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Entry information : BrAPx01-1Aa_other (Bra031598)
Entry ID 3125
Creation 2006-05-23 (Christophe Dunand)
Last sequence changes 2012-07-20 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-07-20 (Christophe Dunand)
Peroxidase information: BrAPx01-1Aa_other (Bra031598)
Name (synonym) BrAPx01-1Aa_other (Bra031598)
Class Ascorbate peroxidase    [Orthogroup: APx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrAPx01-1Aa_other
start..stop		 S start..stop
BjAPx02 511 0 1..250 1..250
BoAPx01_other 509 0 1..250 1..250
BnAPx02_other 509 0 1..250 1..250
TparAPx01 502 0 1..250 1..250
Literature and cross-references BrAPx01-1Aa_other (Bra031598)
Literature Ryu,S.H., Kang,J.S., Yang,K.A. and Lim,C.O. Expressed Sequence Tags of Chinese cabbage Roots, Unpublished (2004)
EST ref. GenBank:   EX117278.1
Protein sequence: BrAPx01-1Aa_other (Bra031598)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   250 (297)
PWM (Da):   %s   27488.8 (31928.7) Transmb domain:   %s   i5-27o
PI (pH):   %s   6.04 (6.74) Peptide Signal:   %s   cut: 26 range:26-322
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTKSYPTVSE DYQKAIEKCK RKLRGLIAEK NCAPIMVRLA WHSAGTFDCA SRTGGPFGTM RFDAEQGHGA NSGIHIALRL LEPIREQFST ISFADFHQLA GVVAVEVTGG PEIPFHPGRE  DKPQPPPEGR LPDATKGCDH LRQVFTKQMG LSDKDIVALS GAHTLGRCHK DRSGFEGAWT SNPLIFDNSY FKELLSGEKE GLLQLVSDKA LLDDPVFRPL VEKYAADEEA FFADYAEAHL 
KLSELGFADA * 

Retrieve as FASTA  
Remarks Complete sequence from genomic (6 introns) and 5 ESTs (Brassica rapa subsp. pekinensis). Incorrect prediction from Phytozome: last short exon is missing.