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Entry information : BoPrx45-1Cb_other
Entry ID 3014
Creation 2006-09-01 (Christophe Dunand)
Last sequence changes 2006-09-01 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2012-05-10 (Christophe Dunand)
Peroxidase information: BoPrx45-1Cb_other
Name BoPrx45-1Cb_other
Class Class III peroxidase     [Orthogroup: Prx020]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx45-1Cb_other
start..stop		 S start..stop
BnPrx45-1_other 519 0 1..255 73..325
BrPrx45-1Aa_other 517 0 1..255 73..325
TsPrx45 488 7.28e-177 1..255 75..327
BrPrx45-1Ab_other 486 4.78e-176 1..255 72..324
Literature and cross-references BoPrx45-1Cb_other
Literature Ayele,M., Haas,B.J., Kumar,N., Wu,H., Xiao,Y., Van Aken,S., Utterback,T.R., Wortman,J.R., White,O.R. and Town,C.D. Whole genome shotgun sequencing of Brassica oleracea and its application to gene discovery and annotation in Arabidopsis, Genome Res. 15 (4), 487-495 (2005).
DNA ref. GenBank:   BH727983.1
Protein sequence: BoPrx45-1Cb_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   255 (295)
PWM (Da):   %s   27844.03 (31197.8)  
PI (pH):   %s   9.79 (9.15) Peptide Signal:   %s   cut: 37 range:37-331
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GCDASILIAS PSEKDHPDDM SLAGDGFDTV VKAKQAVDRD PKCRNKVSCA DILALATREV VVLVQTGGPS YPVELGRRDG RLSTKASVQN NLPQPGFNLN QLNTMFNRHG LSQTDMIALS  GAHTLGFAHC GKFSNRIYNF SPRTRIDPSL NSGYALQLRQ MCPQRVDPRI AINMDPTTPR TFDNAYFKNL QQGKGLFTSD QVLFTDQRSR ATVNSFANSE TAFRQAFVSA ITKLGRVGVK 
TGNAGEIRRD CSRFN 

Retrieve as FASTA  
Remarks Partial sequence from GSS only (BH727983, BZ031452, BZ508226). PS is missing. Contained 3 introns.