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Entry information : BoPrx45-1Ca_other
Entry ID 3015
Creation 2006-09-01 (Christophe Dunand)
Last sequence changes 2006-09-01 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2012-05-10 (Christophe Dunand)
Peroxidase information: BoPrx45-1Ca_other
Name BoPrx45-1Ca_other
Class Class III peroxidase     [Orthogroup: Prx020]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type Etiolated seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx45-1Ca_other
start..stop		 S start..stop
AtrPrx46 290 3.15e-99 1..228 24..315
MePrx133 263 1.21e-88 1..228 27..324
EcamPrx67 263 1.27e-88 1..228 28..325
EguPrx68 262 3.26e-88 1..228 28..325
Literature and cross-references BoPrx45-1Ca_other
Literature Barker,G.C., Sharp,A., Durkin,J., Naylor,R., Edwards,R., Gjetvaj,B., Lydiate,D. and King,G. Analyis of EST libraries of Brassica oleracea prepared from differing stages of development, Unpublished (2005)
DNA ref. GenBank:   BH579830  BZ472215
Protein sequence: BoPrx45-1Ca_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   228 (302)
PWM (Da):   %s   24527.49 (31925.8)  
PI (pH):   %s   9.95 (6.11) Peptide Signal:   %s   cut: 30 range:27-328
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
FYQRSCPTLE NIVRNAVRQK FQQTFVTAPA TLRLFFHDCF VRGCDASILL ASPSERDHPD DMSLAGDGFD TVVKAKQAVD RDPNCRNKVS CADILALATR EVVVLxxxxx xxxSPKTRID 
PSLNRGYAFQ LRQMCPIRVD PRIAINMDPT SPRTFDNAYF KNLQQGRGLF TSDQVLFTDR RSRATVNMFA NSEGAFRQAF ISAITKLGRV GVKTGNAGEI RRDCSRVN 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST and 2 GSS (BH579830, BZ472215). No overlap between the two fragments but based on the homology with AtPrx45, the two fragments has been considered as coming from the same sequence.