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Entry information : BrPrx25-1Aa_other (Bra016930)
Entry ID 3049
Creation 2007-01-12 (Christophe Dunand)
Last sequence changes 2007-01-12 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-07-24 (Christophe Dunand)
Peroxidase information: BrPrx25-1Aa_other (Bra016930)
Name (synonym) BrPrx25-1Aa_other (Bra016930)
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx25-1Aa_other
start..stop		 S start..stop
TsPrx25 633 0 1..326 1..326
BrPrx25-1Ab_other 618 0 1..326 1..326
BstrPrx81 616 0 1..326 1..326
AalpPrx25 616 0 1..326 1..325
Literature and cross-references BrPrx25-1Aa_other (Bra016930)
Literature Ryu,S.H., Kang,J.S., Yang,K.A. and Lim,C.O.
Expressed Sequence Tags of Chinese cabbage Roots, Unpublished (2004)
DNA ref. GenBank:   AC189568.2 (23914..22305)
EST ref. GenBank:   EX137733.1 [5' end]  CV432861.1 [Fragment]
Protein sequence: BrPrx25-1Aa_other (Bra016930)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (302)
PWM (Da):   %s   35272.68 (32595.3) Transmb domain:   %s   i30-52o
PI (pH):   %s   6.04 (6.04) Peptide Signal:   %s   cut: 25 range:25-326
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGVYFGNYCY VMIIVLVLGA EVRSQSLKNG YYSTSCPKAE SIVRSTVESH FDSDPTISPG LLRLHFHDCF VQGCDGSVLI KGKSAEQAAL ASSGLRGFEV IDDAKARLES VCPEVVSCAD  ILALAARDAV DLSSGPSWTV PTGRKDGRIS LASEASNLPS PLDSVAVQKQ KFQAKGLDTH DLVTLLGAHT IGQTDCQFFR YRLYNFTVTG NSDPTISPSF LTQLKTLCPP NGDGSKRVAL 
DIGSPSNFDV SFFKNLRDGN GILESDQRLW SDSETNDMVK KYASTIRGLL GFRFDNEFGK AMIKMSSIDV KTDVDGEVRK ICSQVN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns) and 2 ESTs. Cultivar="Chiifu", sub_species="pekinensis.