Entry information : MmEPO
Entry ID 3346
Creation 2006-07-18 (Christophe Dunand)
Last sequence changes 2010-11-26 (Myriam Duval)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-12-28 (Christophe Dunand)
Peroxidase information: MmEPO
Name MmEPO
Class Eosinophil peroxidase    [Orthogroup: EPO001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Muridae Mus
Organism Mus musculus (house mouse)    [TaxId: 10090 ]
Cellular localisation Apoplastic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MmEPO
start..stop
S start..stop
RnoEPO 1365 0 2..716 1..715
PtroEPO 1324 0 2..715 1..714
MmulEPO 1323 0 2..716 1..715
GgoEPO 1323 0 2..715 1..714
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '3346' 'complement(join(87680903..87681101,87681599..87681836,87684745..87684915,87685441..87685696,87686015..87686175,87687495..87687813,87688783..87688989,87690467..87690596,87690681..87690798,87690977..87691152,87691316..87691409,87691530..87691608))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 87691530..87691608 77 N° 2 87691316..87691409 92 N° 3 87690977..87691152 174 N° 4 87690681..87690798 116
N° 5 87690467..87690596 128 N° 6 87688783..87688989 205 N° 7 87687495..87687813 317 N° 8 87686015..87686175 159
N° 9 87685441..87685696 254 N° 10 87684745..87684915 169 N° 11 87681599..87681836 236 N° 12 87680903..87681101 197
complement(join(87680903..87681101,87681599..87681836,87684745..87684915,8768544 1..87685696,87686015..87686175,87687495..87687813,87688783..87688989,87690467..8 7690596,87690681..87690798,87690977..87691152,87691316..87691409,87691530..87691 608))


exon

Literature and cross-references MmEPO
Literature Horton M.A., Larson K.A., Lee J.J., Lee N.A. Cloning of the murine eosinophil peroxidase gene (mEPO): characterization of a conserved subgroup of mammalian hematopoietic peroxidases. J. Leukoc. Biol. 60:285-294(1996).
Protein ref. UniProtKB:   P49290
DNA ref. GenBank:   NC_000077 (87680903..87691609)
Cluster/Prediction ref. UniGene:   Mm.1315
Protein sequence: MmEPO
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   716 (693)
PWM (Da):   %s   81200.42 (78797.1) Transmb domain:   %s   i12-34o
PI (pH):   %s   10.91 (10.95) Peptide Signal:   %s   cut: 24 range:24-716
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MMQQLLALVGALATLILTQHAEGTAPASPSPVEISVLRDCIAEAKLLVDTAYNHTQKSIMQRLRSGSASPMDLLAYFKQPVAATRRVVQAADYMHVALGLLEERLQPRGSRPFNADVLTEPQLRLLSQASGCALQDQAERCSNKYR
TITGRCNN
KKHPWLGASNQALARWLPAEYEDHRSLPFGWTPGKRRNGFLLPVRDVSNQIVRFPSKKLTSDRGRALMFMQWGQFIDHDLDFSPESPARVAFSMGVDCEKTCAQLPPCFPIKIPRNDPRIKNQRDCIPFFRSAPACPQNRNKVRNQINALTSFVDASMVYGSEVTLALRLRNRTNFLGLLATNQRFQDNGRALLPFDNLHEDPCLLTNRSARIPCFLAGDTRSSETPKLTAL
HTLFVREHNRLAAELRRLNPHWSGDKLYNEARKIVGAMV
IITYRDFLPLVLGRARIRRTLGPYRGYCSNVDPRVANVFTLAFRFGHTMLQPFMFRLDSQYRASAPNSHVPLSSVFFASWR
IIHE
GGIDPILRGLMATPAKLNRQDSMLVDELRDKLFQQVRRIGLDLAALNMQRSRDHGLPGYNAWRRFCGLSQPRNLAQLSRVLKNQDLARKFLRLYKTPDNIDIWVGAIAEPLLPGAR
VGPLLACLFENQFRRARDGD
RFWWQKWGVFTKRQRKALRRISLSRIVCDNTGITTVSRDIFRANIYPQGFVSCSRIPKLNLSAWRG

Retrieve as FASTA  
Remarks Complete sequence from genomic (Chromo 11, 11 introns), 11 cDNA and 45 ESTs.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATGCAGCAGCTTCTGGCCCTGGTAGGGGCCTTAGCCACACTCATCCTCACCCAACACGCTGAAGGCACTGCCCCAGGTAGGAGACTGTTAGGTACCAAGGCAGAAGATTGGTCTAAA
GCAAGGATGTGGAGGGAAAACACTTGGATATAGGGAGTCTGTGGTTTCTCTGGTTACTGAGTCTCCATCTTTTGAACAGCTCTTCCCCCAGTCCAGTGGAGATTTCAGTCCTTCGAGACT
GCATAGCAGAGGCTAAGCTGCTGGTGGACACTGCCTACAATCACACACAGAAAAG
GTGAGCCTGGGACTGGGAAGGTCAGTGAGGGAGGACGGGCTCTGGGCAAAATCATCTTACCCAAC
CTGAACCCCAAGAACTATGGGTCTCCCTGCTGGGCTGAGAATTTATGGTTAGCCTGCACCCTCCTCCAGCTTCCTCTTTCTCCTCCTCTTTGGGACAGCACATCATGCAACGTCTTCGCA
GTGGCTCGGCCAGCCCCATGGACCTCCTGGCCTACTTCAAACAGCCAGTAGCAGCCACCAGAAGAGTGGTTCAGGCCGCTGATTATATGCATGTGGCCTTAGGGCTGCTAGAAGAGAGGC
TGCAGCCACGGGGATCTAGACCCTTCAATGCCACTG
GTACTCTCTTTCCTGCTGAGTCCCTAAGGCCTGCCCTAGCCTGGGAATAGAGGAAAGCCAGATGTGGGAGGTGGGGTGAGAAGC
CTAGGGGATGTTAGAGATGACAAAGGGGTGGAACTGAACAGCCCAGGTAAGAGATAGGACTCTGGACTCAGAACCCTGCCTCCCTCCTCCCCAGATATGTGCTCACAGAACCACAGCTGC
GCCTGCTGTCCCAGGCCAGTGGCTGTGCTCTCCAGGACCAGGCTGAGAGGTGCAGCAACAAGTACCGAACCATAACAGGGAGATGCAACAACAA
GTGAGTGTTGGGACCCTGCCTCTGCT
CTACACCCCCTCTCTCAGGTCCTACACCCTACTAACACCCACCTATTCATTACCCCAGGAGAAGCATCCCTGGCTGGGAGCCTCCAACCAGGCCCTGGCCCGCTGGCTGCCAGCTGAGTA
TGAAGACCACAGGTCTCTCCCCTTTGGCTGGACCCCTGGAAAGAGGCGTAATGGCTTCCTGCTTCCTCTT
GTGAGTCGGAGTGAAGGGTCTAGAAAATGCTTGCTCTCTTTTAAATACAG
AAGGTAAAGACAGCCCTGAGTTGTCACAGGCAAGGCTCAGCTCCAGGCTCTCCTCCCCCTGAGTGGCTGAGCGACTGTGGGTAGAGAATATACTTACCTTCTGAGACCAGTTTCTTCACC
TGTGAATCGAAAAATCTAGAGTGTGTGTGAATGAAAGTGAAGTTCTTGGCTTAAACAGCTGTGTAGACCACGATCCCTTAATGTTACCTACTATGGAATAGAGTTGCTTTATGGTTCTTG
TGAGAGGACATCTCTCCCCATCTCTCTATTTCCCTCCTTCCTCTCTCTTCTTCTCTCTCCCCTCACCCCATGTATGTGTGTATGTACCTGTGCGTGTGTGTCATACGTGTGTACAAGTGT
GCACACGTTTGTGGAGGCCAGAGGCAGATGCTGGATGTCTTCCTTGGCTGATTGCCGCCATCATATTTTTTGACAAGGTCTCTCACCCATCCTGAAGTTTGCAATTTTGTGGAAGCTGGC
TGGCCAGTGAGCTACCAGGACTGGCCTGTCTCTGCCCTCAATGCATGGGTTACAGGCATGCGTAGCAATGCTTGGCTTCTGTGTAGGTCCTAGGGATTTGAATTCAGGTCATAGCAAGTA
TTCCTACCCACTAAGTCATCCTCCAGTCCCTCTGTTTTATGCCTTGTGTCTATAGTCTAGACTGGTCCAAATTTAGGATGAAACTCAGGCTGATCTCAAACTCACAGCAATCCTCCTGTC
TCTGCTTCCCAGGGCTGGGATTATAGCCATGAGACTCTACGTTCAGGTCAAAGTATTTCGCTAAATATAAAGAGCCATGCACCTGTGTGCCCATGATTTGCAATCTCACAATATCAACTT
TCTTTTGATATGTTAATATAACAATCTCCCACCTGCCTTAATATTAGTGATAAATTTTACCCTACTGACCCTTCCATCTGTCTACCCAGATCTCTACTTATTATCTGTCACCTTGAAATC
AGTCCTGTTTCTGAAGATCACCAGTTCTATAATCTGTGTCTACATATTAATATGTTTCTATCTCTCTGGCTGTGTGTACATATTAACATGTTTCTATCTCTCTGGATCAGCTGGTGGAGG
GAATCTGCTGATCTGGGCCAGCCTCCTCACACTTGTTGATTTATGATCTTTCTGTGTAGTTCAGATTGGCATGTAACTCACTATTTAACAGACTGGCCCTGAATTTACAATCCTCCTGCC
TCAACCTCCCAAATCCTGGGATTCTAGGCATGTGCCACCAGCAACCTCAAGCCAAGCTGGCAGACCATTGGGGCTGCATCTCTAACAACAGAAGAAGTGCCAGGAGGAGAGGGTGGATGG
GAGAGAGACAGCTCTGGCAGGAGTTGGCATCCCCTGAGTCCCGGTTGGTCTTAGTACCTGGCCCTGACGGAGAGCCCAGACTCATGCCGACTGTACTTCCCTACCAGGTGTCCGGGATGT
CTCCAATCAGATTGTGCGCTTCCCCAGCAAGAAACTGACCTCAGACCGCGGCCGGGCCCTTATGTTCATGCAGTGGGGCCAGTTCATCGACCATGACCTGGACTTCTCCCCGGAGTCCCC
AGCCAGAGTGGCCTTCAGCATGGGTGTGGACTGTGAGAAGACCTGTGCCCAGCTGCCCCCCTGCTTCCCCATCAAG
GTCCCTCAGCCAGCCTTCTAGGTTTCTGGGGTAGCTTCCAGCCC
AGAAAGAGGGGTGCCAGAGAAATAAGCCCCATTCAGAGACCACAGATGCCCCCTGTGGTGCATGGTGGAGGGGTGGGGGGGATGGGTAGGCTTTATTGGAGTTTCATGGGGGAGATATAT
GAGGCAGGCCTTGACCCATTGGACTGACTCCAGCAGAGGAAGTCTCTGGGCCCTCCTTTTAGAACCTATTAAAAGCTCTTCCTGGGTTGGTGCAGTCCAAGAACCCTGCAATTCTTGCCA
ACTCTGGTTTGGGGGCTGTTAGCAGGGTCTTCCTCCAAACAAGGATACTGTAGGGCACTAGGTGAGAAGATGCAGAATTCAGGAAGTTGATTCGATTTGGGGAAGGGAGGGGCATGAGTA
TCCACATGCACATCCACACGCACATCCACAATCAGACATATTCACACACTCACACACTCACACACAGACAGACACACATTCACCTACAGGTTTGCTTCCTTGCGTGGGTAGGGAAGGAGG
CACTCAGAAGGGGTTGTATGTTACAAACCCCCTTTCCTCCCTCAGAAGGGGTTGTATGTTACAAACCCCCTTTCCTCCCACCTTGGTGCCGGGGTGCCTCCTCTGGAGCTTGCCAGGTCT
TTACAACACAGTGTTAGCGTTCGGATTGTACGTCAGGCATAGCAAATGCTACCTCCACCGAGTGTTGCTCAACTGCTTGGGCAACAACCTATCTCTCGGAGGGTCAGTCTCTCTCCTCCA
ATTAGATGAAGGTCTTCATTTTAAAAGCTTCCTCGAGGGTAAGGGGTTCATCTCAGGGGTAGAGCGCTTGCCTAGCAGGCACAAAACCCCAGGTTTAGGTCTGGGTAAGTCTTGGAGGGC
TTCCTGGGGTAGGGAAGCTTTGAGCAATGTCAGAGTGAGCCTGCTCCAGAGGGGCCCCAGAGTCACTGAGAGCTCTTCACCCTAGATATCCCACGCAATGATCCCCGCATCAAGAACCAG
CGCGACTGCATCCCCTTCTTCCGCTCTGCCCCGGCGTGCCCCCAAAACAGGAACAAAGTCCGCAACCAGATCAACGCACTTACATCCTTCGTGGACGCCAGCATGGTGTATGGCAGCGAG
GTGACCCTCGCCCTGCGGCTCCGTAATAGGACCAACTTCCTGGGGCTGCTGGCCACGAACCAGCGATTCCAGGACAACGGTCGAGCCCTACTGCCTTTTGACAACCTGCATGAGGACCCC
TGTCTCCTGACTAACCGCTCTGCACGCATCCCCTGCTTCCTGGCAG
GTCAGTCTACAGAGGAGTCGTCCCAGGAGGGAGGGGCATGATGGGGGTGTGGTGAGGAGACATTAGTGATGACC
TCAGGAGACCCACAGGATAGAGACCCTCAGCATGGGGGGGGGACACACCTTAGGTACAGATCTGTGCAGTCATTGGGAAACCTAGTACATGGGAAGTGCCTATCCCTTGGCTGTGACCAG
ATGTCCCTGTTTCATTGTCTCCAGTGACAAGGCTCTCATTACCTGAATATCACTCCAGCCAACTACAGGAGTGGTCCCTCTTAAGTATCTGCCCATTGCTCCTAGTCATGGTCCAGAGAC
CCAAGTGAACTCAATTTTTTCTCCTTTAGGCTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACTCACACACGTGTGTTTTGTGCCTTCCTTCTGGTTACACAGTTCTG
CATCTATGAGTCCCTCCATCCCTTCTGCTGTTTAGTTTGCATTCTATTCATAGTCCTTACCCCAGCCTTCCTGTGTGGTTATGATAATGACAGTAATCACTTCTGGGCCATGCCTGAACC
TTCATAGCCGCCCTGAAAGGTGAGAAATATCATCCTCTGTTCACAGATCTGAGGTTGAGGCTGAGGGAAGATGGGTATGCTCCAGAGAGCAGCGCTCTGAGGGCAGAGCCTATCCTGGGA
CAAAGTCACTGTAACTCCTGGGTCTCTGCTCTGTCCATTTCACCTCTCTGCTTAACTAAAACTCACTCTATAAGGATTGCACAGCCATATATTCTGGGGGAGCAGCATGTACCTTCACCA
AAGGCCTCCAGAAGCTTAGTCCAAACAAGACTGTGGGGGCTGGGTGGGAAGCCATTGGGTGGCTGAACTCAGTGTCCTTGCCTACTTATGGGAAAGGTCTGAGTACAGAAATGTGCTCTG
CCCAATGTCCCCGCCTCCTGGATTCCTGGGAAGAGCACTAGGATATCAAATTCAAACTGGGAACTGGAAGAGAGAGAGCCCCTGGTGGAGAAACAGATGCAGGCAGGGACTTGTAGTCTC
AAGGTCATGGCCCCAGGGTCATCTCCCCACAGAGTGTGGTCTGAGCTATGGGTCTAGTCTTCTTGTAGAAGAGAGCCACCAGGCAAGAAGATCAGCATCTGCCCTGTGTGTCTCACTTAG
TTCTAACCTGCCCTGGGAAGGAAGGTGACTGTGGGTAGGGAGCCGCATGAGACGTAGACGGAAGCCTAGCTTAGGAAGTTTGCCTCACCTGGTCTCTGGGACCCAGACCTCAGTCTTTCC
TTACCAAAAGAGACTCTTATAATCTTGAACTTGGGGGTTTTCAAGGTGTGACACTCGGTCAAGTGAAACCCCCAAACTGACGGCCTTGCACACGCTGTTTGTGAGAGAACACAATCGCCT
AGCCGCTGAGCTGAGGCGCCTGAATCCCCACTGGAGTGGAGACAAGCTGTACAACGAAGCCCGGAAGATCGTGGGAGCCATGGTCCAG
GTAGGGAGCCCAGAGGCCAGCATGAATCTGAG
GGGGTGGTTCCCAGCCTTTGAGAACATGGCTTTGAGGCTGTACCCTAAGGCTGCTGAGTCTGGATACTTGGGGTGCATCTCTACTTCTGGTTCCAAAATTAACCAGGACCCCATCTATGA
CATTTCTTTTGATTCCAGTATCTCATCCTCCAATGGGAGATTAATGCTGCCACACTTGGCACAATGACAGCCATCACTAGTGTGCCCGAGGAGCCTTTTGAACAGCAGAGGAGAGGGAGG
GCTGCAGGCCGCTCGGGCAACACTCTTCCCGTTCCATTTCTTCCAGATATCATCACCTACCGAGACTTCCTGCCTCTGGTTCTGGGCAGGGCCCGGATCAGAAGAACTTTGGGTCCCTAC
AGAGGGTATTGCTCCAATGTGGACCCCCGTGTAGCCAATGTTTTCACCCTGGCCTTCCGCTTTGGCCACACCATGCTTCAGCCCTTCATGTTCCGCCTGGATAGCCAGTATCGGGCCTCG
GCACCCAACTCCCACGTCCCGCTTAGCTCTGTATTCTTTGCCAGCTGGCGAATCATACATGAAG
GTGACTGGGTTTTCCAAAGGCAAGGGGGGAGGGTCCAAGCACCCCTTCCCAGGTGG
GCTGTTGTCTGCTGGTCCGGCCTCTGCAAACACCTTCTCAGGATAGTGGAAAGATGGCAGCCATCAGTGAGTCTCTCATGCCCTAAGGGAGGAGTCCCCCTCTTTTCTGCCTCACGCACT
GGGAATTAAACCCAGGCCTTGTGCACGCTAGGCAAGTGATCTACCGTTAAAGTGTTTCCCCTCCCCTTTTACTTTTTAAATTTTATATAAGGGCTTTACAAAAATAGCTAAGGCTGGCCT
TGAACTTGTGATTGTCCTGCCTCAGCCTCCTGAGTAGCTAGGATTATCATCGTATCTATAACACCTGGCCTGATAAAGGGGGTTTCCTAAGCAGGGGGCGGGGCAGACTGATGTCAGAGC
GGTAAGTCATGGACCTGCAAGGAGCCCCACTTGCTGGCTGAGCATCGTGGGATGACCTCAGGAGCCTCTAAGAGGCGGGCCAACGCTTCCTTCCGTTTTGTGAAACCAGGTGTGGCATCG
ACCCTATCCTCCGAGGTCTCATGGCCACCCCAGCTAAGCTGAACCGGCAGGATTCCATGCTGGTGGATGAGCTCCGCGACAAGCTGTTTCAGCAAGTGAGAAGGATCGGGCTGGATCTGG
CAGCTCTGAACATGCAGCGCAGCCGGGACCACGGCCTTCCAG
GTGACGGGGCGCCTCACGTAGGACCGTTTTGGGGGTTTGGAGCAGACCTGGACCCTCCCTTATGACAGGAACAAGATA
GCAGTGCAGAGCAGGCAAGACCTATGCGGATGCAGCAAAGCGCCCCTCCCCCCAATCCCACACTTGCTGGCTCCTCAGGTCACCCCTATCTGCTATAGATAGGCTTTAGGCTTTACGTTC
TATCTGCTATAGGGGCCCCGGCTTTAGGTTCACCCCAGGACTAGGTCAGGGGACGAGGAGGTGAAGGGAAGAGATCAGAACTTTCCAAGCAGAGAAAAGCAATAAATAGCCTTACGGTCA
TCACATGGATGACTGTTCCCCACCTCACTGGCAACTTCAGAGAAGAAGGCTATAAAATTTCTAGGACCAGAGAGAGTGCAGGGCTCTTTGACCTGAGGGTGGAAGGCAGGAGCCAGAGAG
ATGGGGAGCAAGTAGATTAGGATTAAGGCCCCACAGGGCTGTTTGGTGAGGACACCATGGCAGTGTGAAGAGAACGGATGCTCATTTCGTCCCCTTTTTCCAATGACCTTCAGCGGCAGC
GGGCTCAGCCATCATACAGATGGGGAGTAGTCAGAGACAGCTAGTAATCTACTCAAAGTCACGAGAATATGAAATCTGACTTCAAAATGTCTTCATTCTTCCTGGTGTTTGACCCCATTC
AACACCACAAAGAGGCTTCAAGCCTGGTTGGCTTTCTCCCTTCCAACTCCAGCCTTCCTCTCTAGATAGAGCCTGAAGCCCCATGTGTCCTGGCAGAGCCTCACTTGTGTGTCAAGGAGT
CAGAGGCACTTCCTAACTGCCTGCTCTGCTCACTACAGCAATGGACAGCAGGCCTCGAGACATGAGGGCTGCTTTCCCTTTCTTCTTCCTCTCCCCCCCCCTATGTACATGTCAGTGGGG
CTCACATGGAAGCTAGAGGCGAATCTCAGGTGTTATCCCACAGCTGCCCTCTACCATGTATGTATGTATGTATGTATGTATGTATGTTTGTACATATGTATGTATATATTTTATTTGCTA
GTTTCTTTTTTTTTTTTTTTCCAAGACATGGTCTCTGTATAGATCTAGCTGTCCTGGAATTAACTCTGTAGACCAGGCTGGCTTTGAACTCAGAGATCCACCTCCCTCTGCCCCCTCCCC
CACAAAGTGTTGGGATTAAAGGTGTGGGCCACCATTGCTCAGCTCTACCTTGTATTTTTGAGGCAGGGTCTCTCACTGACCTGGAGGTCACCATGCAGGTTGAGCTGAGTTATCAGCAAA
TCCTAAACCTGCTTACCTCTGTCTCTCTCCAGCACTAGGGCTTTAAGTGTGCATGATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACCTGAGTTCTGGAAATCCAATTCAAGA
GGTCCTTATGCTTGTGTGACAAGCAGGGTCAGTTCCCTGGTAGTCTTACACAAGGAGCTGTTGTTGCCCCCTGCTGGAAGGCTGGCATTGCTAGCCACTCAAAATTGTCACACTGTAACT
TTTTTTTTCCATTTTTTATTAGGTATTTAGCTCATTTACACTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCCCCACTCCCCTACCCACCCACTCCCCCTTTTTGGCCCTGG
CGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTG
GTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTTCTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATCCATCCATTAGCTGACTGTGAGCATCCA
CTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCGATAAAATCTTGCTAGTGTATGCAACACTGTAACTTTCTATTCCCCATAAACAGCTGTT
CCCTATAGCCCATTTCAGAAATACTATCCCGAATCTGGCCTTTGCAGTCTCCTCTAGCCCCTTCCCCAGCCAACAGCAAATCTAGAATTGAACTGCCTGCTTTGAACTCCACTTAGTAGA
CCTTGAACAGCCGATGATTAGATAGACTTTACATTCTGCAGGTTGCTTCACAGAGGCACTGTGACTTCTTGAGAGGCACATAACACTTAGTGATAAGAGAACGTTTTCCTTAGCTGCCTG
CAACACCGTGTTTGAAATTGTTGTTTATTTTCTCATTCAGTCATTCCTTCACATAGTCTTCAAATCTGATTTTTAAGAATGCTCTGAGCAGTGTGCCTATAGAATGTCTATGAACCCAAT
AATAATATTAAATGTCAGATCTGTGGGGCTCAGAGTTAGTAAAAGGATTGTTTGCCTTGCAAGCATGAGGATCTGAGATCATTTCCAATGAACCACTTTTTGAAAATGCCAGGCTTAGGT
GGCATACTTTTGTAATCCCAGTGCTTGGGAGACAGAGACAGGCAGAAACCTGCGGTTCTCTGGCTGGCCACCCTAACTTGATGAGTTCCAGGCAAGTTAAAAAAAAAAAAAAAGAGGTAG
TGTCTAGCAAATGACATCTAGTGTTGACCTTTGACCTCTATATCCACGCACACCCCCACAATATGTAAGCACACACACATCAAATCTATGTCTATGGGCTTTGAACATCAGGACACACTC
CTCAGCCCAACACACACAAAACAAGACTGTCCACCTACAGTCTAGTGAGGGCAGTGATCTAGTGTTCAGACCTCAGGGATCGTCTGGTGCCACCTAGTACTGAGCACCGAATATACTCTG
GAGGGACTGTGGGGAGCAGCAGAAGCTGATGGGAGACTGACAGCATGGCTCTGACTGGGCTTCCCTGCAGGAGATACAATGCCTGGAGACGCTTCTGTGGGCTTTCCCAGCCCCGAAACT
TGGCCCAGCTTAGTCGGGTGCTAAAAAATCAGGATTTGGCAAGGAAGTTTCTGAGACTGTACAAGACGCCCGACAACATTGACATCTGGGTCGGAGCCATTGCGGAGCCTCTCCTGCCGG
GGGCCCGAGTGGGGCCGCTTCTGGCTTGTCTTTTTGAGAACCAGTTCAGGAGAGCCAGAGATGGAGACAG
GTAAGTGATCCGCAGCCTAAAATAACCCAGCATCAGGATACGGCATCGAG
AGGCTGGACGATGGGGAAAGCATTCTTTAAAGCTTCTTTTCTCCTGAGCTAAGGGGACCTGAGGCCAGGAGGCTTCCCCATGCAAAGTGGGTCTGTGGGAAAGAAATGCTGCCCCAGGCA
AGATCGGAGCCTCCATAGGCCAGAACGGCGACTGGCCAACCTCCATGTTCTATGCTAGCGGACCCCAGAAGATGTGGGCAGAAAGGGTTAAACCTGAGCTTGTGGCTTAAGACCTGACTC
CTTATCTGAATGTGGCATACGCTTGAGTTCAAGTCCGTCCCTGGCCACCTAGATTGGTGTATACTTACTTCTGGGCAGTTCACTTATGTATGGAACTGGTAAGATTATGGAAAGCGGACG
AGATAGAGCGCCCGGGGGTCAGACACAAGCATGGTGCTCACTGCATAGCAACTCTCCAACCTTCTCACGCCTCTCTTTGACCCATAGATATTCTGGTGGCAGAAATGGGGAGTTTTCACC
AAAAGACAACGCAAAGCCCTGAGGCGAATCTCTTTATCTCGGATTGTATGCGACAATACTGGCATCACCACGGTTTCGAGGGACATCTTCAGGGCTAACATCTACCCACAGGGTTTTGTG
AGCTGTAGCCGTATTCCCAAGTTGAACCTATCAGCCTGGCGAGGCAAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATGCAGCAGCTTCTGGCCCTGGTAGGGGCCTTAGCCACACTCATCCTCACCCAACACGCTGAAGGCACTGCCCCAGCTTCCCCCAGTCCAGTGGAGATTTCAGTCCTTCGAGACTGC
ATAGCAGAGGCTAAGCTGCTGGTGGACACTGCCTACAATCACACACAGAAAAG
CATCATGCAACGTCTTCGCAGTGGCTCGGCCAGCCCCATGGACCTCCTGGCCTACTTCAAACAGCCA
GTAGCAGCCACCAGAAGAGTGGTTCAGGCCGCTGATTATATGCATGTGGCCTTAGGGCTGCTAGAAGAGAGGCTGCAGCCACGGGGATCTAGACCCTTCAATGCCACTG
ATGTGCTCACA
GAACCACAGCTGCGCCTGCTGTCCCAGGCCAGTGGCTGTGCTCTCCAGGACCAGGCTGAGAGGTGCAGCAACAAGTACCGAACCATAACAGGGAGATGCAACAACAA
GAAGCATCCCTGG
CTGGGAGCCTCCAACCAGGCCCTGGCCCGCTGGCTGCCAGCTGAGTATGAAGACCACAGGTCTCTCCCCTTTGGCTGGACCCCTGGAAAGAGGCGTAATGGCTTCCTGCTTCCTCTT
GTC
CGGGATGTCTCCAATCAGATTGTGCGCTTCCCCAGCAAGAAACTGACCTCAGACCGCGGCCGGGCCCTTATGTTCATGCAGTGGGGCCAGTTCATCGACCATGACCTGGACTTCTCCCCG
GAGTCCCCAGCCAGAGTGGCCTTCAGCATGGGTGTGGACTGTGAGAAGACCTGTGCCCAGCTGCCCCCCTGCTTCCCCATCAAG
ATCCCACGCAATGATCCCCGCATCAAGAACCAGCGC
GACTGCATCCCCTTCTTCCGCTCTGCCCCGGCGTGCCCCCAAAACAGGAACAAAGTCCGCAACCAGATCAACGCACTTACATCCTTCGTGGACGCCAGCATGGTGTATGGCAGCGAGGTG
ACCCTCGCCCTGCGGCTCCGTAATAGGACCAACTTCCTGGGGCTGCTGGCCACGAACCAGCGATTCCAGGACAACGGTCGAGCCCTACTGCCTTTTGACAACCTGCATGAGGACCCCTGT
CTCCTGACTAACCGCTCTGCACGCATCCCCTGCTTCCTGGCAG
GTGACACTCGGTCAAGTGAAACCCCCAAACTGACGGCCTTGCACACGCTGTTTGTGAGAGAACACAATCGCCTAGCC
GCTGAGCTGAGGCGCCTGAATCCCCACTGGAGTGGAGACAAGCTGTACAACGAAGCCCGGAAGATCGTGGGAGCCATGGTCCAG
ATCATCACCTACCGAGACTTCCTGCCTCTGGTTCTG
GGCAGGGCCCGGATCAGAAGAACTTTGGGTCCCTACAGAGGGTATTGCTCCAATGTGGACCCCCGTGTAGCCAATGTTTTCACCCTGGCCTTCCGCTTTGGCCACACCATGCTTCAGCCC
TTCATGTTCCGCCTGGATAGCCAGTATCGGGCCTCGGCACCCAACTCCCACGTCCCGCTTAGCTCTGTATTCTTTGCCAGCTGGCGAATCATACATGAAG
GTGGCATCGACCCTATCCTC
CGAGGTCTCATGGCCACCCCAGCTAAGCTGAACCGGCAGGATTCCATGCTGGTGGATGAGCTCCGCGACAAGCTGTTTCAGCAAGTGAGAAGGATCGGGCTGGATCTGGCAGCTCTGAAC
ATGCAGCGCAGCCGGGACCACGGCCTTCCAG
GATACAATGCCTGGAGACGCTTCTGTGGGCTTTCCCAGCCCCGAAACTTGGCCCAGCTTAGTCGGGTGCTAAAAAATCAGGATTTGGCA
AGGAAGTTTCTGAGACTGTACAAGACGCCCGACAACATTGACATCTGGGTCGGAGCCATTGCGGAGCCTCTCCTGCCGGGGGCCCGAGTGGGGCCGCTTCTGGCTTGTCTTTTTGAGAAC
CAGTTCAGGAGAGCCAGAGATGGAGACAG
ATTCTGGTGGCAGAAATGGGGAGTTTTCACCAAAAGACAACGCAAAGCCCTGAGGCGAATCTCTTTATCTCGGATTGTATGCGACAATACT
GGCATCACCACGGTTTCGAGGGACATCTTCAGGGCTAACATCTACCCACAGGGTTTTGTGAGCTGTAGCCGTATTCCCAAGTTGAACCTATCAGCCTGGCGAGGCAAA

Retrieve as FASTA