1. Browse the Database
  2. View Redoxidase
Entry information : BrAPx01-1Ab_other (Bra018677)
Entry ID 3123
Creation 2007-09-21 (Christophe Dunand)
Last sequence changes 2007-09-21 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-07-20 (Christophe Dunand)
Peroxidase information: BrAPx01-1Ab_other (Bra018677)
Name (synonym) BrAPx01-1Ab_other (Bra018677)
Class Ascorbate peroxidase    [Orthogroup: APx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation Cytosolic
Tissue type Etiolated seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrAPx01-1Ab_other
start..stop		 S start..stop
BnAPx01_other 515 0 1..250 1..250
BoAPx02_other 512 0 1..250 1..250
RsAPx01 511 0 1..250 1..250
BoAPx01_other 488 2.8e-178 1..250 1..250
Literature and cross-references BrAPx01-1Ab_other (Bra018677)
Literature Ryu,S.H., Yang,K.A., Lee,S.Y., Kim,H.-I., Cho,M.J. and Lim,C.O. Expressed Sequence Tags of Chinese Cabbage Etiolated Seedling cDNA,Unpublished (2002)
EST ref. GenBank:   EX135504
Protein sequence: BrAPx01-1Ab_other (Bra018677)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   250
PWM (Da):   %s   27565.84  
PI (pH):   %s   5.99
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTKNYPAVSE EYQKAIEKCK RKLRGLIAEK NCAPIMVRLA WHSAGTFDCA SRTGGPFGTM RFDDELAHGA NNGLHIALRL LEPIREQFPT ISHADFHQLA GVVAVEVTGG PEIPFHPGRE  DKPQPPPEGR LPDATKGCDH LRQVFLKQMG LTDQDIVALS GAHTLGRCHK DRSGFEGAWT SNPLIFDNSY FKELLSGEKE GLLQLPSDKA LLDDPVFRPL VEKYANDEEA FFADYAEAHL 
KLSELGFADA 

Retrieve as FASTA  
Remarks Complete sequence from genomic and 100 ESTs. Incorrect prediction from Phytozome: 2 extra exons in 5' and last exon is missing