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Entry information : PabPrx06(px6)
Entry ID 3182
Creation 2006-06-26 (Christophe Dunand)
Last sequence changes 2006-06-26 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2021-01-11 (Christophe Dunand)
Peroxidase information: PabPrx06(px6)
Name PabPrx06(px6)
Class Class III peroxidase    [Orthogroup: Prx073]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea abies (Norway spruce)    [TaxId: 3329 ]
Cellular localisation N/D
Tissue type Cell culture
Inducer Lignification
Repressor N/D
Best BLASTp hits
Perox score E-value PabPrx06
start..stop		 S start..stop
PabPrx07 646 0 1..320 1..320
PabPrx05 616 0 1..320 1..320
PtaPrx75 601 0 1..320 1..320
PtaPrx86 600 0 1..320 1..320
Literature and cross-references PabPrx06(px6)
Literature Koutaniemi,S., Toikka,M.M., Karkonen,A., Simola,L.K., Kilpelainen,I.A. and Teeri,T.H.
Characterization of p-coumaryl and coniferyl alcohol specific peoxidases from a lignin-forming Picea abies suspension culture, Unpublished
Protein ref. UniProtKB:   Q4W2V3
mRNA ref. GenBank:   AJ809341 [Mismatch]
EST ref. GenBank:   AM169322 [5' end]  AM170065 [3' end]
Protein sequence: PabPrx06(px6)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   320 (302)
PWM (Da):   %s   33959.98 (31947.0) Transmb domain:   %s   i7-29o
PI (pH):   %s   9.01 (9.11) Peptide Signal:   %s   cut: 19 range:19-320
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MMMRNLLCIG IMAVFVCSIN INAVSGQLSS TFYDKSCPRA QSIVKRVVKQ ALAKEKRMGA SLVRLHFHDC FVNGCDGSIL LDDNATFTGE KTAGPNANSA RGFDVIDTIK TQVEAACSGV  VSCADILTIA ARDSVVELQG PTWTVMLGRR DSTTASLSSA NNNIPSPASS LSALISSFKG HGLSTKDLVA LSGAHTIGQS RCAFFRTRIY NESNINAAFA TSVKANCPSA GGDNTLSPLD 
VVTPIKFDNK YYGNLKIQKG LLHSDQQLFN GGSTDSQVTA YSTNQNSFFT DFAAAMVKMS NISPLTGTSG QIRKNCRKSN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (incorrect prediction, extra exon in 5' with missing part of PS), 1 cDNA and 3 ESTs (AM170299),
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGATGATGA GGAATCTATT GTGCATTGGG ATAATGGCTG TGTTTGTATG CTCCATTAAT ATAAATGCTG TGAGTGGGCA GCTGAGCTCA ACGTTTTATG ACAAATCGTG TCCGAGGGCT  CAGTCGATAG TGAAAAGAGT AGTGAAGCAA GCTCTCGCTA AGGAGAAAAG AATGGGGGCG TCCTTGGTCC GCCTTCACTT TCACGATTGC TTCGTCAATG TAAGAAAGAG TTTTATTTAG  CTGATAATAA TGACTCGTCA TCAATCATTT CTGCTTTGTT CATCTCGTCA TGCTGAATTT TGGATTCGGT TCTCTTGCAG GGATGCGATG GTTCGATTCT ATTGGATGAC AATGCGACGT  TTACCGGAGA AAAAACTGCA GGTCCAAACG CCAATTCTGC GAGAGGATTC GATGTGATAG ACACCATTAA AACTCAAGTG GAAGCAGCCT GCAGTGGAGT CGTGTCGTGT GCAGACATTC  TCACCATTGC TGCTCGTGAT TCTGTTGTTG AAGTAATCAT CCATTCATCT CCCATTGAAT TACATGTTAA TGATAAATAC AATATCTCAT TTCATTTCGG AGGAACTCGC CGAATTAAAC  ATTGCTCTCT TGTTATTTGT GATTGCAATA TGTTAGCTTC AAGGCCCAAC ATGGACGGTA ATGCTGGGAA GGCGAGACTC TACTACCGCG AGTTTAAGCT CTGCAAACAA CAACATTCCG  TCTCCCGCTT CCAGTCTCAG CGCACTCATC TCATCTTTTA AAGGTCATGG TCTTTCTACC AAGGACCTCG TTGCACTCTC AGGTATAATC TTAGTCATCG AGCCATCATC TTAGCAAACC  ATATAATTTT CATGTCGTTA AATTGAACTC TCATCACGAG CTATTGTTAT TATTATTACA GGTGCTCATA CAATTGGTCA ATCGCGGTGC GCCTTTACAG GTGCTCATAC AATTGGTCAA  TCGCGGTGCG CCTTTTTCAG AACTCGCATC TACAACGAAT CCAACATTAA CGCTGCCTTC GCTACATCTG TGAAGGCAAA CTGCCCAAGC GCTGGTGGGG ACAACACCCT CTCTCCCTTA  GATGTGGTAA CCCCTATCAA ATTTGACAAC AAATATTACG GTAATCTGAA AATACAAAAA GGACTTCTCC ACTCCGACCA GCAGCTGTTT AATGGAGGTT CTACAGATTC TCAGGTTACT  GCCTACAGCA CCAACCAAAA CAGCTTCTTT ACAGACTTTG CAGCTGCCAT GGTAAAGATG AGTAATATCA GCCCTCTCAC TGGTACTAGC GGGCAAATCC GCAAAAACTG CAGGAAGTCC 
AATTAA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGATGATGA GGAATCTATT GTGCATTGGG ATAATGGCTG TGTTTGTATG CTCCATTAAT ATAAATGCTG TGAGTGGGCA GCTGAGCTCA ACGTTTTATG ACAAATCGTG TCCGAGGGCT  CAGTCGATAG TGAAAAGAGT AGTGAAGCAA GCTCTCGCTA AGGAGAAAAG AATGGGGGCG TCCTTGGTCC GCCTTCACTT TCACGATTGC TTCGTCAATG GATGCGATGG TTCGATTCTA  TTGGATGACA ATGCGACGTT TACCGGAGAA AAAACTGCAG GTCCAAACGC CAATTCTGCG AGAGGATTCG ATGTGATAGA CACCATTAAA ACTCAAGTGG AAGCAGCCTG CAGTGGAGTC  GTGTCGTGTG CAGACATTCT CACCATTGCT GCTCGTGATT CTGTTGTTGA ACTTCAAGGC CCAACATGGA CGGTAATGCT GGGAAGGCGA GACTCTACTA CCGCGAGTTT AAGCTCTGCA  AACAACAACA TTCCGTCTCC CGCTTCCAGT CTCAGCGCAC TCATCTCATC TTTTAAAGGT CATGGTCTTT CTACCAAGGA CCTCGTTGCA CTCTCAGGTG CTCATACAAT TGGTCAATCG  CGGTGCGCCT TTTTCAGAAC TCGCATCTAC AACGAATCCA ACATTAACGC TGCCTTCGCT ACATCTGTGA AGGCAAACTG CCCAAGCGCT GGTGGGGACA ACACCCTCTC TCCCTTAGAT  GTGGTAACCC CTATCAAATT TGACAACAAA TATTACGGTA ATCTGAAAAT ACAAAAAGGA CTTCTCCACT CCGACCAGCA GCTGTTTAAT GGAGGTTCTA CAGATTCTCA GGTTACTGCC  TACAGCACCA ACCAAAACAG CTTCTTTACA GACTTTGCAG CTGCCATGGT AAAGATGAGT AATATCAGCC CTCTCACTGG TACTAGCGGG CAAATCCGCA AAAACTGCAG GAAGTCCAAT 
TAA 

Retrieve as FASTA