEQC PGVVSCADIV SLAARDAVAL SGGPTWEVPN  GRKDGRVSKA IETRQLPAPT FNISQLQQSF GQRGLSMHDL VVLSGGHTLG FAHCSSFQNR INNFSTQKQV DPTLNPSFAA SLKGICPAHN KAKNAGATMD ASTTSFDNIY YKMLMQGKSL 
FSSDQALLTT PSTKKLVAKY ATSMEEYERA FVKSMIKMSS ISGNGNEVRL NCRRVR 

Retrieve as FASTA  
Remarks Partial sequence from 3 ESTs and 1 GSS (intron 3 is present). Cultivar="A12DHd", variety="alboglabra". Short 5'end is missing.