1. Browse the Database
  2. View Redoxidase
Entry information : BoPrx71-1Cb_other
Entry ID 3195
Creation 2006-09-01 (Christophe Dunand)
Last sequence changes 2006-09-01 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2012-05-10 (Christophe Dunand)
Peroxidase information: BoPrx71-1Cb_other
Name BoPrx71-1Cb_other
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx71-1Cb_other
start..stop		 S start..stop
BnPrx71-2_other 271 6e-90 1..140 1..139
BnPrx71-2_other 124 1.87e-33 265..327 265..327
BrPrx71-1Ab_other 251 1.62e-82 1..140 1..131
BrPrx71-1Ab_other 125 1.38e-33 265..327 257..319
BoPrx71-1Ca_other 246 3.8e-82 1..140 1..140
BrPrx71-1Aa_other 251 3.97e-82 1..140 1..140
BrPrx71-1Aa_other 127 1.85e-34 265..327 266..328
Literature and cross-references BoPrx71-1Cb_other
Literature Ayele,M., Haas,B.J., Kumar,N., Wu,H., Xiao,Y., Van Aken,S., Utterback,T.R., Wortman,J.R., White,O.R. and Town,C.D. Whole genome shotgun sequencing of Brassica oleracea and its application to gene discovery and annotation in Arabidopsis. Genome Res. 15 (4), 487-495 (2005)
DNA ref. GenBank:   17795977
Protein sequence: BoPrx71-1Cb_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327 (304)
PWM (Da):   %s   21813.1 (19275.8)  
PI (pH):   %s   8.51 (8.39) Peptide Signal:   %s   cut: 24 range:24-327
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSLVRSVCLF ITFLSYLAIS VHGQATARPG AGSGTRVGFY STTCPTAETI VRNAVTAGFN SNPRIAPGIL RMHFHDCFVL GCDGSILISG ANTEQTARSN VNLRGFDIID NAKTQLEAAC  PGVVSCADIL ALAARDSVVL VSFTxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx 
xxxxxxxxxx xxxxxxxxxx xxxxGRGVLQ SDQVLWTDPA TRPIVQQLMS PRSTFNADFA RAMVRMSNIG VLTAASGEIR RVCSAVN 

Retrieve as FASTA  
Remarks Partial sequence from 3 GSS (exon 1 and 2, intron 2 without intron 1: BH544196, part of the exon 4: BH965480 CC951710).