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Entry information : PtPrx80 (POPTR_0009s10960 / Potri.009G106400)
Entry ID 3175
Creation 2006-05-24 (Claudia Cosio)
Last sequence changes 2010-06-17 (Marie Brette (Scipio))
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-03-08 (Qiang Li)
Peroxidase information: PtPrx80 (POPTR_0009s10960 / Potri.009G106400)
Name (synonym) PtPrx80 (POPTR_0009s10960 / Potri.009G106400)
Class Class III peroxidase    [Orthogroup: Prx024]
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus trichocarpa (Western balsam poplar)    [TaxId: 3694 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtPrx80
start..stop		 S start..stop
PtrePrx02 576 0 1..337 1..337
PtPrx70 572 0 1..337 1..337
RcPrx31 496 3.78e-178 1..337 1..335
PpePrx08 493 2.08e-177 1..337 1..332
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '3175' 'complement(join(9254981..9255390,9255741..9255906,9256010..9256201,9256685..9256930))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 9256685..9256930 244 N° 2 9256010..9256201 190 N° 3 9255741..9255906 164 N° 4 9254981..9255390 408
complement(join(9254981..9255390,9255741..9255906,9256010..9256201,9256685..9256 930))


exon

Literature and cross-references PtPrx80 (POPTR_0009s10960 / Potri.009G106400)
Literature DOE joint genome institute.
DNA ref. Phytozome 12:   scaffold_9 (9256930..9254981)
Omic ref. ePlant:   Potri.009G106400
Protein sequence: PtPrx80 (POPTR_0009s10960 / Potri.009G106400)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   337 (312)
PWM (Da):   %s   36741.23 (33927.7) Transmb domain:   %s   i5-27o
PI (pH):   %s   6.87 (6.27) Peptide Signal:   %s   cut: 26 range:26-337
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAKTLFSYFTIPLFLCLSSLHLVTSFPFGSGQIDYNYNYNYYDRS
CPRLGMIVKYGVWAAFKNDTRIAASLLRLHFHDCFVNGCDASILLDDTIDFRGEKNAFPNRNSVRGYEVIESIKADVENACSSTVSCADILTLAARESVLLSGGPYYPLSFGRRDGLTASEKAANEQLPSPIEPLENITAKFTSKGLDMKDVAVLSG
AHTIGFAQCFTFKRRLFDFKGTGKPDPTLESLALTNLQGMCPNKDASNSNLAPLDYASTYRFDNAYYVNLVNSTGLLESDQALMGDPRTAALVTAYSSNSYLFSADFASSMTKLSNLGIL
TGSNGQIRKKCGSVN

Retrieve as FASTA  
Remarks Complete sequence from genomic DNA (3 introns). No EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTAAGACACTCTTCTCATACTTCACCATTCCCTTGTTTCTTTGCTTGTCTTCGCTTCACTTAGTCACTTCCTTCCCTTTTGGTAGTGGTCAGATTGATTACAATTACAACTACAAT
TACTATGACAGGTCATGCCCCCGTTTGGGAATGATTGTTAAGTATGGTGTCTGGGCTGCTTTCAAGAATGACACCAGAATCGCTGCATCCCTCCTTCGATTGCATTTTCATGACTGCTTT
GTAAACGTAATACTACTTAATCCATTTCTCTCTTGTCACGGGGTCAATTTTCTCGGCAAAATTTCCGGCCCTTATGCGGCAGTCTAATCTTGCTAGACTCATTCTTTCGCTTACCTATTT
ACTTGTTGTGTTTGCTTATAACTAGCTTGTCCCACAAATCCAAGAGATTACCTACATTCTTTTAATGTTGTAAATAAGAGAAATACACAAATGAATATAAATAGAAACAAGCACACAAGT
TATTAACAGGAACCAATCTTAATCTTTTACTAACATAAAAGATATACACAAGTCCATCTGCGTGCACATTTATTCTGCCTTCAGAACCTGCAACTTGATTGCACCCTTAACATGGTTAGA
AATTGAGACTTACTGGATAGATAGAGATTGGATTTATTTCTCATGTTGGGTCAAAACTGAAGAGCAGGCTATAATACTATATGCACATGACTTGAAATTTATTGACCAACTTATATAATG
ATCTTATAGGGGGCTGCGATGCTTCGATACTTTTAGATGACACGATTGATTTCAGGGGAGAGAAGAATGCTTTTCCTAACCGTAATTCAGTTAGAGGATATGAAGTCATTGAAAGTATCA
AGGCAGATGTTGAAAACGCTTGCTCATCAACTGTTTCATGTGCTGATATATTGACTCTTGCAGCAAGAGAATCTGTCCTTTTGGTACTAACATTGCTCATATTCTTTATTCATTCATCGT
GCTCCTACGACATATTCTATTCTTTGTTCTAAAATCTTTATCCATTTACTTCATTTTCTGGTTCAGTCTCAGGAGGGCCTTATTATCCTCTTTCATTTGGCCGAAGAGATGGATTGACAG
CAAGTGAGAAGGCAGCTAATGAACAATTGCCATCACCTATTGAACCACTAGAAAACATCACTGCTAAGTTCACATCAAAGGGTCTTGATATGAAGGATGTTGCAGTCCTCTCAGGTTCTT
GCCCTTTTCACTCTCTGGTCATCGCTCTCGATTTTAAGCTGTCAATGGAGTGATGTTCTTGTTCAGATCACAATTCAGAACTTTTGATTCCATATATGCCTTGCATTCATAGAGCTTAAA
TTATAGCGACGAAGTTTGCGACACCTCTTCTTTTAATTGGTTTAGACGACCACATTTTGTCGTCATATATATTATCCATCGTTACCTTCTATAAATTTCTTAAGCTCGGGTTTTTGACGA
CGGAACTTTTGGCGACAGCACAACCCAATGAGCAGAACAGAACTTTTTTACTAATTTCTAATACCGTGGACACAAATAATTAATTAGTTTCTTGTTAATTACAGGAGAGCACACACCATA
GGTTTTGCTCAATGCTTTACCTTCAAGAGGAGGCTCTTTGATTTCAAAGGCACCGGCAAGCCTGACCCCACACTAGAATCTTTGGCCTTGACAAACTTACAAGGCATGTGTCCAAATAAG
GATGCATCAAACAGCAATCTTGCTCCTCTTGACTATGCAAGCACATACCGATTTGACAATGCTTATTATGTGAACCTCGTGAACAGCACTGGCCTTCTTGAATCTGATCAAGCTCTGATG
GGGGATCCAAGGACTGCTGCACTTGTTACTGCCTACAGTTCAAATTCGTATCTTTTCTCGGCTGATTTTGCATCATCAATGACGAAGCTTAGCAATCTTGGTATACTTACAGGGAGCAAT
GGGCAAATTAGAAAGAAATGCGGGTCTGTTAACTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTAAGACACTCTTCTCATACTTCACCATTCCCTTGTTTCTTTGCTTGTCTTCGCTTCACTTAGTCACTTCCTTCCCTTTTGGTAGTGGTCAGATTGATTACAATTACAACTACAAT
TACTATGACAGGTCATGCCCCCGTTTGGGAATGATTGTTAAGTATGGTGTCTGGGCTGCTTTCAAGAATGACACCAGAATCGCTGCATCCCTCCTTCGATTGCATTTTCATGACTGCTTT
GTAAACGGCTGCGATGCTTCGATACTTTTAGATGACACGATTGATTTCAGGGGAGAGAAGAATGCTTTTCCTAACCGTAATTCAGTTAGAGGATATGAAGTCATTGAAAGTATCAAGGCA
GATGTTGAAAACGCTTGCTCATCAACTGTTTCATGTGCTGATATATTGACTCTTGCAGCAAGAGAATCTGTCCTTTTGTCAGGAGGGCCTTATTATCCTCTTTCATTTGGCCGAAGAGAT
GGATTGACAGCAAGTGAGAAGGCAGCTAATGAACAATTGCCATCACCTATTGAACCACTAGAAAACATCACTGCTAAGTTCACATCAAAGGGTCTTGATATGAAGGATGTTGCAGTCCTC
TCAGGAGCACACACCATAGGTTTTGCTCAATGCTTTACCTTCAAGAGGAGGCTCTTTGATTTCAAAGGCACCGGCAAGCCTGACCCCACACTAGAATCTTTGGCCTTGACAAACTTACAA
GGCATGTGTCCAAATAAGGATGCATCAAACAGCAATCTTGCTCCTCTTGACTATGCAAGCACATACCGATTTGACAATGCTTATTATGTGAACCTCGTGAACAGCACTGGCCTTCTTGAA
TCTGATCAAGCTCTGATGGGGGATCCAAGGACTGCTGCACTTGTTACTGCCTACAGTTCAAATTCGTATCTTTTCTCGGCTGATTTTGCATCATCAATGACGAAGCTTAGCAATCTTGGT
ATACTTACAGGGAGCAATGGGCAAATTAGAAAGAAATGCGGGTCTGTTAACTAA

Retrieve as FASTA