Entry information : HaGPx04 (HanXRQChr01g0002361)
Entry ID 3071
Creation 2006-05-19 (Marcia Pinheiro Margis)
Last sequence changes 2016-05-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaGPx04 (HanXRQChr01g0002361)
Name (synonym) HaGPx04 (HanXRQChr01g0002361)
Class Plant glutathione peroxidase    [Orthogroup: Gpx2002]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaGPx04
start..stop
S start..stop
NtGPx05-1B 279 5.14e-98 1..167 1..167
NtGPx05-1A 275 1.81e-96 1..167 1..167
StGPx05 270 2.78e-94 1..167 1..167
EgrGPx09 268 1.33e-93 1..167 1..167
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '3071' 'complement(join(9282915..9282947,9283723..9283890,9284147..9284265,9285170..9285231,9286327..9286403,9286515..9286568))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 9286515..9286568 52 N° 2 9286327..9286403 75 N° 3 9285170..9285231 60 N° 4 9284147..9284265 117
N° 5 9283723..9283890 166 N° 6 9282915..9282947 31  
complement(join(9282915..9282947,9283723..9283890,9284147..9284265,9285170..9285 231,9286327..9286403,9286515..9286568))


exon

Literature and cross-references HaGPx04 (HanXRQChr01g0002361)
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L., Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project.
DNA ref. HanXRQ genome:   HanXRQChr01 (9286568..9282915)
Cluster/Prediction ref. HanXRQ:   HanXRQChr01g0002361 UniGene:   Han.6693
Protein sequence: HaGPx04 (HanXRQChr01g0002361)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   170 (308)
PWM (Da):   %s   18814.67 (32653.3)  
PI (pH):   %s   9.34 (7.67) Peptide Signal:   %s   cut: 37 range:37-344
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGAAPSVPENSIHEFTVKDAKGKDVDLSIYKGKVVLIVNVASKCGFTNSNYPKMAELHVKYRDGFEILAFPCNQFLYQEPEASEKVEEFACSRFNAEYPIFQIRVNGPKAAPLYNFLKAKKGGFCGSRIKWNFTKFLVDKEGQVIGRYGTSTSPLSIEG
DIQKALNAQ*

Retrieve as FASTA  
Remarks Complete sequence from genomic, 2 ESTs (TIGR TC14681) and 4 ESTs from Unigene (BU017007, CD848888, DY920274, DY919597). Cultivar="RHA280" and "ANN1312".
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTGCAGCTCCATCTGTTCCTGAAAACTCAATCCATGAGTTCACTGTCAAGGTGGTATTATTATTTTTACATCTTTATAATATTTATATATTTATATTTATAGTTTTGAATATTGAG
TTTTGTTTTGTTTTGAGGGATTATTTGATTGAATTTTGAGTGCAGGAGATGCCAAAGGGAAGGATGTGGATCTGAGTATCTACAAAGGAAAAGTTGTTTTGATTGTTAATGTTGCTTCCA
AATG
GTTGTTTCTGTTTCTGTTCTGTGTCTTGTTTTTTGGTTTTTTTGGTTTTTTGGGATTTGGGTTTATGCAATGTTTTAAAAACCGGTTTTTAAATCATACTGGGTGGGTTAGGCTCA
TGGTTCAATCGGTTGAACCGGATTGACTAATTAACCCTGTAAATCCATGAAATACGATTTCAACTCAAAAAATAATCCAAAGTACATCATCCCATCATAAAAAAATAGGCAAATTGGATT
TAAGTAATCCTAACCGATAATAATCCCAACTCAGTTGTTTGCTGATAATAATCCGAACCGGTCCACTTTTGGCCGATAATAGTCTGCGTTAAAAATAGCTTAACGGAGTTAAGTTTTTTT
CCGAATTACAAACCGATGTTTTAGGGCTTTTGATTAGAACGTGGATACAAGTTAATTGATGTAAAATTTACCTCGAAATATTGTCCAAAACGACGAAAACGGTGCTTCAATTCGGGTGTC
AAAACTTCCAATTAACAAAAATCAAGCCGTTTGGAGCACCGTTTCGAGGTAAGTTTTACATAAATCGACTCGTATCCCTGTTCTGATTAAAATCCCTAAAACATTGGTTATCGGAAAAAA
CTTAACTCCGTTAAGCTATTTTTAACGGCAGACTATTATCGACCAAAAGTGGACCAGTTCGGATTATTATCGGCAAATAACTGAGTTGAGATTATTATCGGCCAAATTGAGAAAGTTGGG
ATTATTTAAATCCAATTTGCCTAAAAAATATTCCAAAAGCTAATCCATAATAAATAAATAACCCAATGTTCGATGTGAATTGTGGATGAATTTTGATTGATGTGGATTGTGGGCGCTAGG
TTTAACTAAGAATGTAAATCGTCACCTTTTTGGGCCCATAAAAGATTAAAAGTCCAAATTTTAACCTTGGTACTGGTATAACCCAATTTACCGGTGGTACAGCTTCTTTGCCGTTCCCTT
AGTTTACCGGTGTGATTCGAGCCAGGCAAGCTTCCGGCATCCGGTTGGTTTAAACCGGTTTTTAAAACCATGGGTTTATGTGTGATTGTTTTGTGTTTTGTTCTAATTGTTTGTTTATTG
TTTTGTTGGGTTGGATTAGTGTGGGTTTACAAACTCGAATTACCCGAAAATGGCTGAGCTTCATGTGAAGTATAGAGATAAAGGTATGATTTCACTTGTCAAAGCTTTACATCTTCACTA
AATGTTAGTGATTTTTTTTACTAATTTTGGTGATAATGAATTAATTAATTAAAGGCAAACCGGATTTAAATAATCCGAACGGGCTGTTTTTTGGACAATAATAACCCCAACTGAGTTTAT
TCCTGACCGTGGTCTAATCTTTTTCATTTTGTTTGTATAATGGTCCGCCGTAAAAAATAACTAAACGGAGTTAAGTTTTTTTTTCCAAATTACAAACCAATGTTTTAGGGCTTTTGATCA
GAACGAGGATACGAGTTGATTGATGTAAGACTTACCTTGAAACGGTGCTCCAAACGGCTTGATTTTTGTTAATTGAAAGTTTAAACACCCAAATTGAAGCACCGTTTTCATCGTTTTGAG
CACTGTTTCGAGGTAAATTTTACGTCAATCGACTCGCATCCTCGTTCTGATCAAAAGCCCTAAAACATCGGTTTCTAAATTTGGAAATTAGAAACAGTTTTACATAATTACCTATGCAGT
TAATATCGGTGATTTATCGGTCCTCTAGTAGAATATCAGTACCAATATTATCGGCGATATTTGACCGAAATCACCGATATATCACTGAATTGTTAATTATAAATTGCTGTGTATATAAAT
TCTGCATGATATTAAAATTACCGATGTCCCACCGCGATAACCTATATCTGAAATATCGGTCCTTGACCGATATCCGTTATTTTACTGTACTAACTGCATAGAATTGTATTGTCAAAAGAA
TACAAAAAATTAAAATTCATCATTATAGTACATGCCCATATGATAAAATTATTGCTATGACAGTTGTAGCTTCACAAATTTGTTATGCTTATAGTAAAAAAAAATATATATATATCTATA
GTAACATGTTCTAGTAACAATCATCAGGTGTTTCGAGATCCTGGCATTTCCATGCAATCAATTCTTGTACCAAGAACCTGAAGCAAGTGAAAAGGTGGAAGAATTTGCATGTTCGAGGTT
TAACGCTGAATATCCCATCTTCCAAAAG
GTTAGTATTCGATAAAATTCTATGTTACTTCAGCCATATAAAGCACATCATCCGAAACACCTACAAAGAGATCTGAAATGTAAAAACAATCG
GTTGGTTTGCAAGACCATTTTCATAGGAGAATTGTGGATCTTTCGAGTACCAAAAATCTTATTATGCGTTCTCTTGTGCGTGTATGCATGATCAACTATGGAACCATGGCATGTTTGACT
TTCAAAACGGTCAAATTGTTTATCTTCGTTTGGTTTTTTTGAAGATATTCGTGTCAACGGGCCTAAGGCAGCGCCTTTGTACAACTTTCTTAAAGCCAAAAAAGGAGGGTTCTGCGGGTC
TAGAATCAAATGGAACTTCACAAAGTTTCTTGTGGATAAAGAAGGCCAAGTCATAGGTCGTTATGGAACATCTACTTCACCGTTATCAATCGAG
GTAACTTGTCCCCCCCCCTTTTTTAT
TTTTTGTTTGAGTAATGTATCCGAATGATCCCTGTGGTTTACCAAAATTTTGGATTTGTTCCCTAGTTTTCCAAAAGTACATGGATGGTCCTGTGGTTTGCACTTTGTAACGCCTTTAGT
CCCCAGGTTTTTCCGAAAGTACACGGATGGTCCCTGCGGTTTGCACTTTGTAACGCGTTTCGTCCCTAGGTTTTTCCGAAAGTACATGGATGGTCCCTGCGGTTTGCACTTTGTAACGCG
TTTCGTCCCTAGGTTTTTCCGAAAGTACATGGATGGTCCCTGTGGTTTGCACTTTGTAACGCATTTAGTTCCTAAATTGGACCTGCTAAAACCTTTAGATTTGTTTGCCGGGGACTAAAT
GCGTTACAAAATACAAACCACAAGGACCATCCGTGCATTTTTTAAAAACCAGGGACAAAATCCAAAATTTTGGTAAGCTGCAGGGACCATCCGTGTACTTTACTCTTTTTGTTTCTTCTC
CGATCAAATTTGGCAGTTACTTAAAAATGGGCCGATTCGGGTTTAATGTTTTGACTAACTAACAAGTAAATTTACAGATAAATATTAAAATGTTTTGACTAACTAACAAGTAAATTTGCA
GATAAATATTAAAAAATAGCTTAAAGGGAAACGGGTCAAAAGTTGTCCAAAGTTCAGTATATATTTTACAAAAATAGATGTTTTGGGTCAAGTCAATTTGTACAAAAATTTAATCGGTAA
CGGTTCTAGCCTCATTAATTTCATTACAGGGGGTGATATTCAAAAGGCGTTGAACGCTCAGTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTGCAGCTCCATCTGTTCCTGAAAACTCAATCCATGAGTTCACTGTCAAGGATGCCAAAGGGAAGGATGTGGATCTGAGTATCTACAAAGGAAAAGTTGTTTTGATTGTTAATGTT
GCTTCCAAATG
TGGGTTTACAAACTCGAATTACCCGAAAATGGCTGAGCTTCATGTGAAGTATAGAGATAAAGGTTTCGAGATCCTGGCATTTCCATGCAATCAATTCTTGTACCAAGAA
CCTGAAGCAAGTGAAAAGGTGGAAGAATTTGCATGTTCGAGGTTTAACGCTGAATATCCCATCTTCCAAAAG
ATTCGTGTCAACGGGCCTAAGGCAGCGCCTTTGTACAACTTTCTTAAA
GCCAAAAAAGGAGGGTTCTGCGGGTCTAGAATCAAATGGAACTTCACAAAGTTTCTTGTGGATAAAGAAGGCCAAGTCATAGGTCGTTATGGAACATCTACTTCACCGTTATCAATCGAG
GGTGATATTCAAAAGGCGTTGAACGCTCAGTGA

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GTAGAAGAAA AGTCAATATA TTGCAATCAA TTCCCAGAAG ACATTTGCTG GCCATTTCAA CCACCTTCCC TTCATTCCCG TGCACCTGTC TAATTCAATC TAAAAAACCC ACCCTCTTCA  CCATCACTTC CGTTAACTTT AACGGTAACA TCTCAAATGG GTGCAGCTCC ATCTGTTCCT GAAAACTCAA TCCATGAGTT CACTGTCAAG GATGCCAAAG GGAAGGATGT GGATCTGAGT  ATCTACAAAG GAAAAGTTGT TTTGATTGTT AATGTTGCTT CCAAATGTGG GTTTACAAAC TCGAATTACC CGAAAATGGC TGAGCTTCAT GTGAAGTATA GAGATAAAGG TTTCGAGATC  CTGGCATTTC CATGCAATCA ATTCTTGTAC CAAGAACCTG AAGCAAGTGA AAAGGTGGAA GAATTTGCAT GTTCGAGGTT TAACGCTGAA TATCCCATCT TCCAAAAGAT TCGTGTCAAC  GGGCCTAAGG CAGCGCCTTT GTACAACTTT CTTAAAGCCA AAAAAGGAGG GTTCTGCGGG TCTAGAATCA AATGGAACTT CACAAAGTTT CTTGTGGATA AAGAAGGCCA AGTCATAGGT  CGTTATGGAA CATCTACTTC ACCGTTATCA ATCGAGGGTG ATATTCAAAA GGCGTTGAAC GCTCAGTGAG ATCAATGAAC TAGTCAAGTT CTCTTAAAAG TGAAGGTAAG CAAGATCCCT  ACAATCATAT CAGTACGAGA CCCGTCTACA GAAACGTGCT TTTTAGTGGT ATAGCATAGC TGTGTAAAGG TGAACCGTGA TGCTTGAGAG TTAAAGATAT TGGTTTGATA TGTGCGGTTT  CTAAGGATGA TTTCGGTTGT ATTGTTCTTA TTTATTTATT ATAATTATGT TGGTTGTTTA ACAACGTGAA AGCAGAAGAC AAAGCTTGTG AATATTCATC GTTTCCAGGG GCGCAACTAT 
TAGGGG 

Retrieve as FASTA