Entry information : PtPrx[P]17 (POPTR_0010s15760 / Potri.010G147800)
| Entry ID | 3093 |
|---|---|
| Creation | 2010-01-15 (Christophe Dunand) |
| Last sequence changes | 2012-03-08 (Qiang Li) |
| Sequence status | theoretical translation / pseudogene |
| Reviewer | Not yet reviewed |
| Last annotation changes | 2012-03-08 (Qiang Li) |
Peroxidase information: PtPrx[P]17 (POPTR_0010s15760 / Potri.010G147800)
| Name (synonym) | PtPrx[P]17 (POPTR_0010s15760 / Potri.010G147800) | |||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Class | Class III peroxidase [Orthogroup: Prx029]* | |||||||||||||||||||||||||
| Taxonomy | Eukaryota Viridiplantae Streptophyta Salicaceae Populus | |||||||||||||||||||||||||
| Organism | Populus trichocarpa (Western balsam poplar) [TaxId: 3694 ] | |||||||||||||||||||||||||
| Cellular localisation | N/D |
|||||||||||||||||||||||||
| Tissue type | N/D |
|||||||||||||||||||||||||
| Inducer | N/D |
|||||||||||||||||||||||||
| Repressor | N/D |
|||||||||||||||||||||||||
| Best BLASTp hits |
|
Literature and cross-references PtPrx[P]17 (POPTR_0010s15760 / Potri.010G147800)
| Literature | DOE joint genome institute. |
|---|---|
| DNA ref. | Phytozome 12: scaffold_10 (14883767..14884973) |
| Omic ref. | ePlant: Potri.010G147800 |
Protein sequence: PtPrx[P]17 (POPTR_0010s15760 / Potri.010G147800)
| Sequence Properties first value : protein second value (mature protein) |
|
||||||||||||
| Sequence Send to BLAST Send to Peroxiscan |
|
||||||||||||
| Remarks | Pseudogene. Sequence from genomic (chromo 10). Frame shifts start of exon 1, and end of exon 3 and 4. Stop codon. join(14883767..14883778,14883799..14883993,14884093..14884257,14884343..14884515,14884593..14884762,14884777..14884973). | ||||||||||||
| DNA ► Send to BLAST |
|
||||||||||||
