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Entry information : PtPrx07 (POPTR_0004s05140 / Potri.004G052100)
Entry ID 3085
Creation 2006-06-14 (Claudia Cosio)
Last sequence changes 2006-06-14 (Claudia Cosio)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-03-07 (Qiang Li)
Peroxidase information: PtPrx07 (POPTR_0004s05140 / Potri.004G052100)
Name (synonym) PtPrx07 (POPTR_0004s05140 / Potri.004G052100)
Class Class III peroxidase    [Orthogroup: Prx025]
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus trichocarpa (Western balsam poplar)    [TaxId: 3694 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtPrx07
start..stop		 S start..stop
PtPrx64 612 0 1..345 33..377
MePrx10 584 0 15..344 23..347
RcPrx49 580 0 11..344 17..352
CsPrx13 568 0 15..344 22..354
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '3085' 'complement(join(3879510..3880088,3880890..3881090,3881231..3881488))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 3881231..3881488 256 N° 2 3880890..3881090 199 N° 3 3879510..3880088 577  
complement(join(3879510..3880088,3880890..3881090,3881231..3881488))


exon

Literature and cross-references PtPrx07 (POPTR_0004s05140 / Potri.004G052100)
Literature DOE joint genome institute.
DNA ref. Phytozome 12:   scaffold_4 (3881488..3879510)
Cluster/Prediction ref. JGI gene:   545229
Omic ref. ePlant:   Potri.004G052100
Protein sequence: PtPrx07 (POPTR_0004s05140 / Potri.004G052100)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   345 (321)
PWM (Da):   %s   37946.57 (35424.2)  
PI (pH):   %s   9.58 (9.57) Peptide Signal:   %s   cut: 25 range:25-345
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPALSSSSSSICTFLLVFLLVVRASNCAAKATKSSRPPRQLSVDY
YAKKCPQLEQLVGSVTSQQFKEAPVSGPATIRLFFHDCFVEGCDASILISTNPGSKELAEKDAEDNKDLRVEGFQTISKAKDLVERKCPGIVSCADILAIAARDYVHLAGGPYYQVKKGRWDGKISMASRVPYNIPRANFTIDQLLKLFNSKGLTLEDLVV
LSGAHTFGFAHCKQFVSRLYNYRGTKQPDPGMDPRLLKALKMSCPQFGGNPDIIAPFDVTTPFLFDHAYYGNLEAKLGLLASDQALFLDPRTKPLVQQLGKDKKSFFQAFSIAMEKMGSI
GVKRGRRHGETRRVCSMHT*

Retrieve as FASTA  
Remarks Complete sequence from genomic DNA (3 introns). 1 EST from Populus trichocarpa x Populus deltoides (CV276131).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCTGCTCTTTCTTCTTCTTCTTCTTCTATTTGCACTTTCTTGCTTGTTTTCTTACTTGTTGTAAGAGCCTCAAATTGTGCAGCCAAAGCCACCAAGAGCTCTCGCCCTCCACGCCAA
TTATCTGTTGATTACTATGCTAAAAAGTGCCCTCAACTTGAGCAGCTTGTTGGTTCAGTCACTTCCCAACAGTTCAAAGAAGCACCAGTCTCAGGGCCAGCCACCATTCGCCTGTTCTTT
CATGACTGCTTTGTAGAAGTAATCTCGATTCCACATTCTCTATTATCCTTGCCATGCATGCTCTATGCTTTAGCTTATTATCATGCTACATTTTTTGTAGCATAAATTAATTGATAAATT
ACCATCTTACTTAAATTTGATGCGTGGTTATATTGAAGGGGGCTGTGATGCATCAATATTGATATCAACAAACCCTGGAAGTAAAGAGTTGGCAGAGAAGGATGCAGAGGACAATAAGGA
CTTGAGGGTGGAGGGATTTCAGACTATAAGCAAGGCCAAGGACTTGGTGGAGAGAAAGTGCCCTGGTATTGTTTCTTGTGCAGACATTCTTGCAATTGCAGCCAGAGATTATGTCCACCT
CGTATGTGCCTCATTTTCCTCCTCCTTCAATATCATACTCATCATTTCTGTTTTATGCTCTTGAATATATTTCTCCACACCAAATGTATCTCCATGTTGAAGCTTGAGTTTCCTTGTTCT
ATGCTCAAGTTGCAAGCTGCTATGATGTTATTACACAGTCTGCTTAGAAGAAAAAAAACAGCTTAATTTCCCTCTTTTGTTTTGGTGTAAACATATTTGCTACATAATGCTTCCTCTGTA
GAAAGGTGGAGAAAAAAGTAGTTTGGTCATTTTTTAGGACAAAAACATGTAAACTTAGCATAGAAGGACACAAAAGGAGAACATTTATATTTCTATTTTCTCTTTTTGTCACTTGAATCA
CAGGTCTGCTTTGAACAGCTAAAGCCACTGTGCCTGTAATTTGTCCTAACCATAACAACATTGAAACTTCCAGTCTTCTGGGCTGGTTAGATCAGGTCACCATGGGAGACAAGGTTAATG
ATTAGTATTGGCATGTAAATTAATAGGGACAATCGAATCTCGTGATTTTATTAATTGCATTGAAAAATACCAAACACCTCTTTCATGATGTCAATACAAGAGGACAAGAACATCCATGTC
GTGTTTCCAGCTTGTTCTGATTTCACATCAGGATAAAAGAACTTCTAATTTTTATTATTACAGGATGAGATTCTTTCAATTACTAATTATTAAAACAACATTGTCATCATCAAATAATGA
TATTTTTTTTGTCCAATAGCATCATTATCTATTAACCAAGGGTTCGTGCCCTGGTTTCATCTGTTACGTTTATGTGGCTCAGGCGCAGGAGGTCCTTATTACCAGGTGAAGAAAGGGAGG
TGGGATGGGAAAATATCAATGGCATCTAGGGTGCCGTACAACATCCCTCGTGCAAATTTCACCATTGATCAACTACTAAAACTCTTCAACTCTAAAGGACTAACACTTGAGGACCTAGTC
GTTCTTTCTGGTGCTCATACATTTGGATTTGCTCACTGTAAGCAATTTGTTAGCCGACTCTACAATTACCGTGGCACTAAACAGCCTGATCCTGGCATGGATCCAAGGCTACTAAAAGCT
CTTAAAATGTCCTGCCCACAATTCGGTGGGAATCCAGACATTATTGCACCATTTGATGTTACAACTCCGTTCTTGTTTGATCATGCTTATTATGGGAATTTAGAGGCTAAATTGGGGTTG
TTGGCCTCGGACCAAGCTCTATTTTTGGACCCAAGAACCAAGCCCTTGGTTCAACAATTAGGAAAGGATAAGAAAAGTTTCTTCCAAGCATTTTCAATAGCTATGGAGAAAATGGGCTCA
ATTGGTGTGAAAAGGGGAAGAAGACATGGAGAGACGAGGAGAGTTTGCAGTATGCATACATAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCTGCTCTTTCTTCTTCTTCTTCTTCTATTTGCACTTTCTTGCTTGTTTTCTTACTTGTTGTAAGAGCCTCAAATTGTGCAGCCAAAGCCACCAAGAGCTCTCGCCCTCCACGCCAA
TTATCTGTTGATTACTATGCTAAAAAGTGCCCTCAACTTGAGCAGCTTGTTGGTTCAGTCACTTCCCAACAGTTCAAAGAAGCACCAGTCTCAGGGCCAGCCACCATTCGCCTGTTCTTT
CATGACTGCTTTGTAGAAGGCTGTGATGCATCAATATTGATATCAACAAACCCTGGAAGTAAAGAGTTGGCAGAGAAGGATGCAGAGGACAATAAGGACTTGAGGGTGGAGGGATTTCAG
ACTATAAGCAAGGCCAAGGACTTGGTGGAGAGAAAGTGCCCTGGTATTGTTTCTTGTGCAGACATTCTTGCAATTGCAGCCAGAGATTATGTCCACCTCGCAGGAGGTCCTTATTACCAG
GTGAAGAAAGGGAGGTGGGATGGGAAAATATCAATGGCATCTAGGGTGCCGTACAACATCCCTCGTGCAAATTTCACCATTGATCAACTACTAAAACTCTTCAACTCTAAAGGACTAACA
CTTGAGGACCTAGTCGTTCTTTCTGGTGCTCATACATTTGGATTTGCTCACTGTAAGCAATTTGTTAGCCGACTCTACAATTACCGTGGCACTAAACAGCCTGATCCTGGCATGGATCCA
AGGCTACTAAAAGCTCTTAAAATGTCCTGCCCACAATTCGGTGGGAATCCAGACATTATTGCACCATTTGATGTTACAACTCCGTTCTTGTTTGATCATGCTTATTATGGGAATTTAGAG
GCTAAATTGGGGTTGTTGGCCTCGGACCAAGCTCTATTTTTGGACCCAAGAACCAAGCCCTTGGTTCAACAATTAGGAAAGGATAAGAAAAGTTTCTTCCAAGCATTTTCAATAGCTATG
GAGAAAATGGGCTCAATTGGTGTGAAAAGGGGAAGAAGACATGGAGAGACGAGGAGAGTTTGCAGTATGCATACATAA

Retrieve as FASTA